RNA–Protein interactions for RNA: ENST00000608917.1

PACERR-201, PTGS2 antisense NFKB1 complex-mediated expression regulator RNA, humanhuman

BASIC

Gene PACERR, Length 825 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACERR-201ENST00000608917 PKD1L3Q7Z443 1732 aa12.23□□□□□ -0.45
PACERR-201ENST00000608917 SALL2Q9Y467 1007 aaPredicted RBP12.23□□□□□ -0.45
PACERR-201ENST00000608917 KDM6AO15550 1401 aaPredicted RBP12.22□□□□□ -0.45
PACERR-201ENST00000608917 KCNQ2O43526 872 aa12.22□□□□□ -0.45
PACERR-201ENST00000608917 TRIM37O94972 964 aa12.22□□□□□ -0.45
PACERR-201ENST00000608917 HNRNPUQ00839 825 aaKnown RBP eCLIP12.22□□□□□ -0.45
PACERR-201ENST00000608917 TAF7Q15545 349 aaPredicted RBP12.22□□□□□ -0.45
PACERR-201ENST00000608917 CCDC125Q86Z20 511 aa12.22□□□□□ -0.45
PACERR-201ENST00000608917 WDR63Q8IWG1 891 aa12.22□□□□□ -0.45
PACERR-201ENST00000608917 PIGBQ92521 554 aa12.22□□□□□ -0.45
PACERR-201ENST00000608917 BABAM1Q9NWV8 329 aa12.22□□□□□ -0.45
PACERR-201ENST00000608917 WNK3Q9BYP7 1800 aa12.21□□□□□ -0.45
PACERR-201ENST00000608917 SENP3-EIF4A1A0A087X0R7 540 aa12.21□□□□□ -0.45
PACERR-201ENST00000608917 BTBD11A6QL63 1104 aa12.2□□□□□ -0.46
PACERR-201ENST00000608917 GNAI1P63096 354 aa12.2□□□□□ -0.46
PACERR-201ENST00000608917 THUMPD2Q9BTF0 503 aaKnown RBP12.2□□□□□ -0.46
PACERR-201ENST00000608917 IL16Q14005 1332 aa12.19□□□□□ -0.46
PACERR-201ENST00000608917 CHL1O00533 1208 aa12.19□□□□□ -0.46
PACERR-201ENST00000608917 SF3B2Q13435 895 aaKnown RBP12.19□□□□□ -0.46
PACERR-201ENST00000608917 SMARCC1Q92922 1105 aaPredicted RBP12.19□□□□□ -0.46
PACERR-201ENST00000608917 CFAP44Q96MT7 982 aa12.19□□□□□ -0.46
PACERR-201ENST00000608917 ZNF521Q96K83 1311 aa12.18□□□□□ -0.46
PACERR-201ENST00000608917 APBA3O96018 575 aa12.18□□□□□ -0.46
PACERR-201ENST00000608917 PTF1AQ7RTS3 328 aa12.18□□□□□ -0.46
PACERR-201ENST00000608917 IFT57Q9NWB7 429 aa12.18□□□□□ -0.46
PACERR-201ENST00000608917 PLSCR1O15162 318 aa12.17□□□□□ -0.46
PACERR-201ENST00000608917 ZNF853P0CG23 659 aa12.17□□□□□ -0.46
PACERR-201ENST00000608917 GOLGA2Q08379 1002 aa12.17□□□□□ -0.46
PACERR-201ENST00000608917 ZNF790Q6PG37 636 aa12.17□□□□□ -0.46
PACERR-201ENST00000608917 TTC5Q8N0Z6 440 aa12.17□□□□□ -0.46
PACERR-201ENST00000608917 ATG3Q9NT62 314 aa12.17□□□□□ -0.46
PACERR-201ENST00000608917 ASAP1Q9ULH1 1129 aa12.17□□□□□ -0.46
PACERR-201ENST00000608917 LAS1LQ9Y4W2 734 aaKnown RBP12.17□□□□□ -0.46
PACERR-201ENST00000608917 HMGB2P26583 209 aaKnown RBP12.16□□□□□ -0.46
PACERR-201ENST00000608917 MYH16Q9H6N6 1097 aa12.16□□□□□ -0.46
PACERR-201ENST00000608917 MIS18AQ9NYP9 233 aa12.16□□□□□ -0.46
PACERR-201ENST00000608917 TSPYL4Q9UJ04 414 aa12.16□□□□□ -0.46
PACERR-201ENST00000608917 SHANK3Q9BYB0 1731 aa12.16□□□□□ -0.46
PACERR-201ENST00000608917 BRWD3Q6RI45 1802 aa12.16□□□□□ -0.46
PACERR-201ENST00000608917 ZBED9Q6R2W3 1325 aa12.15□□□□□ -0.46
PACERR-201ENST00000608917 SLC39A6Q13433 755 aa12.15□□□□□ -0.46
PACERR-201ENST00000608917 UPF1Q92900 1129 aaKnown RBP eCLIP12.15□□□□□ -0.46
PACERR-201ENST00000608917 MRC1P22897 1456 aa12.14□□□□□ -0.47
PACERR-201ENST00000608917 E9PSI1 815 aa12.14□□□□□ -0.47
PACERR-201ENST00000608917 BAG6P46379 1132 aa12.14□□□□□ -0.47
PACERR-201ENST00000608917 VSIG10Q8N0Z9 540 aa12.14□□□□□ -0.47
PACERR-201ENST00000608917 FMNL2Q96PY5 1086 aa12.14□□□□□ -0.47
PACERR-201ENST00000608917 MBIPQ9NS73 344 aa12.14□□□□□ -0.47
PACERR-201ENST00000608917 ADAMTS7Q9UKP4 1686 aa12.13□□□□□ -0.47
PACERR-201ENST00000608917 KCNQ3O43525 872 aa12.13□□□□□ -0.47
PACERR-201ENST00000608917 PTCD1O75127 700 aaKnown RBP12.13□□□□□ -0.47
PACERR-201ENST00000608917 EIF4A1P60842 406 aaKnown RBP12.13□□□□□ -0.47
PACERR-201ENST00000608917 RBM42Q9BTD8 480 aaKnown RBP12.13□□□□□ -0.47
PACERR-201ENST00000608917 PALLDQ8WX93 1383 aa12.13□□□□□ -0.47
PACERR-201ENST00000608917 LOC102724428A0A0B4J2F2 783 aa12.12□□□□□ -0.47
PACERR-201ENST00000608917 SIK1P57059 783 aa12.12□□□□□ -0.47
PACERR-201ENST00000608917 SLFN5Q08AF3 891 aa12.12□□□□□ -0.47
PACERR-201ENST00000608917 SLC27A3Q5K4L6 730 aa12.12□□□□□ -0.47
PACERR-201ENST00000608917 ZNF496Q96IT1 587 aaPredicted RBP12.12□□□□□ -0.47
PACERR-201ENST00000608917 YTHDC1Q96MU7 727 aaKnown RBP12.12□□□□□ -0.47
PACERR-201ENST00000608917 CAMKK2Q96RR4 588 aa12.12□□□□□ -0.47
PACERR-201ENST00000608917 TEX13AQ9BXU3 409 aaPredicted RBP12.12□□□□□ -0.47
PACERR-201ENST00000608917 SNRPA1P09661 255 aaKnown RBP12.11□□□□□ -0.47
PACERR-201ENST00000608917 ATP6V1AP38606 617 aa12.11□□□□□ -0.47
PACERR-201ENST00000608917 EN1Q05925 392 aaPredicted RBP12.11□□□□□ -0.47
PACERR-201ENST00000608917 TXNRD1Q16881 649 aa12.11□□□□□ -0.47
PACERR-201ENST00000608917 TRMT2AQ8IZ69 625 aaKnown RBP12.11□□□□□ -0.47
PACERR-201ENST00000608917 TSR2Q969E8 191 aaKnown RBP12.11□□□□□ -0.47
PACERR-201ENST00000608917 CDCA7LQ96GN5 454 aa12.11□□□□□ -0.47
PACERR-201ENST00000608917 CHMP4AQ9BY43 222 aa12.11□□□□□ -0.47
PACERR-201ENST00000608917 ZNF219Q9P2Y4 722 aaPredicted RBP12.11□□□□□ -0.47
PACERR-201ENST00000608917 GIGYF1O75420 1035 aaPredicted RBP12.1□□□□□ -0.47
PACERR-201ENST00000608917 PROM2Q8N271 834 aa12.1□□□□□ -0.47
PACERR-201ENST00000608917 CCNL1Q9UK58 526 aaPredicted RBP12.1□□□□□ -0.47
PACERR-201ENST00000608917 SCN11AQ9UI33 1791 aa12.1□□□□□ -0.47
PACERR-201ENST00000608917 FANCIQ9NVI1 1328 aa12.1□□□□□ -0.47
PACERR-201ENST00000608917 NHSQ6T4R5 1651 aa12.1□□□□□ -0.47
PACERR-201ENST00000608917 TOGARAM1Q9Y4F4 1720 aa12.09□□□□□ -0.47
PACERR-201ENST00000608917 HEG1Q9ULI3 1381 aa12.09□□□□□ -0.47
PACERR-201ENST00000608917 HOXB7P09629 217 aa12.09□□□□□ -0.47
PACERR-201ENST00000608917 DEFB132Q7Z7B7 95 aa12.09□□□□□ -0.47
PACERR-201ENST00000608917 SLC4A9Q96Q91 983 aa12.09□□□□□ -0.47
PACERR-201ENST00000608917 SOS1Q07889 1333 aaPredicted RBP12.09□□□□□ -0.47
PACERR-201ENST00000608917 DOT1LQ8TEK3 1739 aa12.08□□□□□ -0.47
PACERR-201ENST00000608917 STARD3NLO95772 234 aa12.08□□□□□ -0.48
PACERR-201ENST00000608917 EZH2Q15910 746 aaKnown RBP12.08□□□□□ -0.48
PACERR-201ENST00000608917 DUSP27Q5VZP5 1158 aa12.08□□□□□ -0.48
PACERR-201ENST00000608917 SAMD1Q6SPF0 538 aaPredicted RBP12.08□□□□□ -0.48
PACERR-201ENST00000608917 C8orf58Q8NAV2 365 aa12.08□□□□□ -0.48
PACERR-201ENST00000608917 DLG5Q8TDM6 1919 aa12.07□□□□□ -0.48
PACERR-201ENST00000608917 EXOSC9Q06265 439 aaKnown RBP12.07□□□□□ -0.48
PACERR-201ENST00000608917 DNAJC10Q8IXB1 793 aa12.07□□□□□ -0.48
PACERR-201ENST00000608917 LRRC4BQ9NT99 713 aa12.07□□□□□ -0.48
PACERR-201ENST00000608917 KAT6BQ8WYB5 2073 aa12.06□□□□□ -0.48
PACERR-201ENST00000608917 ELL2O00472 640 aaPredicted RBP12.06□□□□□ -0.48
PACERR-201ENST00000608917 CT47B1P0C2W7 299 aaPredicted RBP12.06□□□□□ -0.48
PACERR-201ENST00000608917 ITPK1Q13572 414 aa12.06□□□□□ -0.48
PACERR-201ENST00000608917 TWISTNBQ3B726 338 aaPredicted RBP12.06□□□□□ -0.48
PACERR-201ENST00000608917 RC3H1Q5TC82 1133 aaKnown RBP12.06□□□□□ -0.48
PACERR-201ENST00000608917 USP16Q9Y5T5 823 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms