RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 TACC1O75410 805 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 BRD2P25440 801 aaKnown RBP3.94□□□□□ -1.78
NEB-218ENST00000603639 PPP1R12AO14974 1030 aaPredicted RBP3.94□□□□□ -1.78
NEB-218ENST00000603639 ATP2A2P16615 1042 aaKnown RBP3.94□□□□□ -1.78
NEB-218ENST00000603639 CFAP58Q5T655 872 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 GPR161Q8N6U8 529 aaKnown RBP3.94□□□□□ -1.78
NEB-218ENST00000603639 POGKQ9P215 609 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 EPB41L2O43491 1005 aaKnown RBP3.94□□□□□ -1.78
NEB-218ENST00000603639 CAPN2P17655 700 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 KRT32Q14532 448 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 TSC1Q92574 1164 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 ARHGAP18Q8N392 663 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 TEX14Q8IWB6 1497 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 SMC1BQ8NDV3 1235 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 NCAPD3P42695 1498 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 GBP1P32455 592 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 TCHPQ9BT92 498 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 HDAC9Q9UKV0 1011 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 ADCY5O95622 1261 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 NBPF11Q86T75 865 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 TICAM2Q86XR7 235 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 ZMYM3Q14202 1370 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 ATP5HO75947 161 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 SNAPC5O75971 98 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 ZC3H15Q8WU90 426 aaKnown RBP3.93□□□□□ -1.78
NEB-218ENST00000603639 ZNF777Q9ULD5 760 aaPredicted RBP3.93□□□□□ -1.78
NEB-218ENST00000603639 STIM1Q13586 685 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 KINO60870 393 aaKnown RBP3.93□□□□□ -1.78
NEB-218ENST00000603639 PPP2R5BQ15173 497 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 PABPN1Q86U42 306 aaKnown RBP eCLIP3.93□□□□□ -1.78
NEB-218ENST00000603639 IFIT2P09913 472 aaKnown RBP3.93□□□□□ -1.78
NEB-218ENST00000603639 CCDC175P0C221 793 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 CCDC26Q8TAB7 109 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 EXOC6Q8TAG9 804 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 RAPGEF2Q9Y4G8 1499 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 CCDC141Q6ZP82 1450 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 WDR7Q9Y4E6 1490 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 GTF2F1P35269 517 aaKnown RBP eCLIP3.93□□□□□ -1.78
NEB-218ENST00000603639 PCK1P35558 622 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 PDE6BP35913 854 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 ACTN4O43707 911 aaKnown RBP3.93□□□□□ -1.78
NEB-218ENST00000603639 NCBP3Q53F19 620 aaKnown RBP3.93□□□□□ -1.78
NEB-218ENST00000603639 WDR66Q8TBY9 1149 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 BRMS1Q9HCU9 246 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 ARHGEF12Q9NZN5 1544 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 CHGAP10645 457 aaKnown RBP3.93□□□□□ -1.78
NEB-218ENST00000603639 CCDC181Q5TID7 509 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 PHLDB2Q86SQ0 1253 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 UPF3BQ9BZI7 483 aaKnown RBP3.93□□□□□ -1.78
NEB-218ENST00000603639 LRRFIP2Q9Y608 721 aaKnown RBP3.93□□□□□ -1.78
NEB-218ENST00000603639 KIF7Q2M1P5 1343 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 GRIPAP1Q4V328 841 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.93□□□□□ -1.78
NEB-218ENST00000603639 CTAGE9A4FU28 777 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 BRD3Q15059 726 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 AKAP2Q9Y2D5 859 aa3.93□□□□□ -1.78
NEB-218ENST00000603639 IFFO1Q0D2I5 559 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 TRAF1Q13077 416 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 APLFQ8IW19 511 aaPredicted RBP3.92□□□□□ -1.78
NEB-218ENST00000603639 GNAI3P08754 354 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 EIF5P55010 431 aaKnown RBP3.92□□□□□ -1.78
NEB-218ENST00000603639 MAP7Q14244 749 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 ARHGAP45Q92619 1136 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 RUNDC1Q96C34 613 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 CECR2Q9BXF3 1484 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 FCHSD2O94868 740 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 ESRRBO95718 433 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 MCF2L2Q86YR7 1114 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 RILPL2Q969X0 211 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 MYCBPQ99417 103 aaPredicted RBP3.92□□□□□ -1.78
NEB-218ENST00000603639 MPHOSPH8Q99549 860 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 CTAGE15A4D2H0 777 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 EIF2S2P20042 333 aaKnown RBP3.92□□□□□ -1.78
NEB-218ENST00000603639 NBPF10Q6P3W6 841 aaKnown RBP3.92□□□□□ -1.78
NEB-218ENST00000603639 A0A1B0GVL5 298 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 HSF2BPO75031 334 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 GMNNO75496 209 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 UBE2HP62256 183 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 CCDC174Q6PII3 467 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 SETDB1Q15047 1291 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 PRKRIP1Q9H875 184 aaPredicted RBP3.92□□□□□ -1.78
NEB-218ENST00000603639 TTC31Q49AM3 519 aaPredicted RBP3.92□□□□□ -1.78
NEB-218ENST00000603639 SLC3A2P08195 630 aaKnown RBP3.92□□□□□ -1.78
NEB-218ENST00000603639 ISM2Q6H9L7 571 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 MAATS1Q7Z4T9 603 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 KIF9Q9HAQ2 790 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 HNRNPMP52272 730 aaKnown RBP eCLIP3.92□□□□□ -1.78
NEB-218ENST00000603639 WWC3Q9ULE0 1092 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 SMIM24O75264 130 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 CASTP20810 708 aaKnown RBP3.92□□□□□ -1.78
NEB-218ENST00000603639 TAF4BQ92750 862 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 TNMDQ9H2S6 317 aa3.92□□□□□ -1.78
NEB-218ENST00000603639 GNG11P61952 73 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 ATP11AP98196 1134 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 NBPF9Q3BBW0 867 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 ENO4A6NNW6 628 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 DNMBPQ6XZF7 1577 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 CHD1LQ86WJ1 897 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 PIP4K2CQ8TBX8 421 aa3.91□□□□□ -1.78
NEB-218ENST00000603639 SPDYE4A6NLX3 237 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms