RNA–Protein interactions for RNA: ENST00000608107.1

ITGB5-211, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 548 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-211ENST00000608107 BCL9O00512 1426 aa13.43□□□□□ -0.26
ITGB5-211ENST00000608107 TEFQ10587 303 aa13.43□□□□□ -0.26
ITGB5-211ENST00000608107 NGEFQ8N5V2 710 aa13.43□□□□□ -0.26
ITGB5-211ENST00000608107 PIGBQ92521 554 aa13.43□□□□□ -0.26
ITGB5-211ENST00000608107 KCNQ3O43525 872 aa13.42□□□□□ -0.26
ITGB5-211ENST00000608107 SLC39A6Q13433 755 aa13.42□□□□□ -0.26
ITGB5-211ENST00000608107 FAM196AQ6ZSG2 479 aa13.42□□□□□ -0.26
ITGB5-211ENST00000608107 WDR63Q8IWG1 891 aa13.42□□□□□ -0.26
ITGB5-211ENST00000608107 KDM3BQ7LBC6 1761 aa13.42□□□□□ -0.26
ITGB5-211ENST00000608107 ZBED9Q6R2W3 1325 aa13.41□□□□□ -0.26
ITGB5-211ENST00000608107 EP400Q96L91 3159 aa13.41□□□□□ -0.26
ITGB5-211ENST00000608107 TRIM37O94972 964 aa13.41□□□□□ -0.26
ITGB5-211ENST00000608107 ZNF853P0CG23 659 aa13.41□□□□□ -0.26
ITGB5-211ENST00000608107 TAF7Q15545 349 aaPredicted RBP13.41□□□□□ -0.26
ITGB5-211ENST00000608107 TMOD3Q9NYL9 352 aa13.41□□□□□ -0.26
ITGB5-211ENST00000608107 ASAP1Q9ULH1 1129 aa13.41□□□□□ -0.26
ITGB5-211ENST00000608107 PAPPAQ13219 1627 aa13.4□□□□□ -0.26
ITGB5-211ENST00000608107 GOLGA2Q08379 1002 aa13.4□□□□□ -0.26
ITGB5-211ENST00000608107 ILDR2Q71H61 639 aa13.4□□□□□ -0.26
ITGB5-211ENST00000608107 TSR2Q969E8 191 aaKnown RBP13.4□□□□□ -0.26
ITGB5-211ENST00000608107 BTBD11A6QL63 1104 aa13.39□□□□□ -0.27
ITGB5-211ENST00000608107 CHL1O00533 1208 aa13.39□□□□□ -0.27
ITGB5-211ENST00000608107 SLFN5Q08AF3 891 aa13.39□□□□□ -0.27
ITGB5-211ENST00000608107 CFAP44Q96MT7 982 aa13.39□□□□□ -0.27
ITGB5-211ENST00000608107 MBIPQ9NS73 344 aa13.39□□□□□ -0.27
ITGB5-211ENST00000608107 ATG3Q9NT62 314 aa13.39□□□□□ -0.27
ITGB5-211ENST00000608107 TNS1Q9HBL0 1735 aaKnown RBP13.39□□□□□ -0.27
ITGB5-211ENST00000608107 IL16Q14005 1332 aa13.39□□□□□ -0.27
ITGB5-211ENST00000608107 KRT24Q2M2I5 525 aa13.38□□□□□ -0.27
ITGB5-211ENST00000608107 IFT57Q9NWB7 429 aa13.38□□□□□ -0.27
ITGB5-211ENST00000608107 TSPYL4Q9UJ04 414 aa13.38□□□□□ -0.27
ITGB5-211ENST00000608107 UBR2Q8IWV8 1755 aa13.37□□□□□ -0.27
ITGB5-211ENST00000608107 GNAI1P63096 354 aa13.37□□□□□ -0.27
ITGB5-211ENST00000608107 CALD1Q05682 793 aaKnown RBP13.37□□□□□ -0.27
ITGB5-211ENST00000608107 BCL11BQ9C0K0 894 aaPredicted RBP13.37□□□□□ -0.27
ITGB5-211ENST00000608107 ZNF790Q6PG37 636 aa13.36□□□□□ -0.27
ITGB5-211ENST00000608107 TRMT2AQ8IZ69 625 aaKnown RBP13.36□□□□□ -0.27
ITGB5-211ENST00000608107 FANCIQ9NVI1 1328 aa13.36□□□□□ -0.27
ITGB5-211ENST00000608107 KCPQ6ZWJ8 1503 aa13.35□□□□□ -0.27
ITGB5-211ENST00000608107 E9PSI1 815 aa13.35□□□□□ -0.27
ITGB5-211ENST00000608107 PTCD1O75127 700 aaKnown RBP13.35□□□□□ -0.27
ITGB5-211ENST00000608107 EIF4A1P60842 406 aaKnown RBP13.35□□□□□ -0.27
ITGB5-211ENST00000608107 DUSP27Q5VZP5 1158 aa13.35□□□□□ -0.27
ITGB5-211ENST00000608107 ZNF496Q96IT1 587 aaPredicted RBP13.35□□□□□ -0.27
ITGB5-211ENST00000608107 C5P01031 1676 aa13.34□□□□□ -0.27
ITGB5-211ENST00000608107 LY75O60449 1722 aa13.34□□□□□ -0.27
ITGB5-211ENST00000608107 PRAMEF22A3QJZ6 481 aa13.34□□□□□ -0.27
ITGB5-211ENST00000608107 KCNQ4P56696 695 aa13.34□□□□□ -0.27
ITGB5-211ENST00000608107 TSPYL6Q8N831 410 aa13.34□□□□□ -0.27
ITGB5-211ENST00000608107 SLC4A9Q96Q91 983 aa13.34□□□□□ -0.27
ITGB5-211ENST00000608107 RBM42Q9BTD8 480 aaKnown RBP13.34□□□□□ -0.27
ITGB5-211ENST00000608107 BABAM1Q9NWV8 329 aa13.34□□□□□ -0.27
ITGB5-211ENST00000608107 PALLDQ8WX93 1383 aa13.33□□□□□ -0.27
ITGB5-211ENST00000608107 ELL2O00472 640 aaPredicted RBP13.33□□□□□ -0.28
ITGB5-211ENST00000608107 APBA3O96018 575 aa13.33□□□□□ -0.28
ITGB5-211ENST00000608107 EXOSC9Q06265 439 aaKnown RBP13.33□□□□□ -0.28
ITGB5-211ENST00000608107 C8orf58Q8NAV2 365 aa13.33□□□□□ -0.28
ITGB5-211ENST00000608107 TTC5Q8N0Z6 440 aa13.32□□□□□ -0.28
ITGB5-211ENST00000608107 MYH16Q9H6N6 1097 aa13.32□□□□□ -0.28
ITGB5-211ENST00000608107 TJP1Q07157 1748 aa13.32□□□□□ -0.28
ITGB5-211ENST00000608107 SMARCC1Q92922 1105 aaPredicted RBP13.31□□□□□ -0.28
ITGB5-211ENST00000608107 FMNL2Q96PY5 1086 aa13.31□□□□□ -0.28
ITGB5-211ENST00000608107 TAF1LQ8IZX4 1826 aa13.31□□□□□ -0.28
ITGB5-211ENST00000608107 HEG1Q9ULI3 1381 aa13.31□□□□□ -0.28
ITGB5-211ENST00000608107 MYH14Q7Z406 1995 aaKnown RBP13.31□□□□□ -0.28
ITGB5-211ENST00000608107 LOC102724428A0A0B4J2F2 783 aa13.3□□□□□ -0.28
ITGB5-211ENST00000608107 GIGYF1O75420 1035 aaPredicted RBP13.3□□□□□ -0.28
ITGB5-211ENST00000608107 SIK1P57059 783 aa13.3□□□□□ -0.28
ITGB5-211ENST00000608107 DEFB132Q7Z7B7 95 aa13.3□□□□□ -0.28
ITGB5-211ENST00000608107 PROM2Q8N271 834 aa13.3□□□□□ -0.28
ITGB5-211ENST00000608107 EN1Q05925 392 aaPredicted RBP13.29□□□□□ -0.28
ITGB5-211ENST00000608107 ITPK1Q13572 414 aa13.29□□□□□ -0.28
ITGB5-211ENST00000608107 DNAJC10Q8IXB1 793 aa13.29□□□□□ -0.28
ITGB5-211ENST00000608107 UPF1Q92900 1129 aaKnown RBP eCLIP13.29□□□□□ -0.28
ITGB5-211ENST00000608107 LRRC4BQ9NT99 713 aa13.29□□□□□ -0.28
ITGB5-211ENST00000608107 USP16Q9Y5T5 823 aa13.29□□□□□ -0.28
ITGB5-211ENST00000608107 COL5A3P25940 1745 aaPredicted RBP13.28□□□□□ -0.28
ITGB5-211ENST00000608107 LAMB4A4D0S4 1761 aa13.28□□□□□ -0.28
ITGB5-211ENST00000608107 PLSCR1O15162 318 aa13.28□□□□□ -0.28
ITGB5-211ENST00000608107 ATP6V1AP38606 617 aa13.28□□□□□ -0.28
ITGB5-211ENST00000608107 TXNRD1Q16881 649 aa13.28□□□□□ -0.28
ITGB5-211ENST00000608107 TWISTNBQ3B726 338 aaPredicted RBP13.28□□□□□ -0.28
ITGB5-211ENST00000608107 NECTIN2Q92692 538 aa13.28□□□□□ -0.28
ITGB5-211ENST00000608107 ZNF831Q5JPB2 1677 aa13.28□□□□□ -0.28
ITGB5-211ENST00000608107 TCERG1O14776 1098 aaKnown RBP13.27□□□□□ -0.29
ITGB5-211ENST00000608107 VAMP4O75379 141 aa13.27□□□□□ -0.29
ITGB5-211ENST00000608107 SNRPA1P09661 255 aaKnown RBP13.27□□□□□ -0.29
ITGB5-211ENST00000608107 EIF2S2P20042 333 aaKnown RBP13.27□□□□□ -0.29
ITGB5-211ENST00000608107 EZH2Q15910 746 aaKnown RBP13.27□□□□□ -0.29
ITGB5-211ENST00000608107 CCNL1Q9UK58 526 aaPredicted RBP13.27□□□□□ -0.29
ITGB5-211ENST00000608107 RGPD3A6NKT7 1758 aaPredicted RBP13.26□□□□□ -0.29
ITGB5-211ENST00000608107 PIP4K2AP48426 406 aaPredicted RBP13.26□□□□□ -0.29
ITGB5-211ENST00000608107 SF3B2Q13435 895 aaKnown RBP13.26□□□□□ -0.29
ITGB5-211ENST00000608107 RGPD4Q7Z3J3 1758 aa13.26□□□□□ -0.29
ITGB5-211ENST00000608107 LINC00116Q8NCU8 138 aa13.26□□□□□ -0.29
ITGB5-211ENST00000608107 CICQ96RK0 1608 aaPredicted RBP13.26□□□□□ -0.29
ITGB5-211ENST00000608107 CAMKK2Q96RR4 588 aa13.26□□□□□ -0.29
ITGB5-211ENST00000608107 A1BGP04217 495 aa13.25□□□□□ -0.29
ITGB5-211ENST00000608107 CYP19A1P11511 503 aaPredicted RBP13.25□□□□□ -0.29
ITGB5-211ENST00000608107 VSIG10Q8N0Z9 540 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms