RNA–Protein interactions for RNA: ENST00000606055.1

LINC00458-204, long intergenic non-protein coding RNA 458, humanhuman

TSL 3

Gene LINC00458, Length 425 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-204ENST00000606055 PLSCR1O15162 318 aa9.43□□□□□ -0.9
LINC00458-204ENST00000606055 KCNQ2O43526 872 aa9.43□□□□□ -0.9
LINC00458-204ENST00000606055 RTF1Q92541 710 aaKnown RBP9.43□□□□□ -0.9
LINC00458-204ENST00000606055 CAMKK2Q96RR4 588 aa9.43□□□□□ -0.9
LINC00458-204ENST00000606055 QSER1Q2KHR3 1735 aa9.42□□□□□ -0.9
LINC00458-204ENST00000606055 PRIM1P49642 420 aaKnown RBP9.42□□□□□ -0.9
LINC00458-204ENST00000606055 RIPK4P57078 832 aa9.42□□□□□ -0.9
LINC00458-204ENST00000606055 NBPF14Q5TI25 921 aa9.42□□□□□ -0.9
LINC00458-204ENST00000606055 TUBGCP6Q96RT7 1819 aa9.42□□□□□ -0.9
LINC00458-204ENST00000606055 C5P01031 1676 aa9.42□□□□□ -0.9
LINC00458-204ENST00000606055 SOS1Q07889 1333 aaPredicted RBP9.41□□□□□ -0.9
LINC00458-204ENST00000606055 PTF1AQ7RTS3 328 aa9.41□□□□□ -0.9
LINC00458-204ENST00000606055 WWC1Q8IX03 1113 aa9.41□□□□□ -0.9
LINC00458-204ENST00000606055 TRIM35Q9UPQ4 493 aa9.41□□□□□ -0.9
LINC00458-204ENST00000606055 RNMTO43148 476 aaKnown RBP9.4□□□□□ -0.9
LINC00458-204ENST00000606055 CHMP4AQ9BY43 222 aa9.4□□□□□ -0.9
LINC00458-204ENST00000606055 IFT57Q9NWB7 429 aa9.4□□□□□ -0.9
LINC00458-204ENST00000606055 SIPA1L3O60292 1781 aaPredicted RBP9.4□□□□□ -0.91
LINC00458-204ENST00000606055 KDM6AO15550 1401 aaPredicted RBP9.39□□□□□ -0.91
LINC00458-204ENST00000606055 ZNF853P0CG23 659 aa9.39□□□□□ -0.91
LINC00458-204ENST00000606055 TXNRD1Q16881 649 aa9.39□□□□□ -0.91
LINC00458-204ENST00000606055 MPRIPQ6WCQ1 1025 aa9.39□□□□□ -0.91
LINC00458-204ENST00000606055 CCDC146Q8IYE0 955 aa9.39□□□□□ -0.91
LINC00458-204ENST00000606055 IL17REQ8NFR9 667 aa9.39□□□□□ -0.91
LINC00458-204ENST00000606055 CFAP44Q96MT7 982 aa9.39□□□□□ -0.91
LINC00458-204ENST00000606055 SLC52A2Q9HAB3 445 aa9.39□□□□□ -0.91
LINC00458-204ENST00000606055 TMOD3Q9NYL9 352 aa9.39□□□□□ -0.91
LINC00458-204ENST00000606055 PAPPAQ13219 1627 aa9.38□□□□□ -0.91
LINC00458-204ENST00000606055 E9PSI1 815 aa9.38□□□□□ -0.91
LINC00458-204ENST00000606055 CHL1O00533 1208 aa9.38□□□□□ -0.91
LINC00458-204ENST00000606055 GNAI1P63096 354 aa9.38□□□□□ -0.91
LINC00458-204ENST00000606055 TAF7Q15545 349 aaPredicted RBP9.38□□□□□ -0.91
LINC00458-204ENST00000606055 TRMT2AQ8IZ69 625 aaKnown RBP9.38□□□□□ -0.91
LINC00458-204ENST00000606055 ZNF831Q5JPB2 1677 aa9.38□□□□□ -0.91
LINC00458-204ENST00000606055 PSDA5PKW4 1024 aaPredicted RBP9.37□□□□□ -0.91
LINC00458-204ENST00000606055 CT47B1P0C2W7 299 aaPredicted RBP9.37□□□□□ -0.91
LINC00458-204ENST00000606055 HNRNPUQ00839 825 aaKnown RBP eCLIP9.37□□□□□ -0.91
LINC00458-204ENST00000606055 GOLGA2Q08379 1002 aa9.37□□□□□ -0.91
LINC00458-204ENST00000606055 TEFQ10587 303 aa9.37□□□□□ -0.91
LINC00458-204ENST00000606055 SLC27A3Q5K4L6 730 aa9.37□□□□□ -0.91
LINC00458-204ENST00000606055 SMARCC1Q92922 1105 aaPredicted RBP9.37□□□□□ -0.91
LINC00458-204ENST00000606055 ZNF428Q96B54 188 aa9.37□□□□□ -0.91
LINC00458-204ENST00000606055 MYH16Q9H6N6 1097 aa9.37□□□□□ -0.91
LINC00458-204ENST00000606055 STK32BQ9NY57 414 aa9.37□□□□□ -0.91
LINC00458-204ENST00000606055 CASZ1Q86V15 1759 aa9.37□□□□□ -0.91
LINC00458-204ENST00000606055 PALLDQ8WX93 1383 aa9.37□□□□□ -0.91
LINC00458-204ENST00000606055 COL5A3P25940 1745 aaPredicted RBP9.36□□□□□ -0.91
LINC00458-204ENST00000606055 UBR3Q6ZT12 1888 aa9.36□□□□□ -0.91
LINC00458-204ENST00000606055 HOXB7P09629 217 aa9.36□□□□□ -0.91
LINC00458-204ENST00000606055 CABP4P57796 275 aa9.36□□□□□ -0.91
LINC00458-204ENST00000606055 R3HDM1Q15032 1099 aaKnown RBP9.36□□□□□ -0.91
LINC00458-204ENST00000606055 VSIG10Q8N0Z9 540 aa9.36□□□□□ -0.91
LINC00458-204ENST00000606055 PIGBQ92521 554 aa9.36□□□□□ -0.91
LINC00458-204ENST00000606055 CCNL1Q9UK58 526 aaPredicted RBP9.36□□□□□ -0.91
LINC00458-204ENST00000606055 C4BP0C0L5 1744 aa9.36□□□□□ -0.91
LINC00458-204ENST00000606055 HEG1Q9ULI3 1381 aa9.36□□□□□ -0.91
LINC00458-204ENST00000606055 LRP5O75197 1615 aa9.35□□□□□ -0.91
LINC00458-204ENST00000606055 UBR2Q8IWV8 1755 aa9.35□□□□□ -0.91
LINC00458-204ENST00000606055 PROM2Q8N271 834 aa9.35□□□□□ -0.91
LINC00458-204ENST00000606055 LGR6Q9HBX8 967 aa9.35□□□□□ -0.91
LINC00458-204ENST00000606055 MYH14Q7Z406 1995 aaKnown RBP9.35□□□□□ -0.91
LINC00458-204ENST00000606055 CICQ96RK0 1608 aaPredicted RBP9.34□□□□□ -0.91
LINC00458-204ENST00000606055 SLFN5Q08AF3 891 aa9.34□□□□□ -0.91
LINC00458-204ENST00000606055 NEUROD2Q15784 382 aa9.34□□□□□ -0.91
LINC00458-204ENST00000606055 MCM10Q7L590 875 aa9.34□□□□□ -0.91
LINC00458-204ENST00000606055 TEX13AQ9BXU3 409 aaPredicted RBP9.34□□□□□ -0.91
LINC00458-204ENST00000606055 RRP7AQ9Y3A4 280 aaKnown RBP9.34□□□□□ -0.91
LINC00458-204ENST00000606055 TJP1Q07157 1748 aa9.34□□□□□ -0.92
LINC00458-204ENST00000606055 BTBD11A6QL63 1104 aa9.33□□□□□ -0.92
LINC00458-204ENST00000606055 ZNF790Q6PG37 636 aa9.33□□□□□ -0.92
LINC00458-204ENST00000606055 NFATC2IPQ8NCF5 419 aa9.33□□□□□ -0.92
LINC00458-204ENST00000606055 ANO8Q9HCE9 1232 aaPredicted RBP9.33□□□□□ -0.92
LINC00458-204ENST00000606055 SLC15A2Q16348 729 aa9.32□□□□□ -0.92
LINC00458-204ENST00000606055 LRRC4BQ9NT99 713 aa9.32□□□□□ -0.92
LINC00458-204ENST00000606055 ASAP1Q9ULH1 1129 aa9.32□□□□□ -0.92
LINC00458-204ENST00000606055 KDM3BQ7LBC6 1761 aa9.32□□□□□ -0.92
LINC00458-204ENST00000606055 ERBB4Q15303 1308 aa9.31□□□□□ -0.92
LINC00458-204ENST00000606055 LOC102724428A0A0B4J2F2 783 aa9.31□□□□□ -0.92
LINC00458-204ENST00000606055 KCNQ4P56696 695 aa9.31□□□□□ -0.92
LINC00458-204ENST00000606055 SIK1P57059 783 aa9.31□□□□□ -0.92
LINC00458-204ENST00000606055 DCTN1Q14203 1278 aa9.31□□□□□ -0.92
LINC00458-204ENST00000606055 DUSP27Q5VZP5 1158 aa9.31□□□□□ -0.92
LINC00458-204ENST00000606055 TTC5Q8N0Z6 440 aa9.31□□□□□ -0.92
LINC00458-204ENST00000606055 FMNL2Q96PY5 1086 aa9.31□□□□□ -0.92
LINC00458-204ENST00000606055 RBM42Q9BTD8 480 aaKnown RBP9.31□□□□□ -0.92
LINC00458-204ENST00000606055 MBIPQ9NS73 344 aa9.31□□□□□ -0.92
LINC00458-204ENST00000606055 ATG3Q9NT62 314 aa9.31□□□□□ -0.92
LINC00458-204ENST00000606055 TSPYL4Q9UJ04 414 aa9.31□□□□□ -0.92
LINC00458-204ENST00000606055 FANCIQ9NVI1 1328 aa9.31□□□□□ -0.92
LINC00458-204ENST00000606055 ATP6V1AP38606 617 aa9.3□□□□□ -0.92
LINC00458-204ENST00000606055 BRPF1P55201 1214 aaPredicted RBP9.3□□□□□ -0.92
LINC00458-204ENST00000606055 EIF4A1P60842 406 aaKnown RBP9.3□□□□□ -0.92
LINC00458-204ENST00000606055 ZNF827Q17R98 1081 aa9.3□□□□□ -0.92
LINC00458-204ENST00000606055 AK7Q96M32 723 aa9.3□□□□□ -0.92
LINC00458-204ENST00000606055 TFCP2L1Q9NZI6 479 aa9.3□□□□□ -0.92
LINC00458-204ENST00000606055 COL24A1Q17RW2 1714 aa9.3□□□□□ -0.92
LINC00458-204ENST00000606055 KCPQ6ZWJ8 1503 aa9.3□□□□□ -0.92
LINC00458-204ENST00000606055 LAMB4A4D0S4 1761 aa9.29□□□□□ -0.92
LINC00458-204ENST00000606055 C4AP0C0L4 1744 aa9.29□□□□□ -0.92
LINC00458-204ENST00000606055 RGL2O15211 777 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms