RNA–Protein interactions for RNA: ENST00000601549.1

KCNN4-208, Transcript of potassium calcium-activated channel subfamily N member 4, humanhuman

TSL 3

Gene KCNN4, Length 1,093 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4-208ENST00000601549 ZNF428Q96B54 188 aa23.52■■□□□ 1.36
KCNN4-208ENST00000601549 CHMP4AQ9BY43 222 aa23.52■■□□□ 1.36
KCNN4-208ENST00000601549 SLC52A2Q9HAB3 445 aa23.52■■□□□ 1.36
KCNN4-208ENST00000601549 SHANK3Q9BYB0 1731 aa23.52■■□□□ 1.36
KCNN4-208ENST00000601549 THUMPD2Q9BTF0 503 aaKnown RBP23.51■■□□□ 1.35
KCNN4-208ENST00000601549 LGR6Q9HBX8 967 aa23.51■■□□□ 1.35
KCNN4-208ENST00000601549 FANCIQ9NVI1 1328 aa23.51■■□□□ 1.35
KCNN4-208ENST00000601549 SPINK5Q9NQ38 1064 aaPredicted RBP23.5■■□□□ 1.35
KCNN4-208ENST00000601549 SCN11AQ9UI33 1791 aa23.5■■□□□ 1.35
KCNN4-208ENST00000601549 CABP4P57796 275 aa23.48■■□□□ 1.35
KCNN4-208ENST00000601549 MBIPQ9NS73 344 aa23.48■■□□□ 1.35
KCNN4-208ENST00000601549 TSPYL4Q9UJ04 414 aa23.48■■□□□ 1.35
KCNN4-208ENST00000601549 BTBD11A6QL63 1104 aa23.46■■□□□ 1.35
KCNN4-208ENST00000601549 BRWD3Q6RI45 1802 aa23.46■■□□□ 1.35
KCNN4-208ENST00000601549 MARCH10Q8NA82 808 aaPredicted RBP23.46■■□□□ 1.35
KCNN4-208ENST00000601549 LAS1LQ9Y4W2 734 aaKnown RBP23.46■■□□□ 1.35
KCNN4-208ENST00000601549 HOXB7P09629 217 aa23.44■■□□□ 1.34
KCNN4-208ENST00000601549 NFATC2IPQ8NCF5 419 aa23.43■■□□□ 1.34
KCNN4-208ENST00000601549 TMOD3Q9NYL9 352 aa23.43■■□□□ 1.34
KCNN4-208ENST00000601549 TSR2Q969E8 191 aaKnown RBP23.42■■□□□ 1.34
KCNN4-208ENST00000601549 SIPA1L3O60292 1781 aaPredicted RBP23.42■■□□□ 1.34
KCNN4-208ENST00000601549 FAM196AQ6ZSG2 479 aa23.41■■□□□ 1.34
KCNN4-208ENST00000601549 EXOSC9Q06265 439 aaKnown RBP23.4■■□□□ 1.34
KCNN4-208ENST00000601549 ZNF790Q6PG37 636 aa23.4■■□□□ 1.34
KCNN4-208ENST00000601549 TTC5Q8N0Z6 440 aa23.4■■□□□ 1.34
KCNN4-208ENST00000601549 RCAN3Q9UKA8 241 aa23.39■■□□□ 1.33
KCNN4-208ENST00000601549 VIRMAQ69YN4 1812 aaKnown RBP23.38■■□□□ 1.33
KCNN4-208ENST00000601549 KDM3BQ7LBC6 1761 aa23.37■■□□□ 1.33
KCNN4-208ENST00000601549 EIF4A1P60842 406 aaKnown RBP23.37■■□□□ 1.33
KCNN4-208ENST00000601549 ALDH1L2Q3SY69 923 aa23.37■■□□□ 1.33
KCNN4-208ENST00000601549 CCDC125Q86Z20 511 aa23.37■■□□□ 1.33
KCNN4-208ENST00000601549 HEG1Q9ULI3 1381 aa23.37■■□□□ 1.33
KCNN4-208ENST00000601549 TWISTNBQ3B726 338 aaPredicted RBP23.36■■□□□ 1.33
KCNN4-208ENST00000601549 SMARCC1Q92922 1105 aaPredicted RBP23.35■■□□□ 1.33
KCNN4-208ENST00000601549 FMNL2Q96PY5 1086 aa23.35■■□□□ 1.33
KCNN4-208ENST00000601549 TOGARAM1Q9Y4F4 1720 aa23.34■■□□□ 1.33
KCNN4-208ENST00000601549 VAMP4O75379 141 aa23.34■■□□□ 1.33
KCNN4-208ENST00000601549 FAM182BQ5T319 152 aa23.34■■□□□ 1.33
KCNN4-208ENST00000601549 VSIG10Q8N0Z9 540 aa23.34■■□□□ 1.33
KCNN4-208ENST00000601549 PIGBQ92521 554 aa23.34■■□□□ 1.33
KCNN4-208ENST00000601549 MIS18AQ9NYP9 233 aa23.34■■□□□ 1.33
KCNN4-208ENST00000601549 HMGB2P26583 209 aaKnown RBP23.33■■□□□ 1.33
KCNN4-208ENST00000601549 PRIM1P49642 420 aaKnown RBP23.33■■□□□ 1.33
KCNN4-208ENST00000601549 BRPF1P55201 1214 aaPredicted RBP23.33■■□□□ 1.33
KCNN4-208ENST00000601549 SF3B2Q13435 895 aaKnown RBP23.33■■□□□ 1.33
KCNN4-208ENST00000601549 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.32■■□□□ 1.32
KCNN4-208ENST00000601549 C8orf58Q8NAV2 365 aa23.32■■□□□ 1.32
KCNN4-208ENST00000601549 TEX13AQ9BXU3 409 aaPredicted RBP23.32■■□□□ 1.32
KCNN4-208ENST00000601549 PAPPAQ13219 1627 aa23.32■■□□□ 1.32
KCNN4-208ENST00000601549 SNRPA1P09661 255 aaKnown RBP23.31■■□□□ 1.32
KCNN4-208ENST00000601549 RARSP54136 660 aaKnown RBP23.31■■□□□ 1.32
KCNN4-208ENST00000601549 DOT1LQ8TEK3 1739 aa23.3■■□□□ 1.32
KCNN4-208ENST00000601549 GIGYF1O75420 1035 aaPredicted RBP23.29■■□□□ 1.32
KCNN4-208ENST00000601549 CCDC30Q5VVM6 783 aa23.29■■□□□ 1.32
KCNN4-208ENST00000601549 SYTL4Q96C24 671 aaPredicted RBP23.29■■□□□ 1.32
KCNN4-208ENST00000601549 RNF123Q5XPI4 1314 aa23.29■■□□□ 1.32
KCNN4-208ENST00000601549 BCL11BQ9C0K0 894 aaPredicted RBP23.28■■□□□ 1.32
KCNN4-208ENST00000601549 ATG3Q9NT62 314 aa23.28■■□□□ 1.32
KCNN4-208ENST00000601549 ITGB4P16144 1822 aa23.28■■□□□ 1.32
KCNN4-208ENST00000601549 SLC39A6Q13433 755 aa23.27■■□□□ 1.32
KCNN4-208ENST00000601549 TSPYL6Q8N831 410 aa23.27■■□□□ 1.32
KCNN4-208ENST00000601549 ZNF496Q96IT1 587 aaPredicted RBP23.27■■□□□ 1.32
KCNN4-208ENST00000601549 NHSQ6T4R5 1651 aa23.27■■□□□ 1.32
KCNN4-208ENST00000601549 ERBB4Q15303 1308 aa23.27■■□□□ 1.32
KCNN4-208ENST00000601549 KIF16BQ96L93 1317 aa23.27■■□□□ 1.32
KCNN4-208ENST00000601549 UBR2Q8IWV8 1755 aa23.27■■□□□ 1.32
KCNN4-208ENST00000601549 TRIM37O94972 964 aa23.26■■□□□ 1.31
KCNN4-208ENST00000601549 IFFO2Q5TF58 517 aa23.26■■□□□ 1.31
KCNN4-208ENST00000601549 STK31Q9BXU1 1019 aa23.26■■□□□ 1.31
KCNN4-208ENST00000601549 EP400Q96L91 3159 aa23.26■■□□□ 1.31
KCNN4-208ENST00000601549 KCPQ6ZWJ8 1503 aa23.25■■□□□ 1.31
KCNN4-208ENST00000601549 KCNQ3O43525 872 aa23.25■■□□□ 1.31
KCNN4-208ENST00000601549 IPO8O15397 1037 aaKnown RBP23.24■■□□□ 1.31
KCNN4-208ENST00000601549 MS4A1P11836 297 aa23.24■■□□□ 1.31
KCNN4-208ENST00000601549 HDGFL1Q5TGJ6 251 aa23.24■■□□□ 1.31
KCNN4-208ENST00000601549 ACSBG1Q96GR2 724 aa23.24■■□□□ 1.31
KCNN4-208ENST00000601549 ASAP1Q9ULH1 1129 aa23.24■■□□□ 1.31
KCNN4-208ENST00000601549 ELL2O00472 640 aaPredicted RBP23.23■■□□□ 1.31
KCNN4-208ENST00000601549 SSH1Q8WYL5 1049 aa23.23■■□□□ 1.31
KCNN4-208ENST00000601549 ARHGAP45Q92619 1136 aa23.23■■□□□ 1.31
KCNN4-208ENST00000601549 SMC4Q9NTJ3 1288 aa23.23■■□□□ 1.31
KCNN4-208ENST00000601549 BAG6P46379 1132 aa23.22■■□□□ 1.31
KCNN4-208ENST00000601549 KRT24Q2M2I5 525 aa23.21■■□□□ 1.31
KCNN4-208ENST00000601549 DBF4Q9UBU7 674 aaPredicted RBP23.21■■□□□ 1.31
KCNN4-208ENST00000601549 ZNF831Q5JPB2 1677 aa23.21■■□□□ 1.31
KCNN4-208ENST00000601549 CICQ96RK0 1608 aaPredicted RBP23.2■■□□□ 1.3
KCNN4-208ENST00000601549 PALLDQ8WX93 1383 aa23.2■■□□□ 1.3
KCNN4-208ENST00000601549 KCNQ2O43526 872 aa23.2■■□□□ 1.3
KCNN4-208ENST00000601549 STARD3NLO95772 234 aa23.2■■□□□ 1.3
KCNN4-208ENST00000601549 RRP1P56182 461 aaKnown RBP23.2■■□□□ 1.3
KCNN4-208ENST00000601549 SUPT16HQ9Y5B9 1047 aaKnown RBP23.2■■□□□ 1.3
KCNN4-208ENST00000601549 PTPRCP08575 1304 aa23.19■■□□□ 1.3
KCNN4-208ENST00000601549 MRPL50Q8N5N7 158 aaKnown RBP23.19■■□□□ 1.3
KCNN4-208ENST00000601549 SBF2Q86WG5 1849 aa23.19■■□□□ 1.3
KCNN4-208ENST00000601549 PTCD1O75127 700 aaKnown RBP23.18■■□□□ 1.3
KCNN4-208ENST00000601549 APBA3O96018 575 aa23.18■■□□□ 1.3
KCNN4-208ENST00000601549 HYPKQ9NX55 129 aa23.18■■□□□ 1.3
KCNN4-208ENST00000601549 TNS1Q9HBL0 1735 aaKnown RBP23.18■■□□□ 1.3
KCNN4-208ENST00000601549 LOC102724428A0A0B4J2F2 783 aa23.17■■□□□ 1.3
KCNN4-208ENST00000601549 SIK1P57059 783 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms