RNA–Protein interactions for RNA: ENST00000602509.5

PPFIA3-205, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-205ENST00000602509 KLHL34Q8N239 644 aa35.44■■■■□ 3.26
PPFIA3-205ENST00000602509 RBM42Q9BTD8 480 aaKnown RBP35.44■■■■□ 3.26
PPFIA3-205ENST00000602509 ITPK1Q13572 414 aa35.43■■■■□ 3.26
PPFIA3-205ENST00000602509 AKAP4Q5JQC9 854 aa35.43■■■■□ 3.26
PPFIA3-205ENST00000602509 PHF14O94880 888 aa35.42■■■■□ 3.26
PPFIA3-205ENST00000602509 C4BP0C0L5 1744 aa35.42■■■■□ 3.26
PPFIA3-205ENST00000602509 MAP3K5Q99683 1374 aa35.41■■■■□ 3.26
PPFIA3-205ENST00000602509 MSL1Q68DK7 614 aa35.41■■■■□ 3.26
PPFIA3-205ENST00000602509 U2SURPO15042 1029 aaKnown RBP35.4■■■■□ 3.26
PPFIA3-205ENST00000602509 NFATC2IPQ8NCF5 419 aa35.4■■■■□ 3.26
PPFIA3-205ENST00000602509 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.39■■■■□ 3.26
PPFIA3-205ENST00000602509 TAF1LQ8IZX4 1826 aa35.39■■■■□ 3.26
PPFIA3-205ENST00000602509 CFAP53Q96M91 514 aa35.38■■■■□ 3.25
PPFIA3-205ENST00000602509 GNPATO15228 680 aa35.37■■■■□ 3.25
PPFIA3-205ENST00000602509 SSFA2P28290 1259 aa35.37■■■■□ 3.25
PPFIA3-205ENST00000602509 AMIGO3Q86WK7 504 aa35.36■■■■□ 3.25
PPFIA3-205ENST00000602509 SMIM5Q71RC9 77 aa35.35■■■■□ 3.25
PPFIA3-205ENST00000602509 MTHFSDQ2M296 383 aaKnown RBP35.34■■■■□ 3.25
PPFIA3-205ENST00000602509 YY1P25490 414 aa35.33■■■■□ 3.25
PPFIA3-205ENST00000602509 SLC4A9Q96Q91 983 aa35.33■■■■□ 3.25
PPFIA3-205ENST00000602509 COL3A1P02461 1466 aaPredicted RBP35.33■■■■□ 3.25
PPFIA3-205ENST00000602509 PTCD1O75127 700 aaKnown RBP35.32■■■■□ 3.24
PPFIA3-205ENST00000602509 LGR6Q9HBX8 967 aa35.31■■■■□ 3.24
PPFIA3-205ENST00000602509 COL24A1Q17RW2 1714 aa35.31■■■■□ 3.24
PPFIA3-205ENST00000602509 SLC52A2Q9HAB3 445 aa35.3■■■■□ 3.24
PPFIA3-205ENST00000602509 RNMTO43148 476 aaKnown RBP35.29■■■■□ 3.24
PPFIA3-205ENST00000602509 RTCBQ9Y3I0 505 aaKnown RBP35.29■■■■□ 3.24
PPFIA3-205ENST00000602509 PPP2R1AP30153 589 aa35.28■■■■□ 3.24
PPFIA3-205ENST00000602509 NUDCQ9Y266 331 aa35.28■■■■□ 3.24
PPFIA3-205ENST00000602509 RC3H1Q5TC82 1133 aaKnown RBP35.27■■■■□ 3.24
PPFIA3-205ENST00000602509 GPR162Q16538 588 aa35.25■■■■□ 3.23
PPFIA3-205ENST00000602509 TRAPPC3LQ5T215 181 aa35.25■■■■□ 3.23
PPFIA3-205ENST00000602509 UBR3Q6ZT12 1888 aa35.24■■■■□ 3.23
PPFIA3-205ENST00000602509 GAS2L2Q8NHY3 880 aa35.24■■■■□ 3.23
PPFIA3-205ENST00000602509 CNTNAP4Q9C0A0 1308 aa35.24■■■■□ 3.23
PPFIA3-205ENST00000602509 NLGN2Q8NFZ4 835 aa35.23■■■■□ 3.23
PPFIA3-205ENST00000602509 PELP1Q8IZL8 1130 aaKnown RBP35.22■■■■□ 3.23
PPFIA3-205ENST00000602509 ZNF831Q5JPB2 1677 aa35.21■■■■□ 3.23
PPFIA3-205ENST00000602509 ADRA2BP18089 450 aa35.2■■■■□ 3.23
PPFIA3-205ENST00000602509 SCN11AQ9UI33 1791 aa35.2■■■■□ 3.23
PPFIA3-205ENST00000602509 RPS6KA4O75676 772 aa35.19■■■■□ 3.22
PPFIA3-205ENST00000602509 CD2APQ9Y5K6 639 aa35.19■■■■□ 3.22
PPFIA3-205ENST00000602509 GNAT3A8MTJ3 354 aa35.18■■■■□ 3.22
PPFIA3-205ENST00000602509 U2AF1L5P0DN76 240 aaPredicted RBP35.18■■■■□ 3.22
PPFIA3-205ENST00000602509 U2AF1Q01081 240 aaKnown RBP eCLIP35.18■■■■□ 3.22
PPFIA3-205ENST00000602509 UTRNP46939 3433 aa35.18■■■■□ 3.22
PPFIA3-205ENST00000602509 PRKAR2BP31323 418 aa35.17■■■■□ 3.22
PPFIA3-205ENST00000602509 RFC4P35249 363 aa35.17■■■■□ 3.22
PPFIA3-205ENST00000602509 CRKLP46109 303 aaKnown RBP35.17■■■■□ 3.22
PPFIA3-205ENST00000602509 SLC39A6Q13433 755 aa35.17■■■■□ 3.22
PPFIA3-205ENST00000602509 ARHGEF1Q92888 912 aaKnown RBP35.17■■■■□ 3.22
PPFIA3-205ENST00000602509 MRC1P22897 1456 aa35.16■■■■□ 3.22
PPFIA3-205ENST00000602509 RSPH6AQ9H0K4 717 aa35.16■■■■□ 3.22
PPFIA3-205ENST00000602509 TEFQ10587 303 aa35.13■■■■□ 3.21
PPFIA3-205ENST00000602509 NLGN1Q8N2Q7 840 aa35.13■■■■□ 3.21
PPFIA3-205ENST00000602509 PHACTR3Q96KR7 559 aa35.12■■■■□ 3.21
PPFIA3-205ENST00000602509 GOLGB1Q14789 3259 aaKnown RBP35.12■■■■□ 3.21
PPFIA3-205ENST00000602509 MMP10P09238 476 aa35.11■■■■□ 3.21
PPFIA3-205ENST00000602509 DNAJC10Q8IXB1 793 aa35.11■■■■□ 3.21
PPFIA3-205ENST00000602509 COL5A3P25940 1745 aaPredicted RBP35.1■■■■□ 3.21
PPFIA3-205ENST00000602509 TTC5Q8N0Z6 440 aa35.1■■■■□ 3.21
PPFIA3-205ENST00000602509 IL17REQ8NFR9 667 aa35.1■■■■□ 3.21
PPFIA3-205ENST00000602509 FCHSD2O94868 740 aa35.09■■■■□ 3.21
PPFIA3-205ENST00000602509 INTS5Q6P9B9 1019 aaKnown RBP35.07■■■■□ 3.2
PPFIA3-205ENST00000602509 CCDC87Q9NVE4 849 aa35.07■■■■□ 3.2
PPFIA3-205ENST00000602509 ADAMTS7Q9UKP4 1686 aa35.07■■■■□ 3.2
PPFIA3-205ENST00000602509 GYS1P13807 737 aa35.06■■■■□ 3.2
PPFIA3-205ENST00000602509 VSIG10Q8N0Z9 540 aa35.06■■■■□ 3.2
PPFIA3-205ENST00000602509 GRIN3BO60391 1043 aa35.04■■■■□ 3.2
PPFIA3-205ENST00000602509 CYP19A1P11511 503 aaPredicted RBP35.04■■■■□ 3.2
PPFIA3-205ENST00000602509 KCPQ6ZWJ8 1503 aa35.02■■■■□ 3.2
PPFIA3-205ENST00000602509 YBX3P16989 372 aaKnown RBP eCLIP35.02■■■■□ 3.2
PPFIA3-205ENST00000602509 TJP1Q07157 1748 aa35.02■■■■□ 3.2
PPFIA3-205ENST00000602509 RTF1Q92541 710 aaKnown RBP35.02■■■■□ 3.2
PPFIA3-205ENST00000602509 CICQ96RK0 1608 aaPredicted RBP35■■■■□ 3.19
PPFIA3-205ENST00000602509 ZNF790Q6PG37 636 aa35■■■■□ 3.19
PPFIA3-205ENST00000602509 SRP68Q9UHB9 627 aaKnown RBP35■■■■□ 3.19
PPFIA3-205ENST00000602509 PARP3Q9Y6F1 533 aa35■■■■□ 3.19
PPFIA3-205ENST00000602509 MYH14Q7Z406 1995 aaKnown RBP35■■■■□ 3.19
PPFIA3-205ENST00000602509 NEFMP07197 916 aa34.99■■■■□ 3.19
PPFIA3-205ENST00000602509 USP42Q9H9J4 1324 aaKnown RBP34.99■■■■□ 3.19
PPFIA3-205ENST00000602509 CEMIPQ8WUJ3 1361 aa34.99■■■■□ 3.19
PPFIA3-205ENST00000602509 STARD3NLO95772 234 aa34.98■■■■□ 3.19
PPFIA3-205ENST00000602509 ZPR1O75312 459 aa34.97■■■■□ 3.19
PPFIA3-205ENST00000602509 DDX10Q13206 875 aaKnown RBP34.97■■■■□ 3.19
PPFIA3-205ENST00000602509 SOS1Q07889 1333 aaPredicted RBP34.97■■■■□ 3.19
PPFIA3-205ENST00000602509 ZNF496Q96IT1 587 aaPredicted RBP34.96■■■■□ 3.19
PPFIA3-205ENST00000602509 VIRMAQ69YN4 1812 aaKnown RBP34.95■■■■□ 3.19
PPFIA3-205ENST00000602509 BTBD11A6QL63 1104 aa34.95■■■■□ 3.19
PPFIA3-205ENST00000602509 RALBP1Q15311 655 aa34.95■■■■□ 3.19
PPFIA3-205ENST00000602509 ZBTB1Q9Y2K1 713 aa34.95■■■■□ 3.19
PPFIA3-205ENST00000602509 FKBP8Q14318 412 aa34.94■■■■□ 3.18
PPFIA3-205ENST00000602509 TEX13AQ9BXU3 409 aaPredicted RBP34.94■■■■□ 3.18
PPFIA3-205ENST00000602509 MCM10Q7L590 875 aa34.93■■■■□ 3.18
PPFIA3-205ENST00000602509 ZNF784Q8NCA9 323 aaPredicted RBP34.93■■■■□ 3.18
PPFIA3-205ENST00000602509 FMNL2Q96PY5 1086 aa34.93■■■■□ 3.18
PPFIA3-205ENST00000602509 HEG1Q9ULI3 1381 aa34.92■■■■□ 3.18
PPFIA3-205ENST00000602509 HTATSF1O43719 755 aaKnown RBP34.91■■■■□ 3.18
PPFIA3-205ENST00000602509 CANXP27824 592 aaKnown RBP34.91■■■■□ 3.18
PPFIA3-205ENST00000602509 USPL1Q5W0Q7 1092 aa34.91■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms