RNA–Protein interactions for RNA: ENST00000607272.2

MSH6-212, Transcript of mutS homolog 6, humanhuman

TSL 2

Gene MSH6, Length 2,219 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-212ENST00000607272 RRS1Q15050 365 aaKnown RBP15.2■□□□□ 0.02
MSH6-212ENST00000607272 MTERF4Q7Z6M4 381 aaKnown RBP15.2■□□□□ 0.02
MSH6-212ENST00000607272 ANAPC15P60006 121 aa15.19■□□□□ 0.02
MSH6-212ENST00000607272 DYNC1I1O14576 645 aa15.19■□□□□ 0.02
MSH6-212ENST00000607272 ZRANB1Q9UGI0 708 aa15.19■□□□□ 0.02
MSH6-212ENST00000607272 NSFL1CQ9UNZ2 370 aaKnown RBP15.19■□□□□ 0.02
MSH6-212ENST00000607272 UQCRHLA0A096LP55 91 aa15.18■□□□□ 0.02
MSH6-212ENST00000607272 UQCRHP07919 91 aa15.18■□□□□ 0.02
MSH6-212ENST00000607272 RBM10P98175 930 aaKnown RBP15.18■□□□□ 0.02
MSH6-212ENST00000607272 KRT24Q2M2I5 525 aa15.18■□□□□ 0.02
MSH6-212ENST00000607272 FAM13BQ9NYF5 915 aa15.18■□□□□ 0.02
MSH6-212ENST00000607272 PHF14O94880 888 aa15.17■□□□□ 0.02
MSH6-212ENST00000607272 CCT4P50991 539 aaKnown RBP15.17■□□□□ 0.02
MSH6-212ENST00000607272 FBXO31Q5XUX0 539 aaPredicted RBP15.17■□□□□ 0.02
MSH6-212ENST00000607272 ESYT1Q9BSJ8 1104 aa15.17■□□□□ 0.02
MSH6-212ENST00000607272 TSPY26PQ9H489 355 aa15.17■□□□□ 0.02
MSH6-212ENST00000607272 SULT6B1Q6IMI4 303 aa15.16■□□□□ 0.02
MSH6-212ENST00000607272 CCDC61Q9Y6R9 512 aa15.16■□□□□ 0.02
MSH6-212ENST00000607272 FOXD4L5Q5VV16 416 aaPredicted RBP15.16■□□□□ 0.02
MSH6-212ENST00000607272 SASS6Q6UVJ0 657 aa15.16■□□□□ 0.02
MSH6-212ENST00000607272 FOXD4L4Q8WXT5 416 aaPredicted RBP15.16■□□□□ 0.02
MSH6-212ENST00000607272 NUDT16Q96DE0 195 aaKnown RBP15.16■□□□□ 0.02
MSH6-212ENST00000607272 IL17RAQ96F46 866 aa15.16■□□□□ 0.02
MSH6-212ENST00000607272 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.15■□□□□ 0.02
MSH6-212ENST00000607272 CHAMP1Q96JM3 812 aa15.15■□□□□ 0.02
MSH6-212ENST00000607272 SSH2Q76I76 1423 aa15.15■□□□□ 0.02
MSH6-212ENST00000607272 GNAI2P04899 355 aa15.15■□□□□ 0.02
MSH6-212ENST00000607272 EIF4A2Q14240 407 aaKnown RBP15.15■□□□□ 0.02
MSH6-212ENST00000607272 MCM10Q7L590 875 aa15.15■□□□□ 0.02
MSH6-212ENST00000607272 FAM184AQ8NB25 1140 aa15.15■□□□□ 0.02
MSH6-212ENST00000607272 RNF214Q8ND24 703 aa15.15■□□□□ 0.02
MSH6-212ENST00000607272 PTMAP06454 111 aaKnown RBP15.14■□□□□ 0.01
MSH6-212ENST00000607272 AEBP1Q8IUX7 1158 aa15.14■□□□□ 0.01
MSH6-212ENST00000607272 SALL3Q9BXA9 1300 aa15.14■□□□□ 0.01
MSH6-212ENST00000607272 EPB41L2O43491 1005 aaKnown RBP15.13■□□□□ 0.01
MSH6-212ENST00000607272 KIAA2012Q0VF49 1180 aa15.13■□□□□ 0.01
MSH6-212ENST00000607272 LRRCC1Q9C099 1032 aa15.13■□□□□ 0.01
MSH6-212ENST00000607272 CPS1P31327 1500 aa15.13■□□□□ 0.01
MSH6-212ENST00000607272 UVSSAQ2YD98 709 aa15.13■□□□□ 0.01
MSH6-212ENST00000607272 SLC4A10Q6U841 1118 aa15.13■□□□□ 0.01
MSH6-212ENST00000607272 SRCIN1Q9C0H9 1055 aa15.13■□□□□ 0.01
MSH6-212ENST00000607272 MX1P20591 662 aa15.12■□□□□ 0.01
MSH6-212ENST00000607272 CHMLP26374 656 aa15.12■□□□□ 0.01
MSH6-212ENST00000607272 ANO2Q9NQ90 1003 aa15.12■□□□□ 0.01
MSH6-212ENST00000607272 RICTORQ6R327 1708 aa15.12■□□□□ 0.01
MSH6-212ENST00000607272 WDR33Q9C0J8 1336 aaKnown RBP15.12■□□□□ 0.01
MSH6-212ENST00000607272 NRKQ7Z2Y5 1582 aa15.11■□□□□ 0.01
MSH6-212ENST00000607272 STAP2Q9UGK3 403 aa15.11■□□□□ 0.01
MSH6-212ENST00000607272 PALD1Q9ULE6 856 aa15.11■□□□□ 0.01
MSH6-212ENST00000607272 EXOC6BQ9Y2D4 811 aa15.11■□□□□ 0.01
MSH6-212ENST00000607272 CRB1P82279 1406 aa15.11■□□□□ 0.01
MSH6-212ENST00000607272 GNAI3P08754 354 aa15.11■□□□□ 0.01
MSH6-212ENST00000607272 SIRT1Q96EB6 747 aa15.11■□□□□ 0.01
MSH6-212ENST00000607272 A2ML1A8K2U0 1454 aa15.1■□□□□ 0.01
MSH6-212ENST00000607272 RIMBP3CA6NJZ7 1639 aa15.1■□□□□ 0.01
MSH6-212ENST00000607272 RIMBP3BA6NNM3 1639 aa15.1■□□□□ 0.01
MSH6-212ENST00000607272 RIMBP3Q9UFD9 1639 aa15.1■□□□□ 0.01
MSH6-212ENST00000607272 MON2Q7Z3U7 1717 aa15.1■□□□□ 0.01
MSH6-212ENST00000607272 ARHGEF10O15013 1369 aa15.1■□□□□ 0.01
MSH6-212ENST00000607272 TRIM6-TRIM34B2RNG4 842 aa15.09■□□□□ 0.01
MSH6-212ENST00000607272 F6X3S4 739 aa15.09■□□□□ 0.01
MSH6-212ENST00000607272 LETM1O95202 739 aaPredicted RBP15.09■□□□□ 0.01
MSH6-212ENST00000607272 RILPL2Q969X0 211 aa15.09■□□□□ 0.01
MSH6-212ENST00000607272 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.09■□□□□ 0.01
MSH6-212ENST00000607272 ATP8B2P98198 1209 aa15.09■□□□□ 0.01
MSH6-212ENST00000607272 G2E3Q7L622 706 aa15.09■□□□□ 0.01
MSH6-212ENST00000607272 USP48Q86UV5 1035 aa15.09■□□□□ 0.01
MSH6-212ENST00000607272 TMEM87AQ8NBN3 555 aa15.09■□□□□ 0.01
MSH6-212ENST00000607272 AOX1Q06278 1338 aa15.09■□□□□ 0.01
MSH6-212ENST00000607272 SETD1AO15047 1707 aaKnown RBP15.08■□□□□ 0.01
MSH6-212ENST00000607272 TSHZ3Q63HK5 1081 aa15.08■□□□□ 0
MSH6-212ENST00000607272 RTF1Q92541 710 aaKnown RBP15.08■□□□□ 0
MSH6-212ENST00000607272 STK31Q9BXU1 1019 aa15.08■□□□□ 0
MSH6-212ENST00000607272 TSPYL4Q9UJ04 414 aa15.08■□□□□ 0
MSH6-212ENST00000607272 C3P01024 1663 aa15.08■□□□□ 0
MSH6-212ENST00000607272 TXNDC2Q86VQ3 553 aa15.08■□□□□ 0
MSH6-212ENST00000607272 TTC21BQ7Z4L5 1316 aa15.08■□□□□ 0
MSH6-212ENST00000607272 NCKAP5LQ9HCH0 1330 aa15.08■□□□□ 0
MSH6-212ENST00000607272 PLEKHG5O94827 1062 aa15.07■□□□□ 0
MSH6-212ENST00000607272 CCDC183Q5T5S1 534 aa15.07■□□□□ 0
MSH6-212ENST00000607272 NOL8Q76FK4 1167 aaKnown RBP15.07■□□□□ 0
MSH6-212ENST00000607272 PRIMPOLQ96LW4 560 aa15.07■□□□□ 0
MSH6-212ENST00000607272 GADD45BO75293 160 aaPredicted RBP15.07■□□□□ 0
MSH6-212ENST00000607272 HMGN5P82970 282 aaKnown RBP15.07■□□□□ 0
MSH6-212ENST00000607272 MYRIPQ8NFW9 859 aa15.07■□□□□ 0
MSH6-212ENST00000607272 UPF3BQ9BZI7 483 aaKnown RBP15.07■□□□□ 0
MSH6-212ENST00000607272 HSPA4P34932 840 aa15.06■□□□□ 0
MSH6-212ENST00000607272 PIBF1Q8WXW3 757 aa15.06■□□□□ 0
MSH6-212ENST00000607272 MIS18AQ9NYP9 233 aa15.06■□□□□ 0
MSH6-212ENST00000607272 DNTTIP2Q5QJE6 756 aaKnown RBP15.05■□□□□ 0
MSH6-212ENST00000607272 GDPD2Q9HCC8 539 aa15.05■□□□□ 0
MSH6-212ENST00000607272 METP08581 1390 aa15.05■□□□□ 0
MSH6-212ENST00000607272 PNMA6EA0A0J9YXQ4 647 aa15.05■□□□□ -0
MSH6-212ENST00000607272 AKAP12Q02952 1782 aa15.04■□□□□ -0
MSH6-212ENST00000607272 HSP90AB2PQ58FF8 381 aa15.04■□□□□ -0
MSH6-212ENST00000607272 TECPR2O15040 1411 aa15.04■□□□□ -0
MSH6-212ENST00000607272 UBE2HP62256 183 aa15.04■□□□□ -0
MSH6-212ENST00000607272 FLIIQ13045 1269 aa15.04■□□□□ -0
MSH6-212ENST00000607272 NOLC1Q14978 699 aaKnown RBP eCLIP15.04■□□□□ -0
MSH6-212ENST00000607272 FOXD4L6Q3SYB3 417 aaPredicted RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms