RNA–Protein interactions for RNA: ENST00000609107.1

LINC02538-201, Transcript of long intergenic non-protein coding RNA 2538, humanhuman

TSL 2 BASIC

Gene LINC02538, Length 4,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02538-201ENST00000609107 XPCQ01831 940 aaPredicted RBP17.04■□□□□ 0.32
LINC02538-201ENST00000609107 LRRIQ1Q96JM4 1722 aa17.04■□□□□ 0.32
LINC02538-201ENST00000609107 FLT4P35916 1363 aa17.04■□□□□ 0.32
LINC02538-201ENST00000609107 IL13P35225 146 aa17.04■□□□□ 0.32
LINC02538-201ENST00000609107 HOOK1Q9UJC3 728 aaKnown RBP17.04■□□□□ 0.32
LINC02538-201ENST00000609107 R3HCC1Q9Y3T6 440 aaKnown RBP17.04■□□□□ 0.32
LINC02538-201ENST00000609107 TRPM1Q7Z4N2 1603 aa17.03■□□□□ 0.32
LINC02538-201ENST00000609107 CCDC158Q5M9N0 1113 aa17.03■□□□□ 0.32
LINC02538-201ENST00000609107 KIF6Q6ZMV9 814 aa17.03■□□□□ 0.32
LINC02538-201ENST00000609107 HYPKQ9NX55 129 aa17.03■□□□□ 0.32
LINC02538-201ENST00000609107 UNC13BO14795 1591 aa17.03■□□□□ 0.32
LINC02538-201ENST00000609107 CFAP74Q9C0B2 1584 aa17.03■□□□□ 0.32
LINC02538-201ENST00000609107 CASTP20810 708 aaKnown RBP17.03■□□□□ 0.32
LINC02538-201ENST00000609107 DHX16O60231 1041 aaKnown RBP17.03■□□□□ 0.32
LINC02538-201ENST00000609107 ZC3H6P61129 1189 aaKnown RBP17.03■□□□□ 0.32
LINC02538-201ENST00000609107 SHROOM2Q13796 1616 aa17.03■□□□□ 0.32
LINC02538-201ENST00000609107 ZCCHC11Q5TAX3 1644 aaKnown RBP17.03■□□□□ 0.32
LINC02538-201ENST00000609107 CCDC192P0DO97 292 aa17.03■□□□□ 0.32
LINC02538-201ENST00000609107 ZNF396Q96N95 335 aaPredicted RBP17.03■□□□□ 0.32
LINC02538-201ENST00000609107 NAT10Q9H0A0 1025 aaKnown RBP17.03■□□□□ 0.32
LINC02538-201ENST00000609107 ERICH2A1L162 156 aa17.02■□□□□ 0.32
LINC02538-201ENST00000609107 BAG4O95429 457 aaKnown RBP17.02■□□□□ 0.32
LINC02538-201ENST00000609107 SAFBQ15424 915 aaKnown RBP eCLIP17.02■□□□□ 0.32
LINC02538-201ENST00000609107 MPRIPQ6WCQ1 1025 aa17.02■□□□□ 0.32
LINC02538-201ENST00000609107 PDE1AP54750 535 aa17.02■□□□□ 0.31
LINC02538-201ENST00000609107 FAM13BQ9NYF5 915 aa17.02■□□□□ 0.31
LINC02538-201ENST00000609107 TBC1D2BQ9UPU7 963 aa17.02■□□□□ 0.31
LINC02538-201ENST00000609107 SDF4Q9BRK5 362 aa17.01■□□□□ 0.31
LINC02538-201ENST00000609107 ZMYM3Q14202 1370 aa17.01■□□□□ 0.31
LINC02538-201ENST00000609107 KINO60870 393 aaKnown RBP17.01■□□□□ 0.31
LINC02538-201ENST00000609107 PPP1R42Q7Z4L9 355 aa17.01■□□□□ 0.31
LINC02538-201ENST00000609107 CEP85Q6P2H3 762 aa17.01■□□□□ 0.31
LINC02538-201ENST00000609107 SH2B1Q9NRF2 756 aaPredicted RBP17.01■□□□□ 0.31
LINC02538-201ENST00000609107 MTHFSDQ2M296 383 aaKnown RBP17.01■□□□□ 0.31
LINC02538-201ENST00000609107 TOM1L2Q6ZVM7 507 aa17.01■□□□□ 0.31
LINC02538-201ENST00000609107 CHD1O14646 1710 aa17■□□□□ 0.31
LINC02538-201ENST00000609107 KLHL40Q2TBA0 621 aa17■□□□□ 0.31
LINC02538-201ENST00000609107 ZFYVE16Q7Z3T8 1539 aa17■□□□□ 0.31
LINC02538-201ENST00000609107 ATP8B2P98198 1209 aa17■□□□□ 0.31
LINC02538-201ENST00000609107 TTC39AQ5SRH9 613 aa17■□□□□ 0.31
LINC02538-201ENST00000609107 PRPF40BQ6NWY9 871 aaKnown RBP16.99■□□□□ 0.31
LINC02538-201ENST00000609107 ECHDC1Q9NTX5 307 aa16.99■□□□□ 0.31
LINC02538-201ENST00000609107 TET3O43151 1660 aa16.99■□□□□ 0.31
LINC02538-201ENST00000609107 SYCE3A1L190 88 aa16.99■□□□□ 0.31
LINC02538-201ENST00000609107 STK3Q13188 491 aa16.99■□□□□ 0.31
LINC02538-201ENST00000609107 ZSCAN30Q86W11 494 aa16.99■□□□□ 0.31
LINC02538-201ENST00000609107 TRIM5Q9C035 493 aa16.99■□□□□ 0.31
LINC02538-201ENST00000609107 LIMCH1Q9UPQ0 1083 aa16.99■□□□□ 0.31
LINC02538-201ENST00000609107 FOXO3O43524 673 aa16.99■□□□□ 0.31
LINC02538-201ENST00000609107 MLH3Q9UHC1 1453 aa16.99■□□□□ 0.31
LINC02538-201ENST00000609107 UGGT1Q9NYU2 1555 aa16.99■□□□□ 0.31
LINC02538-201ENST00000609107 PI4KAP2A4QPH2 592 aa16.99■□□□□ 0.31
LINC02538-201ENST00000609107 TPD52L1Q16890 204 aaPredicted RBP16.99■□□□□ 0.31
LINC02538-201ENST00000609107 PI4KAP1Q8N8J0 262 aa16.99■□□□□ 0.31
LINC02538-201ENST00000609107 PLEKHM2Q8IWE5 1019 aa16.98■□□□□ 0.31
LINC02538-201ENST00000609107 ARAP3Q8WWN8 1544 aa16.98■□□□□ 0.31
LINC02538-201ENST00000609107 RBM25P49756 843 aaKnown RBP16.98■□□□□ 0.31
LINC02538-201ENST00000609107 VPS37DQ86XT2 251 aa16.98■□□□□ 0.31
LINC02538-201ENST00000609107 SOS1Q07889 1333 aaPredicted RBP16.98■□□□□ 0.31
LINC02538-201ENST00000609107 ANAPC15P60006 121 aa16.98■□□□□ 0.31
LINC02538-201ENST00000609107 MAP7D2Q96T17 732 aa16.98■□□□□ 0.31
LINC02538-201ENST00000609107 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.98■□□□□ 0.31
LINC02538-201ENST00000609107 PRDM11Q9NQV5 511 aa16.98■□□□□ 0.31
LINC02538-201ENST00000609107 ZNF592Q92610 1267 aa16.97■□□□□ 0.31
LINC02538-201ENST00000609107 CEP126Q9P2H0 1117 aa16.97■□□□□ 0.31
LINC02538-201ENST00000609107 CCDC57Q2TAC2 916 aa16.97■□□□□ 0.31
LINC02538-201ENST00000609107 RHPN1Q8TCX5 695 aa16.97■□□□□ 0.31
LINC02538-201ENST00000609107 TMX4Q9H1E5 349 aaPredicted RBP16.97■□□□□ 0.31
LINC02538-201ENST00000609107 TNMDQ9H2S6 317 aa16.97■□□□□ 0.31
LINC02538-201ENST00000609107 MTERF4Q7Z6M4 381 aaKnown RBP16.97■□□□□ 0.31
LINC02538-201ENST00000609107 C16orf71Q8IYS4 520 aaPredicted RBP16.97■□□□□ 0.31
LINC02538-201ENST00000609107 EVI5LQ96CN4 794 aa16.97■□□□□ 0.31
LINC02538-201ENST00000609107 CCDC83Q8IWF9 413 aa16.97■□□□□ 0.31
LINC02538-201ENST00000609107 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.96■□□□□ 0.31
LINC02538-201ENST00000609107 TPM1P09493 284 aa16.96■□□□□ 0.31
LINC02538-201ENST00000609107 CFAP65Q6ZU64 1925 aaKnown RBP16.96■□□□□ 0.31
LINC02538-201ENST00000609107 NCKAP5LQ9HCH0 1330 aa16.96■□□□□ 0.31
LINC02538-201ENST00000609107 HMGN5P82970 282 aaKnown RBP16.96■□□□□ 0.31
LINC02538-201ENST00000609107 ESYT1Q9BSJ8 1104 aa16.96■□□□□ 0.31
LINC02538-201ENST00000609107 RBM42Q9BTD8 480 aaKnown RBP16.96■□□□□ 0.31
LINC02538-201ENST00000609107 CTNNA3Q9UI47 895 aa16.96■□□□□ 0.31
LINC02538-201ENST00000609107 KIF1BO60333 1816 aa16.96■□□□□ 0.31
LINC02538-201ENST00000609107 KRT24Q2M2I5 525 aa16.96■□□□□ 0.31
LINC02538-201ENST00000609107 SPATA32Q96LK8 384 aa16.96■□□□□ 0.31
LINC02538-201ENST00000609107 BOLA2Q9H3K6 86 aa16.96■□□□□ 0.31
LINC02538-201ENST00000609107 STRN4Q9NRL3 753 aa16.96■□□□□ 0.31
LINC02538-201ENST00000609107 CFAP45Q9UL16 551 aa16.96■□□□□ 0.31
LINC02538-201ENST00000609107 MAP3K2Q9Y2U5 619 aa16.96■□□□□ 0.31
LINC02538-201ENST00000609107 MYD88Q99836 296 aa16.96■□□□□ 0.3
LINC02538-201ENST00000609107 TSHZ3Q63HK5 1081 aa16.95■□□□□ 0.3
LINC02538-201ENST00000609107 CREBRFQ8IUR6 639 aa16.95■□□□□ 0.3
LINC02538-201ENST00000609107 AMOTL1Q8IY63 956 aa16.95■□□□□ 0.3
LINC02538-201ENST00000609107 MAP3K19Q56UN5 1328 aa16.95■□□□□ 0.3
LINC02538-201ENST00000609107 DDX54Q8TDD1 881 aaKnown RBP16.95■□□□□ 0.3
LINC02538-201ENST00000609107 CNNM1Q9NRU3 951 aa16.95■□□□□ 0.3
LINC02538-201ENST00000609107 SART3Q15020 963 aaKnown RBP16.95■□□□□ 0.3
LINC02538-201ENST00000609107 STK38Q15208 465 aa16.95■□□□□ 0.3
LINC02538-201ENST00000609107 EYA1Q99502 592 aa16.95■□□□□ 0.3
LINC02538-201ENST00000609107 CHL1O00533 1208 aa16.94■□□□□ 0.3
LINC02538-201ENST00000609107 RAB3GAP1Q15042 981 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms