RNA–Protein interactions for RNA: ENST00000602960.1

PRAMEF20-202, Transcript of PRAME family member 20, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRAMEF20, Length 1,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF20-202ENST00000602960 SENP3-EIF4A1A0A087X0R7 540 aa16.37■□□□□ 0.21
PRAMEF20-202ENST00000602960 PTF1AQ7RTS3 328 aa16.37■□□□□ 0.21
PRAMEF20-202ENST00000602960 WWC1Q8IX03 1113 aa16.37■□□□□ 0.21
PRAMEF20-202ENST00000602960 THUMPD2Q9BTF0 503 aaKnown RBP16.37■□□□□ 0.21
PRAMEF20-202ENST00000602960 CALD1Q05682 793 aaKnown RBP16.36■□□□□ 0.21
PRAMEF20-202ENST00000602960 SF3B2Q13435 895 aaKnown RBP16.36■□□□□ 0.21
PRAMEF20-202ENST00000602960 SALL2Q9Y467 1007 aaPredicted RBP16.36■□□□□ 0.21
PRAMEF20-202ENST00000602960 TAF7Q15545 349 aaPredicted RBP16.35■□□□□ 0.21
PRAMEF20-202ENST00000602960 APBA3O96018 575 aa16.35■□□□□ 0.21
PRAMEF20-202ENST00000602960 UPF1Q92900 1129 aaKnown RBP eCLIP16.35■□□□□ 0.21
PRAMEF20-202ENST00000602960 RGPD3A6NKT7 1758 aaPredicted RBP16.34■□□□□ 0.21
PRAMEF20-202ENST00000602960 RGPD4Q7Z3J3 1758 aa16.34■□□□□ 0.21
PRAMEF20-202ENST00000602960 PAPPAQ13219 1627 aa16.34■□□□□ 0.21
PRAMEF20-202ENST00000602960 BTBD11A6QL63 1104 aa16.34■□□□□ 0.21
PRAMEF20-202ENST00000602960 PLSCR1O15162 318 aa16.34■□□□□ 0.21
PRAMEF20-202ENST00000602960 SMARCC1Q92922 1105 aaPredicted RBP16.34■□□□□ 0.21
PRAMEF20-202ENST00000602960 WDR63Q8IWG1 891 aa16.33■□□□□ 0.2
PRAMEF20-202ENST00000602960 ATG3Q9NT62 314 aa16.33■□□□□ 0.2
PRAMEF20-202ENST00000602960 BABAM1Q9NWV8 329 aa16.33■□□□□ 0.2
PRAMEF20-202ENST00000602960 ASAP1Q9ULH1 1129 aa16.33■□□□□ 0.2
PRAMEF20-202ENST00000602960 LY75O60449 1722 aa16.32■□□□□ 0.2
PRAMEF20-202ENST00000602960 BAG6P46379 1132 aa16.32■□□□□ 0.2
PRAMEF20-202ENST00000602960 HNRNPUQ00839 825 aaKnown RBP eCLIP16.32■□□□□ 0.2
PRAMEF20-202ENST00000602960 KDM3BQ7LBC6 1761 aa16.32■□□□□ 0.2
PRAMEF20-202ENST00000602960 ZNF521Q96K83 1311 aa16.32■□□□□ 0.2
PRAMEF20-202ENST00000602960 ZNF790Q6PG37 636 aa16.31■□□□□ 0.2
PRAMEF20-202ENST00000602960 TTC5Q8N0Z6 440 aa16.31■□□□□ 0.2
PRAMEF20-202ENST00000602960 CFAP44Q96MT7 982 aa16.31■□□□□ 0.2
PRAMEF20-202ENST00000602960 PALLDQ8WX93 1383 aa16.31■□□□□ 0.2
PRAMEF20-202ENST00000602960 UBR2Q8IWV8 1755 aa16.31■□□□□ 0.2
PRAMEF20-202ENST00000602960 IL16Q14005 1332 aa16.31■□□□□ 0.2
PRAMEF20-202ENST00000602960 GNAI1P63096 354 aa16.3■□□□□ 0.2
PRAMEF20-202ENST00000602960 SLC39A6Q13433 755 aa16.3■□□□□ 0.2
PRAMEF20-202ENST00000602960 IFT57Q9NWB7 429 aa16.3■□□□□ 0.2
PRAMEF20-202ENST00000602960 CHL1O00533 1208 aa16.29■□□□□ 0.2
PRAMEF20-202ENST00000602960 TSPYL4Q9UJ04 414 aa16.29■□□□□ 0.2
PRAMEF20-202ENST00000602960 LAS1LQ9Y4W2 734 aaKnown RBP16.29■□□□□ 0.2
PRAMEF20-202ENST00000602960 ZNF853P0CG23 659 aa16.29■□□□□ 0.2
PRAMEF20-202ENST00000602960 MIS18AQ9NYP9 233 aa16.29■□□□□ 0.2
PRAMEF20-202ENST00000602960 ZNF831Q5JPB2 1677 aa16.29■□□□□ 0.2
PRAMEF20-202ENST00000602960 KCPQ6ZWJ8 1503 aa16.28■□□□□ 0.2
PRAMEF20-202ENST00000602960 EN1Q05925 392 aaPredicted RBP16.28■□□□□ 0.2
PRAMEF20-202ENST00000602960 LOC102724428A0A0B4J2F2 783 aa16.27■□□□□ 0.2
PRAMEF20-202ENST00000602960 PTCD1O75127 700 aaKnown RBP16.27■□□□□ 0.2
PRAMEF20-202ENST00000602960 SIK1P57059 783 aa16.27■□□□□ 0.2
PRAMEF20-202ENST00000602960 DEFB132Q7Z7B7 95 aa16.27■□□□□ 0.2
PRAMEF20-202ENST00000602960 CAMKK2Q96RR4 588 aa16.27■□□□□ 0.2
PRAMEF20-202ENST00000602960 KCNQ3O43525 872 aa16.26■□□□□ 0.19
PRAMEF20-202ENST00000602960 GOLGA2Q08379 1002 aa16.26■□□□□ 0.19
PRAMEF20-202ENST00000602960 TXNRD1Q16881 649 aa16.26■□□□□ 0.19
PRAMEF20-202ENST00000602960 SLC27A3Q5K4L6 730 aa16.26■□□□□ 0.19
PRAMEF20-202ENST00000602960 FMNL2Q96PY5 1086 aa16.26■□□□□ 0.19
PRAMEF20-202ENST00000602960 RBM42Q9BTD8 480 aaKnown RBP16.26■□□□□ 0.19
PRAMEF20-202ENST00000602960 ZBED9Q6R2W3 1325 aa16.26■□□□□ 0.19
PRAMEF20-202ENST00000602960 CICQ96RK0 1608 aaPredicted RBP16.26■□□□□ 0.19
PRAMEF20-202ENST00000602960 RREB1Q92766 1687 aa16.25■□□□□ 0.19
PRAMEF20-202ENST00000602960 HMGB2P26583 209 aaKnown RBP16.25■□□□□ 0.19
PRAMEF20-202ENST00000602960 EZH2Q15910 746 aaKnown RBP16.25■□□□□ 0.19
PRAMEF20-202ENST00000602960 VSIG10Q8N0Z9 540 aa16.25■□□□□ 0.19
PRAMEF20-202ENST00000602960 ZNF496Q96IT1 587 aaPredicted RBP16.25■□□□□ 0.19
PRAMEF20-202ENST00000602960 MBIPQ9NS73 344 aa16.25■□□□□ 0.19
PRAMEF20-202ENST00000602960 CCNL1Q9UK58 526 aaPredicted RBP16.25■□□□□ 0.19
PRAMEF20-202ENST00000602960 EIF4A1P60842 406 aaKnown RBP16.24■□□□□ 0.19
PRAMEF20-202ENST00000602960 PROM2Q8N271 834 aa16.24■□□□□ 0.19
PRAMEF20-202ENST00000602960 HEG1Q9ULI3 1381 aa16.24■□□□□ 0.19
PRAMEF20-202ENST00000602960 E9PSI1 815 aa16.24■□□□□ 0.19
PRAMEF20-202ENST00000602960 SOCS7O14512 581 aa16.24■□□□□ 0.19
PRAMEF20-202ENST00000602960 ATP6V1AP38606 617 aa16.24■□□□□ 0.19
PRAMEF20-202ENST00000602960 MYH16Q9H6N6 1097 aa16.24■□□□□ 0.19
PRAMEF20-202ENST00000602960 TAF1LQ8IZX4 1826 aa16.23■□□□□ 0.19
PRAMEF20-202ENST00000602960 SLC4A9Q96Q91 983 aa16.23■□□□□ 0.19
PRAMEF20-202ENST00000602960 SPINK5Q9NQ38 1064 aaPredicted RBP16.23■□□□□ 0.19
PRAMEF20-202ENST00000602960 C5P01031 1676 aa16.22■□□□□ 0.19
PRAMEF20-202ENST00000602960 TJP1Q07157 1748 aa16.22■□□□□ 0.19
PRAMEF20-202ENST00000602960 TSR2Q969E8 191 aaKnown RBP16.22■□□□□ 0.19
PRAMEF20-202ENST00000602960 LRRC4BQ9NT99 713 aa16.22■□□□□ 0.19
PRAMEF20-202ENST00000602960 FANCIQ9NVI1 1328 aa16.22■□□□□ 0.19
PRAMEF20-202ENST00000602960 COL5A3P25940 1745 aaPredicted RBP16.22■□□□□ 0.19
PRAMEF20-202ENST00000602960 SNRPA1P09661 255 aaKnown RBP16.21■□□□□ 0.19
PRAMEF20-202ENST00000602960 SLFN5Q08AF3 891 aa16.21■□□□□ 0.19
PRAMEF20-202ENST00000602960 TEX13AQ9BXU3 409 aaPredicted RBP16.21■□□□□ 0.19
PRAMEF20-202ENST00000602960 NUP188Q5SRE5 1749 aa16.21■□□□□ 0.19
PRAMEF20-202ENST00000602960 GIGYF1O75420 1035 aaPredicted RBP16.2■□□□□ 0.18
PRAMEF20-202ENST00000602960 KCNQ4P56696 695 aa16.2■□□□□ 0.18
PRAMEF20-202ENST00000602960 ITPK1Q13572 414 aa16.2■□□□□ 0.18
PRAMEF20-202ENST00000602960 LAMB4A4D0S4 1761 aa16.2■□□□□ 0.18
PRAMEF20-202ENST00000602960 CDCA7LQ96GN5 454 aa16.19■□□□□ 0.18
PRAMEF20-202ENST00000602960 DNAJC10Q8IXB1 793 aa16.19■□□□□ 0.18
PRAMEF20-202ENST00000602960 TRMT2AQ8IZ69 625 aaKnown RBP16.19■□□□□ 0.18
PRAMEF20-202ENST00000602960 YTHDC1Q96MU7 727 aaKnown RBP16.19■□□□□ 0.18
PRAMEF20-202ENST00000602960 C4BP0C0L5 1744 aa16.18■□□□□ 0.18
PRAMEF20-202ENST00000602960 STARD3NLO95772 234 aa16.18■□□□□ 0.18
PRAMEF20-202ENST00000602960 HOXB7P09629 217 aa16.18■□□□□ 0.18
PRAMEF20-202ENST00000602960 LINC00116Q8NCU8 138 aa16.18■□□□□ 0.18
PRAMEF20-202ENST00000602960 SOS1Q07889 1333 aaPredicted RBP16.17■□□□□ 0.18
PRAMEF20-202ENST00000602960 PRAMEF22A3QJZ6 481 aa16.17■□□□□ 0.18
PRAMEF20-202ENST00000602960 KRT24Q2M2I5 525 aa16.17■□□□□ 0.18
PRAMEF20-202ENST00000602960 CYP19A1P11511 503 aaPredicted RBP16.16■□□□□ 0.18
PRAMEF20-202ENST00000602960 DUSP27Q5VZP5 1158 aa16.16■□□□□ 0.18
PRAMEF20-202ENST00000602960 C8orf58Q8NAV2 365 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms