RNA–Protein interactions for RNA: ENST00000613104.1

ATF3-210, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene ATF3, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-210ENST00000613104 RRP7AQ9Y3A4 280 aaKnown RBP12.25□□□□□ -0.45
ATF3-210ENST00000613104 ITGB4P16144 1822 aa12.25□□□□□ -0.45
ATF3-210ENST00000613104 MRC1P22897 1456 aa12.24□□□□□ -0.45
ATF3-210ENST00000613104 LMOD3Q0VAK6 560 aa12.24□□□□□ -0.45
ATF3-210ENST00000613104 CCDC27Q2M243 656 aa12.24□□□□□ -0.45
ATF3-210ENST00000613104 FAM196AQ6ZSG2 479 aa12.24□□□□□ -0.45
ATF3-210ENST00000613104 IL17REQ8NFR9 667 aa12.24□□□□□ -0.45
ATF3-210ENST00000613104 CEMIPQ8WUJ3 1361 aa12.24□□□□□ -0.45
ATF3-210ENST00000613104 LGR6Q9HBX8 967 aa12.24□□□□□ -0.45
ATF3-210ENST00000613104 TRIM35Q9UPQ4 493 aa12.24□□□□□ -0.45
ATF3-210ENST00000613104 SIPA1L3O60292 1781 aaPredicted RBP12.23□□□□□ -0.45
ATF3-210ENST00000613104 NHSQ6T4R5 1651 aa12.23□□□□□ -0.45
ATF3-210ENST00000613104 NEUROD2Q15784 382 aa12.23□□□□□ -0.45
ATF3-210ENST00000613104 FAM182BQ5T319 152 aa12.23□□□□□ -0.45
ATF3-210ENST00000613104 MPRIPQ6WCQ1 1025 aa12.23□□□□□ -0.45
ATF3-210ENST00000613104 RTF1Q92541 710 aaKnown RBP12.23□□□□□ -0.45
ATF3-210ENST00000613104 ERVV-2B6SEH9 535 aa12.22□□□□□ -0.45
ATF3-210ENST00000613104 DCTN1Q14203 1278 aa12.22□□□□□ -0.45
ATF3-210ENST00000613104 MCM10Q7L590 875 aa12.21□□□□□ -0.45
ATF3-210ENST00000613104 ZNF521Q96K83 1311 aa12.2□□□□□ -0.46
ATF3-210ENST00000613104 SENP3-EIF4A1A0A087X0R7 540 aa12.2□□□□□ -0.46
ATF3-210ENST00000613104 WWC1Q8IX03 1113 aa12.2□□□□□ -0.46
ATF3-210ENST00000613104 SLC52A2Q9HAB3 445 aa12.2□□□□□ -0.46
ATF3-210ENST00000613104 RTN4Q9NQC3 1192 aaKnown RBP12.2□□□□□ -0.46
ATF3-210ENST00000613104 KAT6BQ8WYB5 2073 aa12.2□□□□□ -0.46
ATF3-210ENST00000613104 PRIM1P49642 420 aaKnown RBP12.19□□□□□ -0.46
ATF3-210ENST00000613104 ACSBG1Q96GR2 724 aa12.19□□□□□ -0.46
ATF3-210ENST00000613104 THUMPD2Q9BTF0 503 aaKnown RBP12.19□□□□□ -0.46
ATF3-210ENST00000613104 PAPPAQ13219 1627 aa12.19□□□□□ -0.46
ATF3-210ENST00000613104 BTAF1O14981 1849 aa12.18□□□□□ -0.46
ATF3-210ENST00000613104 TNS1Q9HBL0 1735 aaKnown RBP12.18□□□□□ -0.46
ATF3-210ENST00000613104 KCNQ2O43526 872 aa12.18□□□□□ -0.46
ATF3-210ENST00000613104 CABP4P57796 275 aa12.18□□□□□ -0.46
ATF3-210ENST00000613104 HNRNPUQ00839 825 aaKnown RBP eCLIP12.18□□□□□ -0.46
ATF3-210ENST00000613104 WDR63Q8IWG1 891 aa12.18□□□□□ -0.46
ATF3-210ENST00000613104 PROM2Q8N271 834 aa12.18□□□□□ -0.46
ATF3-210ENST00000613104 PIGBQ92521 554 aa12.18□□□□□ -0.46
ATF3-210ENST00000613104 BCL11BQ9C0K0 894 aaPredicted RBP12.18□□□□□ -0.46
ATF3-210ENST00000613104 SALL2Q9Y467 1007 aaPredicted RBP12.18□□□□□ -0.46
ATF3-210ENST00000613104 CALD1Q05682 793 aaKnown RBP12.17□□□□□ -0.46
ATF3-210ENST00000613104 TEFQ10587 303 aa12.17□□□□□ -0.46
ATF3-210ENST00000613104 TAF7Q15545 349 aaPredicted RBP12.17□□□□□ -0.46
ATF3-210ENST00000613104 PTF1AQ7RTS3 328 aa12.17□□□□□ -0.46
ATF3-210ENST00000613104 NFATC2IPQ8NCF5 419 aa12.17□□□□□ -0.46
ATF3-210ENST00000613104 BABAM1Q9NWV8 329 aa12.17□□□□□ -0.46
ATF3-210ENST00000613104 TMOD3Q9NYL9 352 aa12.17□□□□□ -0.46
ATF3-210ENST00000613104 KDM3BQ7LBC6 1761 aa12.17□□□□□ -0.46
ATF3-210ENST00000613104 IL16Q14005 1332 aa12.16□□□□□ -0.46
ATF3-210ENST00000613104 TRIM37O94972 964 aa12.16□□□□□ -0.46
ATF3-210ENST00000613104 ZNF853P0CG23 659 aa12.16□□□□□ -0.46
ATF3-210ENST00000613104 SYTL4Q96C24 671 aaPredicted RBP12.16□□□□□ -0.46
ATF3-210ENST00000613104 UBR2Q8IWV8 1755 aa12.15□□□□□ -0.46
ATF3-210ENST00000613104 CHL1O00533 1208 aa12.15□□□□□ -0.46
ATF3-210ENST00000613104 CFAP44Q96MT7 982 aa12.15□□□□□ -0.46
ATF3-210ENST00000613104 ZBED9Q6R2W3 1325 aa12.14□□□□□ -0.47
ATF3-210ENST00000613104 BTBD11A6QL63 1104 aa12.14□□□□□ -0.47
ATF3-210ENST00000613104 ATG3Q9NT62 314 aa12.14□□□□□ -0.47
ATF3-210ENST00000613104 IFT57Q9NWB7 429 aa12.14□□□□□ -0.47
ATF3-210ENST00000613104 LY75O60449 1722 aa12.14□□□□□ -0.47
ATF3-210ENST00000613104 RGPD3A6NKT7 1758 aaPredicted RBP12.13□□□□□ -0.47
ATF3-210ENST00000613104 RGPD4Q7Z3J3 1758 aa12.13□□□□□ -0.47
ATF3-210ENST00000613104 GNAI1P63096 354 aa12.13□□□□□ -0.47
ATF3-210ENST00000613104 GOLGA2Q08379 1002 aa12.13□□□□□ -0.47
ATF3-210ENST00000613104 SMARCC1Q92922 1105 aaPredicted RBP12.13□□□□□ -0.47
ATF3-210ENST00000613104 ASAP1Q9ULH1 1129 aa12.13□□□□□ -0.47
ATF3-210ENST00000613104 KCPQ6ZWJ8 1503 aa12.12□□□□□ -0.47
ATF3-210ENST00000613104 SPDYE2BA6NHP3 402 aa12.12□□□□□ -0.47
ATF3-210ENST00000613104 PLSCR1O15162 318 aa12.12□□□□□ -0.47
ATF3-210ENST00000613104 KCNQ3O43525 872 aa12.12□□□□□ -0.47
ATF3-210ENST00000613104 SPDYE6P0CI01 402 aa12.12□□□□□ -0.47
ATF3-210ENST00000613104 SLC39A6Q13433 755 aa12.12□□□□□ -0.47
ATF3-210ENST00000613104 SPDYE2Q495Y8 402 aa12.12□□□□□ -0.47
ATF3-210ENST00000613104 ZNF790Q6PG37 636 aa12.12□□□□□ -0.47
ATF3-210ENST00000613104 CCDC125Q86Z20 511 aa12.12□□□□□ -0.47
ATF3-210ENST00000613104 MIS18AQ9NYP9 233 aa12.12□□□□□ -0.47
ATF3-210ENST00000613104 TSPYL4Q9UJ04 414 aa12.12□□□□□ -0.47
ATF3-210ENST00000613104 ZNF831Q5JPB2 1677 aa12.12□□□□□ -0.47
ATF3-210ENST00000613104 CICQ96RK0 1608 aaPredicted RBP12.11□□□□□ -0.47
ATF3-210ENST00000613104 PALLDQ8WX93 1383 aa12.11□□□□□ -0.47
ATF3-210ENST00000613104 SLFN5Q08AF3 891 aa12.11□□□□□ -0.47
ATF3-210ENST00000613104 MBIPQ9NS73 344 aa12.11□□□□□ -0.47
ATF3-210ENST00000613104 LAS1LQ9Y4W2 734 aaKnown RBP12.11□□□□□ -0.47
ATF3-210ENST00000613104 HEG1Q9ULI3 1381 aa12.1□□□□□ -0.47
ATF3-210ENST00000613104 E9PSI1 815 aa12.1□□□□□ -0.47
ATF3-210ENST00000613104 APBA3O96018 575 aa12.1□□□□□ -0.47
ATF3-210ENST00000613104 EIF4A1P60842 406 aaKnown RBP12.1□□□□□ -0.47
ATF3-210ENST00000613104 TRMT2AQ8IZ69 625 aaKnown RBP12.1□□□□□ -0.47
ATF3-210ENST00000613104 TTC5Q8N0Z6 440 aa12.09□□□□□ -0.47
ATF3-210ENST00000613104 CDCA7LQ96GN5 454 aa12.09□□□□□ -0.47
ATF3-210ENST00000613104 ZNF496Q96IT1 587 aaPredicted RBP12.09□□□□□ -0.47
ATF3-210ENST00000613104 MYH16Q9H6N6 1097 aa12.09□□□□□ -0.47
ATF3-210ENST00000613104 FANCIQ9NVI1 1328 aa12.09□□□□□ -0.47
ATF3-210ENST00000613104 TJP1Q07157 1748 aa12.08□□□□□ -0.47
ATF3-210ENST00000613104 LOC102724428A0A0B4J2F2 783 aa12.08□□□□□ -0.48
ATF3-210ENST00000613104 SIK1P57059 783 aa12.08□□□□□ -0.48
ATF3-210ENST00000613104 SF3B2Q13435 895 aaKnown RBP12.08□□□□□ -0.48
ATF3-210ENST00000613104 VSIG10Q8N0Z9 540 aa12.08□□□□□ -0.48
ATF3-210ENST00000613104 TSR2Q969E8 191 aaKnown RBP12.08□□□□□ -0.48
ATF3-210ENST00000613104 YTHDC1Q96MU7 727 aaKnown RBP12.08□□□□□ -0.48
ATF3-210ENST00000613104 FMNL2Q96PY5 1086 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms