RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 BABAM1Q9NWV8 329 aa20.83■□□□□ 0.93
CLTCL1-207ENST00000611723 KDM6AO15550 1401 aaPredicted RBP20.82■□□□□ 0.92
CLTCL1-207ENST00000611723 ERVV-2B6SEH9 535 aa20.82■□□□□ 0.92
CLTCL1-207ENST00000611723 GNAI1P63096 354 aa20.82■□□□□ 0.92
CLTCL1-207ENST00000611723 TAF7Q15545 349 aaPredicted RBP20.82■□□□□ 0.92
CLTCL1-207ENST00000611723 MARCH10Q8NA82 808 aaPredicted RBP20.82■□□□□ 0.92
CLTCL1-207ENST00000611723 LRRC37A3O60309 1634 aa20.82■□□□□ 0.92
CLTCL1-207ENST00000611723 CHL1O00533 1208 aa20.81■□□□□ 0.92
CLTCL1-207ENST00000611723 MYH16Q9H6N6 1097 aa20.81■□□□□ 0.92
CLTCL1-207ENST00000611723 TNS1Q9HBL0 1735 aaKnown RBP20.81■□□□□ 0.92
CLTCL1-207ENST00000611723 DUSP27Q5VZP5 1158 aa20.8■□□□□ 0.92
CLTCL1-207ENST00000611723 SCN11AQ9UI33 1791 aa20.8■□□□□ 0.92
CLTCL1-207ENST00000611723 TEFQ10587 303 aa20.79■□□□□ 0.92
CLTCL1-207ENST00000611723 SLC52A2Q9HAB3 445 aa20.78■□□□□ 0.92
CLTCL1-207ENST00000611723 EZH2Q15910 746 aaKnown RBP20.77■□□□□ 0.92
CLTCL1-207ENST00000611723 VIRMAQ69YN4 1812 aaKnown RBP20.76■□□□□ 0.91
CLTCL1-207ENST00000611723 MRC1P22897 1456 aa20.76■□□□□ 0.91
CLTCL1-207ENST00000611723 BCL9O00512 1426 aa20.76■□□□□ 0.91
CLTCL1-207ENST00000611723 CENPBP07199 599 aaPredicted RBP20.75■□□□□ 0.91
CLTCL1-207ENST00000611723 CABP4P57796 275 aa20.75■□□□□ 0.91
CLTCL1-207ENST00000611723 NFATC2IPQ8NCF5 419 aa20.75■□□□□ 0.91
CLTCL1-207ENST00000611723 MBIPQ9NS73 344 aa20.75■□□□□ 0.91
CLTCL1-207ENST00000611723 LAS1LQ9Y4W2 734 aaKnown RBP20.75■□□□□ 0.91
CLTCL1-207ENST00000611723 FANCIQ9NVI1 1328 aa20.75■□□□□ 0.91
CLTCL1-207ENST00000611723 TSR2Q969E8 191 aaKnown RBP20.73■□□□□ 0.91
CLTCL1-207ENST00000611723 TSPYL4Q9UJ04 414 aa20.73■□□□□ 0.91
CLTCL1-207ENST00000611723 SIPA1L3O60292 1781 aaPredicted RBP20.72■□□□□ 0.91
CLTCL1-207ENST00000611723 BTBD11A6QL63 1104 aa20.72■□□□□ 0.91
CLTCL1-207ENST00000611723 MIS18AQ9NYP9 233 aa20.72■□□□□ 0.91
CLTCL1-207ENST00000611723 TRIM37O94972 964 aa20.71■□□□□ 0.91
CLTCL1-207ENST00000611723 CAMKK2Q96RR4 588 aa20.7■□□□□ 0.9
CLTCL1-207ENST00000611723 TOGARAM1Q9Y4F4 1720 aa20.7■□□□□ 0.9
CLTCL1-207ENST00000611723 CT47B1P0C2W7 299 aaPredicted RBP20.69■□□□□ 0.9
CLTCL1-207ENST00000611723 PRIM1P49642 420 aaKnown RBP20.69■□□□□ 0.9
CLTCL1-207ENST00000611723 PIGBQ92521 554 aa20.69■□□□□ 0.9
CLTCL1-207ENST00000611723 TMOD3Q9NYL9 352 aa20.69■□□□□ 0.9
CLTCL1-207ENST00000611723 EXOSC9Q06265 439 aaKnown RBP20.68■□□□□ 0.9
CLTCL1-207ENST00000611723 ZNF790Q6PG37 636 aa20.68■□□□□ 0.9
CLTCL1-207ENST00000611723 KAT6BQ8WYB5 2073 aa20.68■□□□□ 0.9
CLTCL1-207ENST00000611723 KCNQ3O43525 872 aa20.67■□□□□ 0.9
CLTCL1-207ENST00000611723 EIF4A1P60842 406 aaKnown RBP20.67■□□□□ 0.9
CLTCL1-207ENST00000611723 FAM196AQ6ZSG2 479 aa20.67■□□□□ 0.9
CLTCL1-207ENST00000611723 ITGB4P16144 1822 aa20.67■□□□□ 0.9
CLTCL1-207ENST00000611723 KDM3BQ7LBC6 1761 aa20.66■□□□□ 0.9
CLTCL1-207ENST00000611723 HEG1Q9ULI3 1381 aa20.65■□□□□ 0.9
CLTCL1-207ENST00000611723 SOS1Q07889 1333 aaPredicted RBP20.65■□□□□ 0.9
CLTCL1-207ENST00000611723 C8orf58Q8NAV2 365 aa20.65■□□□□ 0.9
CLTCL1-207ENST00000611723 ACSBG1Q96GR2 724 aa20.65■□□□□ 0.9
CLTCL1-207ENST00000611723 VAMP4O75379 141 aa20.64■□□□□ 0.89
CLTCL1-207ENST00000611723 APBA3O96018 575 aa20.64■□□□□ 0.89
CLTCL1-207ENST00000611723 SLC39A6Q13433 755 aa20.64■□□□□ 0.89
CLTCL1-207ENST00000611723 NUP188Q5SRE5 1749 aa20.64■□□□□ 0.89
CLTCL1-207ENST00000611723 ZNF428Q96B54 188 aa20.63■□□□□ 0.89
CLTCL1-207ENST00000611723 ATG3Q9NT62 314 aa20.63■□□□□ 0.89
CLTCL1-207ENST00000611723 DOT1LQ8TEK3 1739 aa20.63■□□□□ 0.89
CLTCL1-207ENST00000611723 RREB1Q92766 1687 aa20.63■□□□□ 0.89
CLTCL1-207ENST00000611723 KCNQ2O43526 872 aa20.62■□□□□ 0.89
CLTCL1-207ENST00000611723 TTC5Q8N0Z6 440 aa20.62■□□□□ 0.89
CLTCL1-207ENST00000611723 TSPYL6Q8N831 410 aa20.62■□□□□ 0.89
CLTCL1-207ENST00000611723 SYTL4Q96C24 671 aaPredicted RBP20.62■□□□□ 0.89
CLTCL1-207ENST00000611723 HOXB7P09629 217 aa20.61■□□□□ 0.89
CLTCL1-207ENST00000611723 TWISTNBQ3B726 338 aaPredicted RBP20.61■□□□□ 0.89
CLTCL1-207ENST00000611723 ASAP1Q9ULH1 1129 aa20.61■□□□□ 0.89
CLTCL1-207ENST00000611723 YY1P25490 414 aa20.6■□□□□ 0.89
CLTCL1-207ENST00000611723 KRT24Q2M2I5 525 aa20.6■□□□□ 0.89
CLTCL1-207ENST00000611723 ZNF496Q96IT1 587 aaPredicted RBP20.6■□□□□ 0.89
CLTCL1-207ENST00000611723 FMNL2Q96PY5 1086 aa20.6■□□□□ 0.89
CLTCL1-207ENST00000611723 BCL11BQ9C0K0 894 aaPredicted RBP20.6■□□□□ 0.89
CLTCL1-207ENST00000611723 RCAN3Q9UKA8 241 aa20.6■□□□□ 0.89
CLTCL1-207ENST00000611723 PAPPAQ13219 1627 aa20.6■□□□□ 0.89
CLTCL1-207ENST00000611723 GIGYF1O75420 1035 aaPredicted RBP20.59■□□□□ 0.89
CLTCL1-207ENST00000611723 SMARCC1Q92922 1105 aaPredicted RBP20.59■□□□□ 0.89
CLTCL1-207ENST00000611723 SBF2Q86WG5 1849 aa20.59■□□□□ 0.89
CLTCL1-207ENST00000611723 ELL2O00472 640 aaPredicted RBP20.58■□□□□ 0.89
CLTCL1-207ENST00000611723 CHMP4AQ9BY43 222 aa20.58■□□□□ 0.89
CLTCL1-207ENST00000611723 NHSQ6T4R5 1651 aa20.58■□□□□ 0.88
CLTCL1-207ENST00000611723 SNRPA1P09661 255 aaKnown RBP20.57■□□□□ 0.88
CLTCL1-207ENST00000611723 RARSP54136 660 aaKnown RBP20.57■□□□□ 0.88
CLTCL1-207ENST00000611723 VSIG10Q8N0Z9 540 aa20.57■□□□□ 0.88
CLTCL1-207ENST00000611723 KCPQ6ZWJ8 1503 aa20.57■□□□□ 0.88
CLTCL1-207ENST00000611723 UBR2Q8IWV8 1755 aa20.57■□□□□ 0.88
CLTCL1-207ENST00000611723 ALDH1L2Q3SY69 923 aa20.56■□□□□ 0.88
CLTCL1-207ENST00000611723 PTF1AQ7RTS3 328 aa20.56■□□□□ 0.88
CLTCL1-207ENST00000611723 BRPF1P55201 1214 aaPredicted RBP20.54■□□□□ 0.88
CLTCL1-207ENST00000611723 PTCD1O75127 700 aaKnown RBP20.53■□□□□ 0.88
CLTCL1-207ENST00000611723 TEX13AQ9BXU3 409 aaPredicted RBP20.53■□□□□ 0.88
CLTCL1-207ENST00000611723 CCDC30Q5VVM6 783 aa20.52■□□□□ 0.88
CLTCL1-207ENST00000611723 SSH1Q8WYL5 1049 aa20.52■□□□□ 0.88
CLTCL1-207ENST00000611723 PALLDQ8WX93 1383 aa20.51■□□□□ 0.87
CLTCL1-207ENST00000611723 PRAMEF22A3QJZ6 481 aa20.51■□□□□ 0.87
CLTCL1-207ENST00000611723 SLC4A9Q96Q91 983 aa20.51■□□□□ 0.87
CLTCL1-207ENST00000611723 RBM42Q9BTD8 480 aaKnown RBP20.51■□□□□ 0.87
CLTCL1-207ENST00000611723 USP16Q9Y5T5 823 aa20.51■□□□□ 0.87
CLTCL1-207ENST00000611723 RNF123Q5XPI4 1314 aa20.51■□□□□ 0.87
CLTCL1-207ENST00000611723 BTAF1O14981 1849 aa20.5■□□□□ 0.87
CLTCL1-207ENST00000611723 LOC102724428A0A0B4J2F2 783 aa20.5■□□□□ 0.87
CLTCL1-207ENST00000611723 SIK1P57059 783 aa20.5■□□□□ 0.87
CLTCL1-207ENST00000611723 HDGFL1Q5TGJ6 251 aa20.5■□□□□ 0.87
CLTCL1-207ENST00000611723 NBPF14Q5TI25 921 aa20.5■□□□□ 0.87
CLTCL1-207ENST00000611723 MRPL50Q8N5N7 158 aaKnown RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms