RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 NOL7Q9UMY1 257 aaKnown RBP18.77■□□□□ 0.59
PPFIA3-206ENST00000602655 VAMP4O75379 141 aa18.76■□□□□ 0.59
PPFIA3-206ENST00000602655 NUTM2BA6NNL0 878 aaPredicted RBP18.76■□□□□ 0.59
PPFIA3-206ENST00000602655 NUTM2EB1AL46 878 aaPredicted RBP18.76■□□□□ 0.59
PPFIA3-206ENST00000602655 TPRNQ4KMQ1 711 aa18.76■□□□□ 0.59
PPFIA3-206ENST00000602655 NUTM2AQ8IVF1 878 aaPredicted RBP18.76■□□□□ 0.59
PPFIA3-206ENST00000602655 GTPBP4Q9BZE4 634 aaKnown RBP18.76■□□□□ 0.59
PPFIA3-206ENST00000602655 PRDM11Q9NQV5 511 aa18.76■□□□□ 0.59
PPFIA3-206ENST00000602655 LMOD3Q0VAK6 560 aa18.76■□□□□ 0.59
PPFIA3-206ENST00000602655 SLC39A6Q13433 755 aa18.76■□□□□ 0.59
PPFIA3-206ENST00000602655 DDX54Q8TDD1 881 aaKnown RBP18.76■□□□□ 0.59
PPFIA3-206ENST00000602655 SSFA2P28290 1259 aa18.75■□□□□ 0.59
PPFIA3-206ENST00000602655 ZNF830Q96NB3 372 aaPredicted RBP18.75■□□□□ 0.59
PPFIA3-206ENST00000602655 RWDD1Q9H446 243 aaPredicted RBP18.75■□□□□ 0.59
PPFIA3-206ENST00000602655 TECPR2O15040 1411 aa18.75■□□□□ 0.59
PPFIA3-206ENST00000602655 FLT4P35916 1363 aa18.75■□□□□ 0.59
PPFIA3-206ENST00000602655 LETM1O95202 739 aaPredicted RBP18.75■□□□□ 0.59
PPFIA3-206ENST00000602655 CFAP44Q96MT7 982 aa18.75■□□□□ 0.59
PPFIA3-206ENST00000602655 AIMP1Q12904 312 aaKnown RBP18.75■□□□□ 0.59
PPFIA3-206ENST00000602655 G2E3Q7L622 706 aa18.75■□□□□ 0.59
PPFIA3-206ENST00000602655 TMEM51Q9NW97 253 aa18.75■□□□□ 0.59
PPFIA3-206ENST00000602655 PTMSP20962 102 aa18.74■□□□□ 0.59
PPFIA3-206ENST00000602655 CCDC27Q2M243 656 aa18.74■□□□□ 0.59
PPFIA3-206ENST00000602655 LNPKQ9C0E8 428 aa18.74■□□□□ 0.59
PPFIA3-206ENST00000602655 ZKSCAN5Q9Y2L8 839 aa18.74■□□□□ 0.59
PPFIA3-206ENST00000602655 ADAMTS2O95450 1211 aa18.73■□□□□ 0.59
PPFIA3-206ENST00000602655 IPO8O15397 1037 aaKnown RBP18.73■□□□□ 0.59
PPFIA3-206ENST00000602655 FKBP5Q13451 457 aaPredicted RBP18.73■□□□□ 0.59
PPFIA3-206ENST00000602655 DLC1Q96QB1 1528 aa18.73■□□□□ 0.59
PPFIA3-206ENST00000602655 GNAT3A8MTJ3 354 aa18.73■□□□□ 0.59
PPFIA3-206ENST00000602655 MVPQ14764 893 aaKnown RBP18.73■□□□□ 0.59
PPFIA3-206ENST00000602655 C1orf141Q5JVX7 400 aa18.73■□□□□ 0.59
PPFIA3-206ENST00000602655 CADPS2Q86UW7 1296 aa18.73■□□□□ 0.59
PPFIA3-206ENST00000602655 PNPLA6Q8IY17 1366 aa18.73■□□□□ 0.59
PPFIA3-206ENST00000602655 ARHGAP23Q9P227 1491 aa18.72■□□□□ 0.59
PPFIA3-206ENST00000602655 EVA1CP58658 441 aa18.72■□□□□ 0.59
PPFIA3-206ENST00000602655 PHF23Q9BUL5 403 aaPredicted RBP18.72■□□□□ 0.59
PPFIA3-206ENST00000602655 MAP2P11137 1827 aaKnown RBP18.72■□□□□ 0.59
PPFIA3-206ENST00000602655 IL17REQ8NFR9 667 aa18.72■□□□□ 0.59
PPFIA3-206ENST00000602655 PLCB2Q00722 1185 aa18.72■□□□□ 0.59
PPFIA3-206ENST00000602655 RAPGEF4Q8WZA2 1011 aa18.72■□□□□ 0.59
PPFIA3-206ENST00000602655 TOM1L2Q6ZVM7 507 aa18.71■□□□□ 0.59
PPFIA3-206ENST00000602655 ZNF500O60304 480 aaPredicted RBP18.71■□□□□ 0.59
PPFIA3-206ENST00000602655 PDE3AQ14432 1141 aa18.71■□□□□ 0.59
PPFIA3-206ENST00000602655 RBSNQ9H1K0 784 aa18.7■□□□□ 0.58
PPFIA3-206ENST00000602655 SLAIN2Q9P270 581 aa18.7■□□□□ 0.58
PPFIA3-206ENST00000602655 CCDC9Q9Y3X0 531 aaKnown RBP18.7■□□□□ 0.58
PPFIA3-206ENST00000602655 DIP2AQ14689 1571 aa18.7■□□□□ 0.58
PPFIA3-206ENST00000602655 KCNJ4P48050 445 aa18.7■□□□□ 0.58
PPFIA3-206ENST00000602655 GAS2L2Q8NHY3 880 aa18.7■□□□□ 0.58
PPFIA3-206ENST00000602655 IP6K1Q92551 441 aa18.7■□□□□ 0.58
PPFIA3-206ENST00000602655 IFT57Q9NWB7 429 aa18.7■□□□□ 0.58
PPFIA3-206ENST00000602655 KIAA2012Q0VF49 1180 aa18.69■□□□□ 0.58
PPFIA3-206ENST00000602655 FOXD4L5Q5VV16 416 aaPredicted RBP18.69■□□□□ 0.58
PPFIA3-206ENST00000602655 FOXD4L4Q8WXT5 416 aaPredicted RBP18.69■□□□□ 0.58
PPFIA3-206ENST00000602655 CCDC39Q9UFE4 941 aa18.69■□□□□ 0.58
PPFIA3-206ENST00000602655 PRAMEF22A3QJZ6 481 aa18.69■□□□□ 0.58
PPFIA3-206ENST00000602655 KCNH5Q8NCM2 988 aa18.69■□□□□ 0.58
PPFIA3-206ENST00000602655 STK31Q9BXU1 1019 aa18.69■□□□□ 0.58
PPFIA3-206ENST00000602655 MED14O60244 1454 aa18.69■□□□□ 0.58
PPFIA3-206ENST00000602655 SLIT1O75093 1534 aa18.69■□□□□ 0.58
PPFIA3-206ENST00000602655 ATP2B3Q16720 1220 aa18.69■□□□□ 0.58
PPFIA3-206ENST00000602655 ANKRD45Q5TZF3 282 aa18.69■□□□□ 0.58
PPFIA3-206ENST00000602655 SYTL4Q96C24 671 aaPredicted RBP18.69■□□□□ 0.58
PPFIA3-206ENST00000602655 LRRC7Q96NW7 1537 aa18.68■□□□□ 0.58
PPFIA3-206ENST00000602655 RGPD8O14715 1765 aaPredicted RBP18.68■□□□□ 0.58
PPFIA3-206ENST00000602655 PRIM1P49642 420 aaKnown RBP18.68■□□□□ 0.58
PPFIA3-206ENST00000602655 SBNO1A3KN83 1393 aa18.68■□□□□ 0.58
PPFIA3-206ENST00000602655 MSH6P52701 1360 aa18.67■□□□□ 0.58
PPFIA3-206ENST00000602655 PDCL2Q8N4E4 241 aa18.67■□□□□ 0.58
PPFIA3-206ENST00000602655 RBM27Q9P2N5 1060 aaKnown RBP18.67■□□□□ 0.58
PPFIA3-206ENST00000602655 CDC42BPGQ6DT37 1551 aa18.67■□□□□ 0.58
PPFIA3-206ENST00000602655 RAB3GAP1Q15042 981 aa18.66■□□□□ 0.58
PPFIA3-206ENST00000602655 AATKQ6ZMQ8 1374 aa18.66■□□□□ 0.58
PPFIA3-206ENST00000602655 MYL6BP14649 208 aa18.66■□□□□ 0.58
PPFIA3-206ENST00000602655 KLHL40Q2TBA0 621 aa18.66■□□□□ 0.58
PPFIA3-206ENST00000602655 KIF3AQ9Y496 699 aa18.66■□□□□ 0.58
PPFIA3-206ENST00000602655 PRPF40AO75400 957 aaKnown RBP18.65■□□□□ 0.58
PPFIA3-206ENST00000602655 HDGFL1Q5TGJ6 251 aa18.65■□□□□ 0.58
PPFIA3-206ENST00000602655 BRINP3Q76B58 766 aa18.65■□□□□ 0.58
PPFIA3-206ENST00000602655 MRPL50Q8N5N7 158 aaKnown RBP18.65■□□□□ 0.58
PPFIA3-206ENST00000602655 BTBD11A6QL63 1104 aa18.65■□□□□ 0.58
PPFIA3-206ENST00000602655 ZSCAN23Q3MJ62 389 aa18.65■□□□□ 0.58
PPFIA3-206ENST00000602655 PHAXQ9H814 394 aaKnown RBP18.65■□□□□ 0.58
PPFIA3-206ENST00000602655 OVOS2A0A0J9YW53 1432 aa18.65■□□□□ 0.58
PPFIA3-206ENST00000602655 PTCH1Q13635 1447 aa18.65■□□□□ 0.58
PPFIA3-206ENST00000602655 OVOS2Q6IE36 1432 aa18.65■□□□□ 0.58
PPFIA3-206ENST00000602655 CERS3Q8IU89 383 aa18.65■□□□□ 0.58
PPFIA3-206ENST00000602655 DDX19BQ9UMR2 479 aa18.65■□□□□ 0.58
PPFIA3-206ENST00000602655 PTCD1O75127 700 aaKnown RBP18.64■□□□□ 0.57
PPFIA3-206ENST00000602655 HS1BP3Q53T59 392 aa18.64■□□□□ 0.57
PPFIA3-206ENST00000602655 ARHGEF25Q86VW2 580 aa18.64■□□□□ 0.57
PPFIA3-206ENST00000602655 CIZ1Q9ULV3 898 aaPredicted RBP18.64■□□□□ 0.57
PPFIA3-206ENST00000602655 COL3A1P02461 1466 aaPredicted RBP18.64■□□□□ 0.57
PPFIA3-206ENST00000602655 BAG4O95429 457 aaKnown RBP18.64■□□□□ 0.57
PPFIA3-206ENST00000602655 TRERF1Q96PN7 1200 aa18.64■□□□□ 0.57
PPFIA3-206ENST00000602655 ADGRL3Q9HAR2 1447 aa18.63■□□□□ 0.57
PPFIA3-206ENST00000602655 KIF16BQ96L93 1317 aa18.63■□□□□ 0.57
PPFIA3-206ENST00000602655 U2AF2P26368 475 aaKnown RBP eCLIP18.63■□□□□ 0.57
PPFIA3-206ENST00000602655 PLEKHO1Q53GL0 409 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms