RNA–Protein interactions for RNA: ENST00000604864.5

NEB-219, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-219ENST00000604864 TACC1O75410 805 aa3.94□□□□□ -1.78
NEB-219ENST00000604864 BRD2P25440 801 aaKnown RBP3.94□□□□□ -1.78
NEB-219ENST00000604864 PPP1R12AO14974 1030 aaPredicted RBP3.94□□□□□ -1.78
NEB-219ENST00000604864 ATP2A2P16615 1042 aaKnown RBP3.94□□□□□ -1.78
NEB-219ENST00000604864 CFAP58Q5T655 872 aa3.94□□□□□ -1.78
NEB-219ENST00000604864 GPR161Q8N6U8 529 aaKnown RBP3.94□□□□□ -1.78
NEB-219ENST00000604864 POGKQ9P215 609 aa3.94□□□□□ -1.78
NEB-219ENST00000604864 EPB41L2O43491 1005 aaKnown RBP3.94□□□□□ -1.78
NEB-219ENST00000604864 CAPN2P17655 700 aa3.94□□□□□ -1.78
NEB-219ENST00000604864 KRT32Q14532 448 aa3.94□□□□□ -1.78
NEB-219ENST00000604864 TSC1Q92574 1164 aa3.94□□□□□ -1.78
NEB-219ENST00000604864 ARHGAP18Q8N392 663 aa3.94□□□□□ -1.78
NEB-219ENST00000604864 TEX14Q8IWB6 1497 aa3.94□□□□□ -1.78
NEB-219ENST00000604864 SMC1BQ8NDV3 1235 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 NCAPD3P42695 1498 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 GBP1P32455 592 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 TCHPQ9BT92 498 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 HDAC9Q9UKV0 1011 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 ADCY5O95622 1261 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 NBPF11Q86T75 865 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 TICAM2Q86XR7 235 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 ZMYM3Q14202 1370 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 ATP5HO75947 161 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 SNAPC5O75971 98 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 ZC3H15Q8WU90 426 aaKnown RBP3.93□□□□□ -1.78
NEB-219ENST00000604864 ZNF777Q9ULD5 760 aaPredicted RBP3.93□□□□□ -1.78
NEB-219ENST00000604864 STIM1Q13586 685 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 KINO60870 393 aaKnown RBP3.93□□□□□ -1.78
NEB-219ENST00000604864 PPP2R5BQ15173 497 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 PABPN1Q86U42 306 aaKnown RBP eCLIP3.93□□□□□ -1.78
NEB-219ENST00000604864 IFIT2P09913 472 aaKnown RBP3.93□□□□□ -1.78
NEB-219ENST00000604864 CCDC175P0C221 793 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 CCDC26Q8TAB7 109 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 EXOC6Q8TAG9 804 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 RAPGEF2Q9Y4G8 1499 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 CCDC141Q6ZP82 1450 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 WDR7Q9Y4E6 1490 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 GTF2F1P35269 517 aaKnown RBP eCLIP3.93□□□□□ -1.78
NEB-219ENST00000604864 PCK1P35558 622 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 PDE6BP35913 854 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 ACTN4O43707 911 aaKnown RBP3.93□□□□□ -1.78
NEB-219ENST00000604864 NCBP3Q53F19 620 aaKnown RBP3.93□□□□□ -1.78
NEB-219ENST00000604864 WDR66Q8TBY9 1149 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 BRMS1Q9HCU9 246 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 ARHGEF12Q9NZN5 1544 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 CHGAP10645 457 aaKnown RBP3.93□□□□□ -1.78
NEB-219ENST00000604864 CCDC181Q5TID7 509 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 PHLDB2Q86SQ0 1253 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 UPF3BQ9BZI7 483 aaKnown RBP3.93□□□□□ -1.78
NEB-219ENST00000604864 LRRFIP2Q9Y608 721 aaKnown RBP3.93□□□□□ -1.78
NEB-219ENST00000604864 KIF7Q2M1P5 1343 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 GRIPAP1Q4V328 841 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.93□□□□□ -1.78
NEB-219ENST00000604864 CTAGE9A4FU28 777 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 BRD3Q15059 726 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 AKAP2Q9Y2D5 859 aa3.93□□□□□ -1.78
NEB-219ENST00000604864 IFFO1Q0D2I5 559 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 TRAF1Q13077 416 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 APLFQ8IW19 511 aaPredicted RBP3.92□□□□□ -1.78
NEB-219ENST00000604864 GNAI3P08754 354 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 EIF5P55010 431 aaKnown RBP3.92□□□□□ -1.78
NEB-219ENST00000604864 MAP7Q14244 749 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 ARHGAP45Q92619 1136 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 RUNDC1Q96C34 613 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 CECR2Q9BXF3 1484 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 FCHSD2O94868 740 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 ESRRBO95718 433 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 MCF2L2Q86YR7 1114 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 RILPL2Q969X0 211 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 MYCBPQ99417 103 aaPredicted RBP3.92□□□□□ -1.78
NEB-219ENST00000604864 MPHOSPH8Q99549 860 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 CTAGE15A4D2H0 777 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 EIF2S2P20042 333 aaKnown RBP3.92□□□□□ -1.78
NEB-219ENST00000604864 NBPF10Q6P3W6 841 aaKnown RBP3.92□□□□□ -1.78
NEB-219ENST00000604864 A0A1B0GVL5 298 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 HSF2BPO75031 334 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 GMNNO75496 209 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 UBE2HP62256 183 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 CCDC174Q6PII3 467 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 SETDB1Q15047 1291 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 PRKRIP1Q9H875 184 aaPredicted RBP3.92□□□□□ -1.78
NEB-219ENST00000604864 TTC31Q49AM3 519 aaPredicted RBP3.92□□□□□ -1.78
NEB-219ENST00000604864 SLC3A2P08195 630 aaKnown RBP3.92□□□□□ -1.78
NEB-219ENST00000604864 ISM2Q6H9L7 571 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 MAATS1Q7Z4T9 603 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 KIF9Q9HAQ2 790 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 HNRNPMP52272 730 aaKnown RBP eCLIP3.92□□□□□ -1.78
NEB-219ENST00000604864 WWC3Q9ULE0 1092 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 SMIM24O75264 130 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 CASTP20810 708 aaKnown RBP3.92□□□□□ -1.78
NEB-219ENST00000604864 TAF4BQ92750 862 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 TNMDQ9H2S6 317 aa3.92□□□□□ -1.78
NEB-219ENST00000604864 GNG11P61952 73 aa3.91□□□□□ -1.78
NEB-219ENST00000604864 ATP11AP98196 1134 aa3.91□□□□□ -1.78
NEB-219ENST00000604864 NBPF9Q3BBW0 867 aa3.91□□□□□ -1.78
NEB-219ENST00000604864 ENO4A6NNW6 628 aa3.91□□□□□ -1.78
NEB-219ENST00000604864 DNMBPQ6XZF7 1577 aa3.91□□□□□ -1.78
NEB-219ENST00000604864 CHD1LQ86WJ1 897 aa3.91□□□□□ -1.78
NEB-219ENST00000604864 PIP4K2CQ8TBX8 421 aa3.91□□□□□ -1.78
NEB-219ENST00000604864 SPDYE4A6NLX3 237 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms