RNA–Protein interactions for RNA: ENST00000601545.5

SNRPA-211, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 5

Gene SNRPA, Length 695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-211ENST00000601545 KLHL34Q8N239 644 aa28.4■■■□□ 2.14
SNRPA-211ENST00000601545 FLAD1Q8NFF5 587 aa28.4■■■□□ 2.14
SNRPA-211ENST00000601545 KDM6AO15550 1401 aaPredicted RBP28.4■■■□□ 2.14
SNRPA-211ENST00000601545 AKAP4Q5JQC9 854 aa28.39■■■□□ 2.14
SNRPA-211ENST00000601545 PHF14O94880 888 aa28.38■■■□□ 2.13
SNRPA-211ENST00000601545 MSL1Q68DK7 614 aa28.38■■■□□ 2.13
SNRPA-211ENST00000601545 MTHFSDQ2M296 383 aaKnown RBP28.37■■■□□ 2.13
SNRPA-211ENST00000601545 AMIGO3Q86WK7 504 aa28.37■■■□□ 2.13
SNRPA-211ENST00000601545 CFAP53Q96M91 514 aa28.37■■■□□ 2.13
SNRPA-211ENST00000601545 LGR6Q9HBX8 967 aa28.37■■■□□ 2.13
SNRPA-211ENST00000601545 SLC4A9Q96Q91 983 aa28.35■■■□□ 2.13
SNRPA-211ENST00000601545 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.34■■■□□ 2.13
SNRPA-211ENST00000601545 PPP2R1AP30153 589 aa28.34■■■□□ 2.13
SNRPA-211ENST00000601545 C5P01031 1676 aa28.33■■■□□ 2.13
SNRPA-211ENST00000601545 GNPATO15228 680 aa28.33■■■□□ 2.13
SNRPA-211ENST00000601545 PTCD1O75127 700 aaKnown RBP28.33■■■□□ 2.13
SNRPA-211ENST00000601545 QSER1Q2KHR3 1735 aa28.32■■■□□ 2.12
SNRPA-211ENST00000601545 RNMTO43148 476 aaKnown RBP28.32■■■□□ 2.12
SNRPA-211ENST00000601545 TUBGCP6Q96RT7 1819 aa28.32■■■□□ 2.12
SNRPA-211ENST00000601545 C4BP0C0L5 1744 aa28.3■■■□□ 2.12
SNRPA-211ENST00000601545 COL3A1P02461 1466 aaPredicted RBP28.3■■■□□ 2.12
SNRPA-211ENST00000601545 SSFA2P28290 1259 aa28.29■■■□□ 2.12
SNRPA-211ENST00000601545 SLC52A2Q9HAB3 445 aa28.29■■■□□ 2.12
SNRPA-211ENST00000601545 NUDCQ9Y266 331 aa28.29■■■□□ 2.12
SNRPA-211ENST00000601545 TAF1LQ8IZX4 1826 aa28.28■■■□□ 2.12
SNRPA-211ENST00000601545 RTCBQ9Y3I0 505 aaKnown RBP28.26■■■□□ 2.11
SNRPA-211ENST00000601545 U2AF1L5P0DN76 240 aaPredicted RBP28.24■■■□□ 2.11
SNRPA-211ENST00000601545 U2AF1Q01081 240 aaKnown RBP eCLIP28.24■■■□□ 2.11
SNRPA-211ENST00000601545 SLC39A6Q13433 755 aa28.24■■■□□ 2.11
SNRPA-211ENST00000601545 TRAPPC3LQ5T215 181 aa28.24■■■□□ 2.11
SNRPA-211ENST00000601545 RC3H1Q5TC82 1133 aaKnown RBP28.24■■■□□ 2.11
SNRPA-211ENST00000601545 MAP3K5Q99683 1374 aa28.24■■■□□ 2.11
SNRPA-211ENST00000601545 PRKAR2BP31323 418 aa28.23■■■□□ 2.11
SNRPA-211ENST00000601545 GAS2L2Q8NHY3 880 aa28.23■■■□□ 2.11
SNRPA-211ENST00000601545 YY1P25490 414 aa28.22■■■□□ 2.11
SNRPA-211ENST00000601545 NLGN2Q8NFZ4 835 aa28.22■■■□□ 2.11
SNRPA-211ENST00000601545 PHACTR3Q96KR7 559 aa28.22■■■□□ 2.11
SNRPA-211ENST00000601545 GNAT3A8MTJ3 354 aa28.21■■■□□ 2.11
SNRPA-211ENST00000601545 PELP1Q8IZL8 1130 aaKnown RBP28.21■■■□□ 2.11
SNRPA-211ENST00000601545 RSPH6AQ9H0K4 717 aa28.21■■■□□ 2.11
SNRPA-211ENST00000601545 RPS6KA4O75676 772 aa28.2■■■□□ 2.1
SNRPA-211ENST00000601545 GPR162Q16538 588 aa28.2■■■□□ 2.1
SNRPA-211ENST00000601545 ARHGEF1Q92888 912 aaKnown RBP28.19■■■□□ 2.1
SNRPA-211ENST00000601545 CNTNAP4Q9C0A0 1308 aa28.18■■■□□ 2.1
SNRPA-211ENST00000601545 CRKLP46109 303 aaKnown RBP28.18■■■□□ 2.1
SNRPA-211ENST00000601545 DDX10Q13206 875 aaKnown RBP28.18■■■□□ 2.1
SNRPA-211ENST00000601545 IL17REQ8NFR9 667 aa28.18■■■□□ 2.1
SNRPA-211ENST00000601545 DNAJC10Q8IXB1 793 aa28.17■■■□□ 2.1
SNRPA-211ENST00000601545 COL24A1Q17RW2 1714 aa28.16■■■□□ 2.1
SNRPA-211ENST00000601545 RFC4P35249 363 aa28.16■■■□□ 2.1
SNRPA-211ENST00000601545 TEFQ10587 303 aa28.16■■■□□ 2.1
SNRPA-211ENST00000601545 UBR3Q6ZT12 1888 aa28.16■■■□□ 2.1
SNRPA-211ENST00000601545 SCN11AQ9UI33 1791 aa28.16■■■□□ 2.1
SNRPA-211ENST00000601545 FCHSD2O94868 740 aa28.15■■■□□ 2.1
SNRPA-211ENST00000601545 ADRA2BP18089 450 aa28.14■■■□□ 2.1
SNRPA-211ENST00000601545 CD2APQ9Y5K6 639 aa28.14■■■□□ 2.1
SNRPA-211ENST00000601545 INTS5Q6P9B9 1019 aaKnown RBP28.12■■■□□ 2.09
SNRPA-211ENST00000601545 TTC5Q8N0Z6 440 aa28.12■■■□□ 2.09
SNRPA-211ENST00000601545 MMP10P09238 476 aa28.11■■■□□ 2.09
SNRPA-211ENST00000601545 NLGN1Q8N2Q7 840 aa28.11■■■□□ 2.09
SNRPA-211ENST00000601545 CYP19A1P11511 503 aaPredicted RBP28.09■■■□□ 2.09
SNRPA-211ENST00000601545 CCDC87Q9NVE4 849 aa28.09■■■□□ 2.09
SNRPA-211ENST00000601545 MRC1P22897 1456 aa28.08■■■□□ 2.09
SNRPA-211ENST00000601545 ZNF831Q5JPB2 1677 aa28.08■■■□□ 2.09
SNRPA-211ENST00000601545 GYS1P13807 737 aa28.08■■■□□ 2.09
SNRPA-211ENST00000601545 RTF1Q92541 710 aaKnown RBP28.07■■■□□ 2.08
SNRPA-211ENST00000601545 SRP68Q9UHB9 627 aaKnown RBP28.07■■■□□ 2.08
SNRPA-211ENST00000601545 ZNF790Q6PG37 636 aa28.06■■■□□ 2.08
SNRPA-211ENST00000601545 VSIG10Q8N0Z9 540 aa28.06■■■□□ 2.08
SNRPA-211ENST00000601545 RALBP1Q15311 655 aa28.05■■■□□ 2.08
SNRPA-211ENST00000601545 MCM10Q7L590 875 aa28.05■■■□□ 2.08
SNRPA-211ENST00000601545 ZNF496Q96IT1 587 aaPredicted RBP28.05■■■□□ 2.08
SNRPA-211ENST00000601545 BTBD11A6QL63 1104 aa28.04■■■□□ 2.08
SNRPA-211ENST00000601545 NEFMP07197 916 aa28.04■■■□□ 2.08
SNRPA-211ENST00000601545 COL5A3P25940 1745 aaPredicted RBP28.04■■■□□ 2.08
SNRPA-211ENST00000601545 MYH14Q7Z406 1995 aaKnown RBP28.03■■■□□ 2.08
SNRPA-211ENST00000601545 YBX3P16989 372 aaKnown RBP eCLIP28.03■■■□□ 2.08
SNRPA-211ENST00000601545 DCTN1Q14203 1278 aa28.03■■■□□ 2.08
SNRPA-211ENST00000601545 WWC3Q9ULE0 1092 aa28.03■■■□□ 2.08
SNRPA-211ENST00000601545 CEMIPQ8WUJ3 1361 aa28.02■■■□□ 2.08
SNRPA-211ENST00000601545 KCNQ3O43525 872 aa28.02■■■□□ 2.08
SNRPA-211ENST00000601545 ZBTB1Q9Y2K1 713 aa28.02■■■□□ 2.08
SNRPA-211ENST00000601545 ADAMTS7Q9UKP4 1686 aa28.02■■■□□ 2.08
SNRPA-211ENST00000601545 KCPQ6ZWJ8 1503 aa28.02■■■□□ 2.08
SNRPA-211ENST00000601545 ZPR1O75312 459 aa28.01■■■□□ 2.07
SNRPA-211ENST00000601545 STARD3NLO95772 234 aa28.01■■■□□ 2.07
SNRPA-211ENST00000601545 CANXP27824 592 aaKnown RBP28.01■■■□□ 2.07
SNRPA-211ENST00000601545 FKBP8Q14318 412 aa28.01■■■□□ 2.07
SNRPA-211ENST00000601545 PARP3Q9Y6F1 533 aa28.01■■■□□ 2.07
SNRPA-211ENST00000601545 TJP1Q07157 1748 aa28.01■■■□□ 2.07
SNRPA-211ENST00000601545 SOS1Q07889 1333 aaPredicted RBP28■■■□□ 2.07
SNRPA-211ENST00000601545 USP42Q9H9J4 1324 aaKnown RBP28■■■□□ 2.07
SNRPA-211ENST00000601545 GRIN3BO60391 1043 aa28■■■□□ 2.07
SNRPA-211ENST00000601545 FMNL2Q96PY5 1086 aa27.99■■■□□ 2.07
SNRPA-211ENST00000601545 UTRNP46939 3433 aa27.99■■■□□ 2.07
SNRPA-211ENST00000601545 HTATSF1O43719 755 aaKnown RBP27.98■■■□□ 2.07
SNRPA-211ENST00000601545 USPL1Q5W0Q7 1092 aa27.98■■■□□ 2.07
SNRPA-211ENST00000601545 TEX13AQ9BXU3 409 aaPredicted RBP27.98■■■□□ 2.07
SNRPA-211ENST00000601545 HEG1Q9ULI3 1381 aa27.98■■■□□ 2.07
SNRPA-211ENST00000601545 VIRMAQ69YN4 1812 aaKnown RBP27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms