RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 MYBBP1AQ9BQG0 1328 aaKnown RBP17.1■□□□□ 0.33
SHROOM1-207ENST00000606676 ZBTB7AO95365 584 aa17.09■□□□□ 0.33
SHROOM1-207ENST00000606676 SPON1Q9HCB6 807 aa17.09■□□□□ 0.33
SHROOM1-207ENST00000606676 TFCP2L1Q9NZI6 479 aa17.09■□□□□ 0.33
SHROOM1-207ENST00000606676 PNPLA7Q6ZV29 1317 aa17.09■□□□□ 0.33
SHROOM1-207ENST00000606676 ADAMTS7Q9UKP4 1686 aa17.09■□□□□ 0.33
SHROOM1-207ENST00000606676 SCN11AQ9UI33 1791 aa17.08■□□□□ 0.33
SHROOM1-207ENST00000606676 MRC1P22897 1456 aa17.08■□□□□ 0.32
SHROOM1-207ENST00000606676 MAP3K5Q99683 1374 aa17.08■□□□□ 0.32
SHROOM1-207ENST00000606676 GNAT3A8MTJ3 354 aa17.08■□□□□ 0.32
SHROOM1-207ENST00000606676 LINC00116Q8NCU8 138 aa17.08■□□□□ 0.32
SHROOM1-207ENST00000606676 IL17REQ8NFR9 667 aa17.08■□□□□ 0.32
SHROOM1-207ENST00000606676 ATP6V1AP38606 617 aa17.07■□□□□ 0.32
SHROOM1-207ENST00000606676 C5P01031 1676 aa17.07■□□□□ 0.32
SHROOM1-207ENST00000606676 HMGB2P26583 209 aaKnown RBP17.06■□□□□ 0.32
SHROOM1-207ENST00000606676 PTGER2P43116 358 aa17.06■□□□□ 0.32
SHROOM1-207ENST00000606676 AMIGO3Q86WK7 504 aa17.06■□□□□ 0.32
SHROOM1-207ENST00000606676 PLEKHF1Q96S99 279 aa17.06■□□□□ 0.32
SHROOM1-207ENST00000606676 ATF5Q9Y2D1 282 aaPredicted RBP17.06■□□□□ 0.32
SHROOM1-207ENST00000606676 PTCD1O75127 700 aaKnown RBP17.05■□□□□ 0.32
SHROOM1-207ENST00000606676 COL23A1Q86Y22 540 aaPredicted RBP17.05■□□□□ 0.32
SHROOM1-207ENST00000606676 RBM42Q9BTD8 480 aaKnown RBP17.05■□□□□ 0.32
SHROOM1-207ENST00000606676 MTFR1LQ9H019 292 aa17.05■□□□□ 0.32
SHROOM1-207ENST00000606676 TAF1LQ8IZX4 1826 aa17.05■□□□□ 0.32
SHROOM1-207ENST00000606676 CEMIPQ8WUJ3 1361 aa17.04■□□□□ 0.32
SHROOM1-207ENST00000606676 SGIP1Q9BQI5 828 aa17.04■□□□□ 0.32
SHROOM1-207ENST00000606676 C4BP0C0L5 1744 aa17.04■□□□□ 0.32
SHROOM1-207ENST00000606676 QSER1Q2KHR3 1735 aa17.04■□□□□ 0.32
SHROOM1-207ENST00000606676 TUBGCP6Q96RT7 1819 aa17.03■□□□□ 0.32
SHROOM1-207ENST00000606676 SLC39A6Q13433 755 aa17.03■□□□□ 0.32
SHROOM1-207ENST00000606676 SMIM5Q71RC9 77 aa17.03■□□□□ 0.32
SHROOM1-207ENST00000606676 SLC16A10Q8TF71 515 aa17.03■□□□□ 0.32
SHROOM1-207ENST00000606676 ZNF831Q5JPB2 1677 aa17.02■□□□□ 0.32
SHROOM1-207ENST00000606676 AK7Q96M32 723 aa17.02■□□□□ 0.32
SHROOM1-207ENST00000606676 HTATSF1O43719 755 aaKnown RBP17■□□□□ 0.31
SHROOM1-207ENST00000606676 TEFQ10587 303 aa17■□□□□ 0.31
SHROOM1-207ENST00000606676 RC3H1Q5TC82 1133 aaKnown RBP17■□□□□ 0.31
SHROOM1-207ENST00000606676 FLAD1Q8NFF5 587 aa17■□□□□ 0.31
SHROOM1-207ENST00000606676 KCPQ6ZWJ8 1503 aa17■□□□□ 0.31
SHROOM1-207ENST00000606676 DCTN1Q14203 1278 aa16.99■□□□□ 0.31
SHROOM1-207ENST00000606676 MCM10Q7L590 875 aa16.99■□□□□ 0.31
SHROOM1-207ENST00000606676 VIRMAQ69YN4 1812 aaKnown RBP16.98■□□□□ 0.31
SHROOM1-207ENST00000606676 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.98■□□□□ 0.31
SHROOM1-207ENST00000606676 GNPATO15228 680 aa16.98■□□□□ 0.31
SHROOM1-207ENST00000606676 MSH5O43196 834 aa16.98■□□□□ 0.31
SHROOM1-207ENST00000606676 PHF14O94880 888 aa16.98■□□□□ 0.31
SHROOM1-207ENST00000606676 SSFA2P28290 1259 aa16.98■□□□□ 0.31
SHROOM1-207ENST00000606676 NFE2L2Q16236 605 aa16.98■□□□□ 0.31
SHROOM1-207ENST00000606676 PNNQ9H307 717 aaKnown RBP16.98■□□□□ 0.31
SHROOM1-207ENST00000606676 PPP1R1BQ9UD71 204 aaPredicted RBP16.98■□□□□ 0.31
SHROOM1-207ENST00000606676 CNTNAP4Q9C0A0 1308 aa16.97■□□□□ 0.31
SHROOM1-207ENST00000606676 ZNF790Q6PG37 636 aa16.97■□□□□ 0.31
SHROOM1-207ENST00000606676 DNAJC10Q8IXB1 793 aa16.97■□□□□ 0.31
SHROOM1-207ENST00000606676 RTF1Q92541 710 aaKnown RBP16.97■□□□□ 0.31
SHROOM1-207ENST00000606676 UBR3Q6ZT12 1888 aa16.97■□□□□ 0.31
SHROOM1-207ENST00000606676 CICQ96RK0 1608 aaPredicted RBP16.96■□□□□ 0.31
SHROOM1-207ENST00000606676 COL5A3P25940 1745 aaPredicted RBP16.96■□□□□ 0.31
SHROOM1-207ENST00000606676 NEFMP07197 916 aa16.96■□□□□ 0.31
SHROOM1-207ENST00000606676 CRKLP46109 303 aaKnown RBP16.96■□□□□ 0.31
SHROOM1-207ENST00000606676 VSIG10Q8N0Z9 540 aa16.96■□□□□ 0.31
SHROOM1-207ENST00000606676 ZNF496Q96IT1 587 aaPredicted RBP16.96■□□□□ 0.31
SHROOM1-207ENST00000606676 ADAMTS8Q9UP79 889 aa16.96■□□□□ 0.31
SHROOM1-207ENST00000606676 SIPA1L3O60292 1781 aaPredicted RBP16.96■□□□□ 0.31
SHROOM1-207ENST00000606676 TJP1Q07157 1748 aa16.96■□□□□ 0.3
SHROOM1-207ENST00000606676 MAPK8IP3Q9UPT6 1336 aa16.96■□□□□ 0.3
SHROOM1-207ENST00000606676 BTBD11A6QL63 1104 aa16.95■□□□□ 0.3
SHROOM1-207ENST00000606676 KCNQ3O43525 872 aa16.95■□□□□ 0.3
SHROOM1-207ENST00000606676 RPS6KA4O75676 772 aa16.95■□□□□ 0.3
SHROOM1-207ENST00000606676 INTS5Q6P9B9 1019 aaKnown RBP16.95■□□□□ 0.3
SHROOM1-207ENST00000606676 TTC5Q8N0Z6 440 aa16.95■□□□□ 0.3
SHROOM1-207ENST00000606676 RTCBQ9Y3I0 505 aaKnown RBP16.95■□□□□ 0.3
SHROOM1-207ENST00000606676 COL24A1Q17RW2 1714 aa16.94■□□□□ 0.3
SHROOM1-207ENST00000606676 CYP19A1P11511 503 aaPredicted RBP16.94■□□□□ 0.3
SHROOM1-207ENST00000606676 WDR43Q15061 677 aaKnown RBP eCLIP16.94■□□□□ 0.3
SHROOM1-207ENST00000606676 CCDC184Q52MB2 194 aa16.94■□□□□ 0.3
SHROOM1-207ENST00000606676 MSL1Q68DK7 614 aa16.94■□□□□ 0.3
SHROOM1-207ENST00000606676 ARXQ96QS3 562 aa16.94■□□□□ 0.3
SHROOM1-207ENST00000606676 UBR2Q8IWV8 1755 aa16.93■□□□□ 0.3
SHROOM1-207ENST00000606676 CCDC146Q8IYE0 955 aa16.93■□□□□ 0.3
SHROOM1-207ENST00000606676 ARHGEF1Q92888 912 aaKnown RBP16.93■□□□□ 0.3
SHROOM1-207ENST00000606676 MYH14Q7Z406 1995 aaKnown RBP16.93■□□□□ 0.3
SHROOM1-207ENST00000606676 UTRNP46939 3433 aa16.93■□□□□ 0.3
SHROOM1-207ENST00000606676 GOLGB1Q14789 3259 aaKnown RBP16.92■□□□□ 0.3
SHROOM1-207ENST00000606676 HEG1Q9ULI3 1381 aa16.92■□□□□ 0.3
SHROOM1-207ENST00000606676 ADRA2BP18089 450 aa16.92■□□□□ 0.3
SHROOM1-207ENST00000606676 POLD1P28340 1107 aa16.92■□□□□ 0.3
SHROOM1-207ENST00000606676 TRAPPC3LQ5T215 181 aa16.92■□□□□ 0.3
SHROOM1-207ENST00000606676 FHDC1Q9C0D6 1143 aaPredicted RBP16.92■□□□□ 0.3
SHROOM1-207ENST00000606676 TMPOP42166 694 aaKnown RBP16.91■□□□□ 0.3
SHROOM1-207ENST00000606676 RIPK4P57078 832 aa16.91■□□□□ 0.3
SHROOM1-207ENST00000606676 TAF7Q15545 349 aaPredicted RBP16.91■□□□□ 0.3
SHROOM1-207ENST00000606676 RUNDC1Q96C34 613 aa16.91■□□□□ 0.3
SHROOM1-207ENST00000606676 FMNL2Q96PY5 1086 aa16.91■□□□□ 0.3
SHROOM1-207ENST00000606676 THUMPD2Q9BTF0 503 aaKnown RBP16.91■□□□□ 0.3
SHROOM1-207ENST00000606676 CCDC87Q9NVE4 849 aa16.91■□□□□ 0.3
SHROOM1-207ENST00000606676 SYT17Q9BSW7 474 aa16.9■□□□□ 0.3
SHROOM1-207ENST00000606676 MIS18AQ9NYP9 233 aa16.9■□□□□ 0.3
SHROOM1-207ENST00000606676 ANP32CO43423 234 aa16.89■□□□□ 0.29
SHROOM1-207ENST00000606676 ZBTB1Q9Y2K1 713 aa16.89■□□□□ 0.29
SHROOM1-207ENST00000606676 RRP7AQ9Y3A4 280 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms