RNA–Protein interactions for RNA: ENST00000608007.1

C1orf61-226, Transcript of chromosome 1 open reading frame 61, humanhuman

TSL 1 (best)

Gene C1orf61, Length 3,138 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf61-226ENST00000608007 PHF14O94880 888 aa8.47□□□□□ -1.05
C1orf61-226ENST00000608007 SDSP20132 328 aa8.47□□□□□ -1.05
C1orf61-226ENST00000608007 KMT5BQ4FZB7 885 aa8.47□□□□□ -1.05
C1orf61-226ENST00000608007 ZFP91Q96JP5 570 aaPredicted RBP8.47□□□□□ -1.05
C1orf61-226ENST00000608007 PTGS1P23219 599 aa8.47□□□□□ -1.05
C1orf61-226ENST00000608007 SRPK2P78362 688 aaKnown RBP8.47□□□□□ -1.05
C1orf61-226ENST00000608007 CUL4AQ13619 759 aa8.47□□□□□ -1.05
C1orf61-226ENST00000608007 INTS3Q68E01 1043 aaKnown RBP8.47□□□□□ -1.05
C1orf61-226ENST00000608007 C16orf45Q96MC5 204 aaPredicted RBP8.47□□□□□ -1.05
C1orf61-226ENST00000608007 MINK1Q8N4C8 1332 aaPredicted RBP8.46□□□□□ -1.05
C1orf61-226ENST00000608007 PPLO60437 1756 aa8.46□□□□□ -1.05
C1orf61-226ENST00000608007 PIK3R4Q99570 1358 aa8.46□□□□□ -1.05
C1orf61-226ENST00000608007 RBM6P78332 1123 aaKnown RBP8.46□□□□□ -1.05
C1orf61-226ENST00000608007 CCDC183Q5T5S1 534 aa8.46□□□□□ -1.05
C1orf61-226ENST00000608007 EVC2Q86UK5 1308 aa8.46□□□□□ -1.06
C1orf61-226ENST00000608007 A0A1W2PP64 1363 aa8.46□□□□□ -1.06
C1orf61-226ENST00000608007 NEURL4Q96JN8 1562 aa8.46□□□□□ -1.06
C1orf61-226ENST00000608007 YEATS2Q9ULM3 1422 aa8.46□□□□□ -1.06
C1orf61-226ENST00000608007 SMTNL1A8MU46 457 aa8.46□□□□□ -1.06
C1orf61-226ENST00000608007 NEK4P51957 841 aa8.46□□□□□ -1.06
C1orf61-226ENST00000608007 LRMPQ12912 555 aa8.46□□□□□ -1.06
C1orf61-226ENST00000608007 KRT222Q8N1A0 295 aa8.46□□□□□ -1.06
C1orf61-226ENST00000608007 MX1P20591 662 aa8.45□□□□□ -1.06
C1orf61-226ENST00000608007 IRX3P78415 501 aaPredicted RBP8.45□□□□□ -1.06
C1orf61-226ENST00000608007 ALDH1L2Q3SY69 923 aa8.45□□□□□ -1.06
C1orf61-226ENST00000608007 NOL8Q76FK4 1167 aaKnown RBP8.45□□□□□ -1.06
C1orf61-226ENST00000608007 RGS22Q8NE09 1264 aa8.45□□□□□ -1.06
C1orf61-226ENST00000608007 FEZ2Q9UHY8 353 aaPredicted RBP8.45□□□□□ -1.06
C1orf61-226ENST00000608007 SETBP1Q9Y6X0 1596 aa8.45□□□□□ -1.06
C1orf61-226ENST00000608007 RPAP1Q9BWH6 1393 aaPredicted RBP8.45□□□□□ -1.06
C1orf61-226ENST00000608007 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.45□□□□□ -1.06
C1orf61-226ENST00000608007 GIMAP6Q6P9H5 292 aa8.45□□□□□ -1.06
C1orf61-226ENST00000608007 AEBP1Q8IUX7 1158 aa8.45□□□□□ -1.06
C1orf61-226ENST00000608007 CNPY2Q9Y2B0 182 aa8.45□□□□□ -1.06
C1orf61-226ENST00000608007 USP32Q8NFA0 1604 aa8.45□□□□□ -1.06
C1orf61-226ENST00000608007 PTCH1Q13635 1447 aa8.45□□□□□ -1.06
C1orf61-226ENST00000608007 ATXN8OSP0DMR3 200 aa8.45□□□□□ -1.06
C1orf61-226ENST00000608007 NFATC2IPQ8NCF5 419 aa8.45□□□□□ -1.06
C1orf61-226ENST00000608007 THUMPD2Q9BTF0 503 aaKnown RBP8.45□□□□□ -1.06
C1orf61-226ENST00000608007 PALD1Q9ULE6 856 aa8.45□□□□□ -1.06
C1orf61-226ENST00000608007 GLI2P10070 1586 aa8.45□□□□□ -1.06
C1orf61-226ENST00000608007 FRMPD1Q5SYB0 1578 aa8.45□□□□□ -1.06
C1orf61-226ENST00000608007 ERBB3P21860 1342 aa8.44□□□□□ -1.06
C1orf61-226ENST00000608007 CHRM1P11229 460 aaPredicted RBP8.44□□□□□ -1.06
C1orf61-226ENST00000608007 HNRNPH2P55795 449 aaKnown RBP8.44□□□□□ -1.06
C1orf61-226ENST00000608007 TMEM87AQ8NBN3 555 aa8.44□□□□□ -1.06
C1orf61-226ENST00000608007 SRCIN1Q9C0H9 1055 aa8.44□□□□□ -1.06
C1orf61-226ENST00000608007 ZNF446Q9NWS9 450 aa8.44□□□□□ -1.06
C1orf61-226ENST00000608007 CALCOCO1Q9P1Z2 691 aa8.44□□□□□ -1.06
C1orf61-226ENST00000608007 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.44□□□□□ -1.06
C1orf61-226ENST00000608007 V9GYY5 206 aaPredicted RBP8.44□□□□□ -1.06
C1orf61-226ENST00000608007 SIGLEC1Q9BZZ2 1709 aa8.44□□□□□ -1.06
C1orf61-226ENST00000608007 FYB1O15117 783 aa8.44□□□□□ -1.06
C1orf61-226ENST00000608007 IDI1Q13907 227 aa8.44□□□□□ -1.06
C1orf61-226ENST00000608007 FBXO38Q6PIJ6 1188 aa8.44□□□□□ -1.06
C1orf61-226ENST00000608007 MRPL50Q8N5N7 158 aaKnown RBP8.44□□□□□ -1.06
C1orf61-226ENST00000608007 NRBP1Q9UHY1 535 aa8.44□□□□□ -1.06
C1orf61-226ENST00000608007 IL16Q14005 1332 aa8.44□□□□□ -1.06
C1orf61-226ENST00000608007 TNNT1P13805 278 aa8.43□□□□□ -1.06
C1orf61-226ENST00000608007 DCTPP1Q9H773 170 aa8.43□□□□□ -1.06
C1orf61-226ENST00000608007 ABCC4O15439 1325 aa8.43□□□□□ -1.06
C1orf61-226ENST00000608007 CAMSAP1Q5T5Y3 1602 aa8.43□□□□□ -1.06
C1orf61-226ENST00000608007 ELL2O00472 640 aaPredicted RBP8.43□□□□□ -1.06
C1orf61-226ENST00000608007 CYP2C19P33261 490 aa8.43□□□□□ -1.06
C1orf61-226ENST00000608007 TSPYL6Q8N831 410 aa8.43□□□□□ -1.06
C1orf61-226ENST00000608007 CHMP4CQ96CF2 233 aa8.43□□□□□ -1.06
C1orf61-226ENST00000608007 COL3A1P02461 1466 aaPredicted RBP8.43□□□□□ -1.06
C1orf61-226ENST00000608007 LMTK2Q8IWU2 1503 aa8.43□□□□□ -1.06
C1orf61-226ENST00000608007 RAD51AP2Q09MP3 1159 aa8.43□□□□□ -1.06
C1orf61-226ENST00000608007 TEX2Q8IWB9 1127 aa8.43□□□□□ -1.06
C1orf61-226ENST00000608007 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.43□□□□□ -1.06
C1orf61-226ENST00000608007 KIF1BPQ96EK5 621 aa8.43□□□□□ -1.06
C1orf61-226ENST00000608007 PRAM1Q96QH2 718 aa8.43□□□□□ -1.06
C1orf61-226ENST00000608007 ARHGEF28Q8N1W1 1705 aaKnown RBP8.42□□□□□ -1.06
C1orf61-226ENST00000608007 CCDC186Q7Z3E2 898 aa8.42□□□□□ -1.06
C1orf61-226ENST00000608007 ZNF397Q8NF99 534 aaPredicted RBP8.42□□□□□ -1.06
C1orf61-226ENST00000608007 SECISBP2LQ93073 1101 aaKnown RBP8.42□□□□□ -1.06
C1orf61-226ENST00000608007 ZNF215Q9UL58 517 aaPredicted RBP8.42□□□□□ -1.06
C1orf61-226ENST00000608007 RTL1A6NKG5 1358 aa8.42□□□□□ -1.06
C1orf61-226ENST00000608007 ERC2O15083 957 aa8.42□□□□□ -1.06
C1orf61-226ENST00000608007 TPM3P06753 285 aa8.42□□□□□ -1.06
C1orf61-226ENST00000608007 HMOX1P09601 288 aa8.42□□□□□ -1.06
C1orf61-226ENST00000608007 CCDC112Q8NEF3 446 aa8.42□□□□□ -1.06
C1orf61-226ENST00000608007 INTS4Q96HW7 963 aaKnown RBP8.42□□□□□ -1.06
C1orf61-226ENST00000608007 VAMP4O75379 141 aa8.41□□□□□ -1.06
C1orf61-226ENST00000608007 HSP90B1P14625 803 aaKnown RBP8.41□□□□□ -1.06
C1orf61-226ENST00000608007 IFT57Q9NWB7 429 aa8.41□□□□□ -1.06
C1orf61-226ENST00000608007 USP27XA6NNY8 438 aa8.41□□□□□ -1.06
C1orf61-226ENST00000608007 REC8O95072 547 aa8.41□□□□□ -1.06
C1orf61-226ENST00000608007 KCTD17Q8N5Z5 321 aa8.41□□□□□ -1.06
C1orf61-226ENST00000608007 PHACTR3Q96KR7 559 aa8.41□□□□□ -1.06
C1orf61-226ENST00000608007 ABCC3O15438 1527 aa8.41□□□□□ -1.06
C1orf61-226ENST00000608007 ATP10DQ9P241 1426 aa8.41□□□□□ -1.06
C1orf61-226ENST00000608007 APBB1O00213 710 aa8.4□□□□□ -1.06
C1orf61-226ENST00000608007 UBE2HP62256 183 aa8.4□□□□□ -1.06
C1orf61-226ENST00000608007 ELF2Q15723 593 aa8.4□□□□□ -1.06
C1orf61-226ENST00000608007 ZSCAN25Q6NSZ9 544 aa8.4□□□□□ -1.06
C1orf61-226ENST00000608007 RTF1Q92541 710 aaKnown RBP8.4□□□□□ -1.06
C1orf61-226ENST00000608007 CABP1Q9NZU7 370 aa8.4□□□□□ -1.06
C1orf61-226ENST00000608007 PAXBP1Q9Y5B6 917 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms