RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 ATICP31939 592 aa12.6□□□□□ -0.39
CNTNAP3B-211ENST00000612828 LNPKQ9C0E8 428 aa12.6□□□□□ -0.39
CNTNAP3B-211ENST00000612828 ZNF219Q9P2Y4 722 aaPredicted RBP12.6□□□□□ -0.39
CNTNAP3B-211ENST00000612828 CCDC172P0C7W6 258 aa12.6□□□□□ -0.39
CNTNAP3B-211ENST00000612828 CCDC63Q8NA47 563 aa12.6□□□□□ -0.39
CNTNAP3B-211ENST00000612828 GTF3C6Q969F1 213 aa12.6□□□□□ -0.39
CNTNAP3B-211ENST00000612828 CCDC102AQ96A19 550 aa12.6□□□□□ -0.39
CNTNAP3B-211ENST00000612828 AIMP1Q12904 312 aaKnown RBP12.6□□□□□ -0.39
CNTNAP3B-211ENST00000612828 BAG1Q99933 345 aaPredicted RBP12.6□□□□□ -0.39
CNTNAP3B-211ENST00000612828 CCDC144CPQ8IYA2 1237 aa12.6□□□□□ -0.39
CNTNAP3B-211ENST00000612828 SDF4Q9BRK5 362 aa12.6□□□□□ -0.39
CNTNAP3B-211ENST00000612828 PRKCSHP14314 528 aaPredicted RBP12.59□□□□□ -0.39
CNTNAP3B-211ENST00000612828 WDR48Q8TAF3 677 aa12.59□□□□□ -0.39
CNTNAP3B-211ENST00000612828 RNF216Q9NWF9 866 aaPredicted RBP12.59□□□□□ -0.39
CNTNAP3B-211ENST00000612828 EIF3AQ14152 1382 aaKnown RBP12.59□□□□□ -0.39
CNTNAP3B-211ENST00000612828 ZBTB16Q05516 673 aa12.59□□□□□ -0.39
CNTNAP3B-211ENST00000612828 SMC6Q96SB8 1091 aa12.59□□□□□ -0.39
CNTNAP3B-211ENST00000612828 IKBKGQ9Y6K9 419 aa12.59□□□□□ -0.39
CNTNAP3B-211ENST00000612828 SYNJ1O43426 1573 aa12.59□□□□□ -0.39
CNTNAP3B-211ENST00000612828 FANCD2Q9BXW9 1451 aa12.59□□□□□ -0.39
CNTNAP3B-211ENST00000612828 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.59□□□□□ -0.39
CNTNAP3B-211ENST00000612828 CFTRP13569 1480 aa12.59□□□□□ -0.39
CNTNAP3B-211ENST00000612828 IFFO1Q0D2I5 559 aa12.59□□□□□ -0.39
CNTNAP3B-211ENST00000612828 CCP110O43303 1012 aa12.59□□□□□ -0.39
CNTNAP3B-211ENST00000612828 ATP2A3Q93084 1043 aa12.59□□□□□ -0.39
CNTNAP3B-211ENST00000612828 DZIP1LQ8IYY4 767 aaKnown RBP12.58□□□□□ -0.39
CNTNAP3B-211ENST00000612828 CWC25Q9NXE8 425 aaPredicted RBP12.58□□□□□ -0.39
CNTNAP3B-211ENST00000612828 IFIT2P09913 472 aaKnown RBP12.58□□□□□ -0.4
CNTNAP3B-211ENST00000612828 BLVRAP53004 296 aa12.58□□□□□ -0.4
CNTNAP3B-211ENST00000612828 PIP4K2BP78356 416 aa12.58□□□□□ -0.4
CNTNAP3B-211ENST00000612828 CEP120Q8N960 986 aa12.58□□□□□ -0.4
CNTNAP3B-211ENST00000612828 MPHOSPH6Q99547 160 aaKnown RBP12.58□□□□□ -0.4
CNTNAP3B-211ENST00000612828 CLEC11AQ9Y240 323 aa12.58□□□□□ -0.4
CNTNAP3B-211ENST00000612828 SUFUQ9UMX1 484 aa12.58□□□□□ -0.4
CNTNAP3B-211ENST00000612828 KMT5BQ4FZB7 885 aa12.58□□□□□ -0.4
CNTNAP3B-211ENST00000612828 KIAA1328Q86T90 577 aa12.58□□□□□ -0.4
CNTNAP3B-211ENST00000612828 ATP6V1DQ9Y5K8 247 aa12.58□□□□□ -0.4
CNTNAP3B-211ENST00000612828 MKRN1Q9UHC7 482 aaKnown RBP12.58□□□□□ -0.4
CNTNAP3B-211ENST00000612828 ANAPC4Q9UJX5 808 aa12.58□□□□□ -0.4
CNTNAP3B-211ENST00000612828 CLNS1AP54105 237 aaKnown RBP12.57□□□□□ -0.4
CNTNAP3B-211ENST00000612828 CCDC73Q6ZRK6 1079 aa12.57□□□□□ -0.4
CNTNAP3B-211ENST00000612828 TERF2IPQ9NYB0 399 aa12.57□□□□□ -0.4
CNTNAP3B-211ENST00000612828 PRXQ9BXM0 1461 aa12.57□□□□□ -0.4
CNTNAP3B-211ENST00000612828 AMOTQ4VCS5 1084 aa12.57□□□□□ -0.4
CNTNAP3B-211ENST00000612828 MINK1Q8N4C8 1332 aaPredicted RBP12.57□□□□□ -0.4
CNTNAP3B-211ENST00000612828 VCXQ9H320 206 aa12.57□□□□□ -0.4
CNTNAP3B-211ENST00000612828 DIAPH1O60610 1272 aaKnown RBP12.57□□□□□ -0.4
CNTNAP3B-211ENST00000612828 PPP2R1AP30153 589 aa12.57□□□□□ -0.4
CNTNAP3B-211ENST00000612828 GABPAQ06546 454 aa12.57□□□□□ -0.4
CNTNAP3B-211ENST00000612828 CRCPO75575 148 aa12.56□□□□□ -0.4
CNTNAP3B-211ENST00000612828 CETN2P41208 172 aa12.56□□□□□ -0.4
CNTNAP3B-211ENST00000612828 SPINK5Q9NQ38 1064 aaPredicted RBP12.56□□□□□ -0.4
CNTNAP3B-211ENST00000612828 HDAC5Q9UQL6 1122 aa12.56□□□□□ -0.4
CNTNAP3B-211ENST00000612828 BRD4O60885 1362 aaPredicted RBP12.56□□□□□ -0.4
CNTNAP3B-211ENST00000612828 DHX8Q14562 1220 aaKnown RBP12.56□□□□□ -0.4
CNTNAP3B-211ENST00000612828 CLSTN2Q9H4D0 955 aa12.56□□□□□ -0.4
CNTNAP3B-211ENST00000612828 RBM10P98175 930 aaKnown RBP12.56□□□□□ -0.4
CNTNAP3B-211ENST00000612828 PSMD6Q15008 389 aa12.56□□□□□ -0.4
CNTNAP3B-211ENST00000612828 TMX1Q9H3N1 280 aa12.56□□□□□ -0.4
CNTNAP3B-211ENST00000612828 WASHC2CQ9Y4E1 1318 aa12.56□□□□□ -0.4
CNTNAP3B-211ENST00000612828 CTR9Q6PD62 1173 aa12.56□□□□□ -0.4
CNTNAP3B-211ENST00000612828 LUC7LQ9NQ29 371 aaKnown RBP12.56□□□□□ -0.4
CNTNAP3B-211ENST00000612828 STK24Q9Y6E0 443 aa12.56□□□□□ -0.4
CNTNAP3B-211ENST00000612828 SARNPP82979 210 aaKnown RBP12.55□□□□□ -0.4
CNTNAP3B-211ENST00000612828 C20orf194Q5TEA3 1177 aa12.55□□□□□ -0.4
CNTNAP3B-211ENST00000612828 CCDC170Q8IYT3 715 aa12.55□□□□□ -0.4
CNTNAP3B-211ENST00000612828 TMCO5AQ8N6Q1 288 aa12.55□□□□□ -0.4
CNTNAP3B-211ENST00000612828 C22orf23Q9BZE7 217 aa12.55□□□□□ -0.4
CNTNAP3B-211ENST00000612828 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.55□□□□□ -0.4
CNTNAP3B-211ENST00000612828 ZBTB12Q9Y330 459 aaPredicted RBP12.55□□□□□ -0.4
CNTNAP3B-211ENST00000612828 V9GYY5 206 aaPredicted RBP12.55□□□□□ -0.4
CNTNAP3B-211ENST00000612828 NAA16Q6N069 864 aaPredicted RBP12.55□□□□□ -0.4
CNTNAP3B-211ENST00000612828 NAT10Q9H0A0 1025 aaKnown RBP12.55□□□□□ -0.4
CNTNAP3B-211ENST00000612828 ANLNQ9NQW6 1124 aa12.55□□□□□ -0.4
CNTNAP3B-211ENST00000612828 DYNC1I1O14576 645 aa12.55□□□□□ -0.4
CNTNAP3B-211ENST00000612828 FOXD4Q12950 439 aaPredicted RBP12.55□□□□□ -0.4
CNTNAP3B-211ENST00000612828 WDR66Q8TBY9 1149 aa12.55□□□□□ -0.4
CNTNAP3B-211ENST00000612828 GGNBP2Q9H3C7 697 aa12.55□□□□□ -0.4
CNTNAP3B-211ENST00000612828 MMRN2Q9H8L6 949 aa12.55□□□□□ -0.4
CNTNAP3B-211ENST00000612828 SPECC1L-ADORA2AF8WAN1 911 aa12.55□□□□□ -0.4
CNTNAP3B-211ENST00000612828 SERPINC1P01008 464 aa12.55□□□□□ -0.4
CNTNAP3B-211ENST00000612828 SETDB1Q15047 1291 aa12.54□□□□□ -0.4
CNTNAP3B-211ENST00000612828 TMEM132EQ6IEE7 984 aa12.54□□□□□ -0.4
CNTNAP3B-211ENST00000612828 ALS2CR12Q96Q35 445 aa12.54□□□□□ -0.4
CNTNAP3B-211ENST00000612828 WWC3Q9ULE0 1092 aa12.54□□□□□ -0.4
CNTNAP3B-211ENST00000612828 ANKRD50Q9ULJ7 1429 aa12.54□□□□□ -0.4
CNTNAP3B-211ENST00000612828 SLC3A2P08195 630 aaKnown RBP12.54□□□□□ -0.4
CNTNAP3B-211ENST00000612828 RIPK4P57078 832 aa12.54□□□□□ -0.4
CNTNAP3B-211ENST00000612828 TCP11L2Q8N4U5 519 aa12.54□□□□□ -0.4
CNTNAP3B-211ENST00000612828 CASKIN1Q8WXD9 1431 aa12.54□□□□□ -0.4
CNTNAP3B-211ENST00000612828 CDR2Q01850 454 aa12.54□□□□□ -0.4
CNTNAP3B-211ENST00000612828 SPTY2D1Q68D10 685 aaPredicted RBP12.54□□□□□ -0.4
CNTNAP3B-211ENST00000612828 MPNDQ8N594 471 aa12.54□□□□□ -0.4
CNTNAP3B-211ENST00000612828 ATP6V1E2Q96A05 226 aa12.54□□□□□ -0.4
CNTNAP3B-211ENST00000612828 ZC4H2Q9NQZ6 224 aa12.54□□□□□ -0.4
CNTNAP3B-211ENST00000612828 PDZRN3Q9UPQ7 1066 aa12.54□□□□□ -0.4
CNTNAP3B-211ENST00000612828 GMNNO75496 209 aa12.54□□□□□ -0.4
CNTNAP3B-211ENST00000612828 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.54□□□□□ -0.4
CNTNAP3B-211ENST00000612828 ZBTB24O43167 697 aaPredicted RBP12.53□□□□□ -0.4
CNTNAP3B-211ENST00000612828 FBF1Q8TES7 1133 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms