RNA–Protein interactions for RNA: ENST00000601471.1

LINC00649-212, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-212ENST00000601471 MAP3K5Q99683 1374 aa12.83□□□□□ -0.36
LINC00649-212ENST00000601471 ATG3Q9NT62 314 aa12.83□□□□□ -0.36
LINC00649-212ENST00000601471 ASAP1Q9ULH1 1129 aa12.83□□□□□ -0.36
LINC00649-212ENST00000601471 KCPQ6ZWJ8 1503 aa12.83□□□□□ -0.36
LINC00649-212ENST00000601471 CEMIPQ8WUJ3 1361 aa12.82□□□□□ -0.36
LINC00649-212ENST00000601471 PRKAR2BP31323 418 aa12.82□□□□□ -0.36
LINC00649-212ENST00000601471 KCNQ4P56696 695 aa12.82□□□□□ -0.36
LINC00649-212ENST00000601471 GAS2L2Q8NHY3 880 aa12.82□□□□□ -0.36
LINC00649-212ENST00000601471 PHACTR3Q96KR7 559 aa12.82□□□□□ -0.36
LINC00649-212ENST00000601471 PDGFDQ9GZP0 370 aaPredicted RBP12.82□□□□□ -0.36
LINC00649-212ENST00000601471 PRKRIP1Q9H875 184 aaPredicted RBP12.82□□□□□ -0.36
LINC00649-212ENST00000601471 LOC102724428A0A0B4J2F2 783 aa12.81□□□□□ -0.36
LINC00649-212ENST00000601471 ZNF316A6NFI3 1004 aaPredicted RBP12.81□□□□□ -0.36
LINC00649-212ENST00000601471 U2AF1L5P0DN76 240 aaPredicted RBP12.81□□□□□ -0.36
LINC00649-212ENST00000601471 HMGB2P26583 209 aaKnown RBP12.81□□□□□ -0.36
LINC00649-212ENST00000601471 SIK1P57059 783 aa12.81□□□□□ -0.36
LINC00649-212ENST00000601471 U2AF1Q01081 240 aaKnown RBP eCLIP12.81□□□□□ -0.36
LINC00649-212ENST00000601471 SLC52A2Q9HAB3 445 aa12.81□□□□□ -0.36
LINC00649-212ENST00000601471 PNPLA7Q6ZV29 1317 aa12.81□□□□□ -0.36
LINC00649-212ENST00000601471 DLG5Q8TDM6 1919 aa12.8□□□□□ -0.36
LINC00649-212ENST00000601471 RNMTO43148 476 aaKnown RBP12.8□□□□□ -0.36
LINC00649-212ENST00000601471 CABP4P57796 275 aa12.8□□□□□ -0.36
LINC00649-212ENST00000601471 NFATC2IPQ8NCF5 419 aa12.8□□□□□ -0.36
LINC00649-212ENST00000601471 SLC4A9Q96Q91 983 aa12.8□□□□□ -0.36
LINC00649-212ENST00000601471 PLEKHF1Q96S99 279 aa12.8□□□□□ -0.36
LINC00649-212ENST00000601471 LGR6Q9HBX8 967 aa12.8□□□□□ -0.36
LINC00649-212ENST00000601471 GNAT3A8MTJ3 354 aa12.79□□□□□ -0.36
LINC00649-212ENST00000601471 ITPK1Q13572 414 aa12.79□□□□□ -0.36
LINC00649-212ENST00000601471 PTGER2P43116 358 aa12.78□□□□□ -0.36
LINC00649-212ENST00000601471 LINC00116Q8NCU8 138 aa12.78□□□□□ -0.36
LINC00649-212ENST00000601471 IL17REQ8NFR9 667 aa12.78□□□□□ -0.36
LINC00649-212ENST00000601471 SGIP1Q9BQI5 828 aa12.78□□□□□ -0.36
LINC00649-212ENST00000601471 MTFR1LQ9H019 292 aa12.77□□□□□ -0.37
LINC00649-212ENST00000601471 SPON1Q9HCB6 807 aa12.77□□□□□ -0.37
LINC00649-212ENST00000601471 MYH14Q7Z406 1995 aaKnown RBP12.77□□□□□ -0.37
LINC00649-212ENST00000601471 C4AP0C0L4 1744 aa12.76□□□□□ -0.37
LINC00649-212ENST00000601471 ATP6V1AP38606 617 aa12.76□□□□□ -0.37
LINC00649-212ENST00000601471 AMIGO3Q86WK7 504 aa12.76□□□□□ -0.37
LINC00649-212ENST00000601471 SLC16A10Q8TF71 515 aa12.76□□□□□ -0.37
LINC00649-212ENST00000601471 TFCP2L1Q9NZI6 479 aa12.76□□□□□ -0.37
LINC00649-212ENST00000601471 CNTNAP4Q9C0A0 1308 aa12.76□□□□□ -0.37
LINC00649-212ENST00000601471 HTATSF1O43719 755 aaKnown RBP12.75□□□□□ -0.37
LINC00649-212ENST00000601471 ZBTB7AO95365 584 aa12.75□□□□□ -0.37
LINC00649-212ENST00000601471 KDM3BQ7LBC6 1761 aa12.74□□□□□ -0.37
LINC00649-212ENST00000601471 SSFA2P28290 1259 aa12.74□□□□□ -0.37
LINC00649-212ENST00000601471 FLAD1Q8NFF5 587 aa12.74□□□□□ -0.37
LINC00649-212ENST00000601471 RC3H1Q5TC82 1133 aaKnown RBP12.73□□□□□ -0.37
LINC00649-212ENST00000601471 COL23A1Q86Y22 540 aaPredicted RBP12.73□□□□□ -0.37
LINC00649-212ENST00000601471 VSIG10Q8N0Z9 540 aa12.73□□□□□ -0.37
LINC00649-212ENST00000601471 AK7Q96M32 723 aa12.73□□□□□ -0.37
LINC00649-212ENST00000601471 PNNQ9H307 717 aaKnown RBP12.73□□□□□ -0.37
LINC00649-212ENST00000601471 PTCD1O75127 700 aaKnown RBP12.72□□□□□ -0.37
LINC00649-212ENST00000601471 TEFQ10587 303 aa12.72□□□□□ -0.37
LINC00649-212ENST00000601471 NFE2L2Q16236 605 aa12.72□□□□□ -0.37
LINC00649-212ENST00000601471 RBM42Q9BTD8 480 aaKnown RBP12.72□□□□□ -0.37
LINC00649-212ENST00000601471 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.71□□□□□ -0.37
LINC00649-212ENST00000601471 SLC39A6Q13433 755 aa12.71□□□□□ -0.37
LINC00649-212ENST00000601471 ZNF790Q6PG37 636 aa12.71□□□□□ -0.37
LINC00649-212ENST00000601471 GNPATO15228 680 aa12.7□□□□□ -0.38
LINC00649-212ENST00000601471 ADRA2BP18089 450 aa12.7□□□□□ -0.38
LINC00649-212ENST00000601471 MCM10Q7L590 875 aa12.7□□□□□ -0.38
LINC00649-212ENST00000601471 ATF5Q9Y2D1 282 aaPredicted RBP12.7□□□□□ -0.38
LINC00649-212ENST00000601471 LAMB4A4D0S4 1761 aa12.7□□□□□ -0.38
LINC00649-212ENST00000601471 HEG1Q9ULI3 1381 aa12.69□□□□□ -0.38
LINC00649-212ENST00000601471 MAPK8IP3Q9UPT6 1336 aa12.69□□□□□ -0.38
LINC00649-212ENST00000601471 NEFMP07197 916 aa12.69□□□□□ -0.38
LINC00649-212ENST00000601471 CYP19A1P11511 503 aaPredicted RBP12.69□□□□□ -0.38
LINC00649-212ENST00000601471 CRKLP46109 303 aaKnown RBP12.69□□□□□ -0.38
LINC00649-212ENST00000601471 INTS5Q6P9B9 1019 aaKnown RBP12.69□□□□□ -0.38
LINC00649-212ENST00000601471 RTF1Q92541 710 aaKnown RBP12.69□□□□□ -0.38
LINC00649-212ENST00000601471 RPS6KA4O75676 772 aa12.68□□□□□ -0.38
LINC00649-212ENST00000601471 DCTN1Q14203 1278 aa12.68□□□□□ -0.38
LINC00649-212ENST00000601471 DNAJC10Q8IXB1 793 aa12.68□□□□□ -0.38
LINC00649-212ENST00000601471 ZNF496Q96IT1 587 aaPredicted RBP12.68□□□□□ -0.38
LINC00649-212ENST00000601471 ADAMTS8Q9UP79 889 aa12.68□□□□□ -0.38
LINC00649-212ENST00000601471 BTBD11A6QL63 1104 aa12.67□□□□□ -0.38
LINC00649-212ENST00000601471 SMIM5Q71RC9 77 aa12.67□□□□□ -0.38
LINC00649-212ENST00000601471 TTC5Q8N0Z6 440 aa12.67□□□□□ -0.38
LINC00649-212ENST00000601471 ARXQ96QS3 562 aa12.67□□□□□ -0.38
LINC00649-212ENST00000601471 RTCBQ9Y3I0 505 aaKnown RBP12.67□□□□□ -0.38
LINC00649-212ENST00000601471 SCN7AQ01118 1682 aa12.67□□□□□ -0.38
LINC00649-212ENST00000601471 SOS1Q07889 1333 aaPredicted RBP12.66□□□□□ -0.38
LINC00649-212ENST00000601471 PHF14O94880 888 aa12.66□□□□□ -0.38
LINC00649-212ENST00000601471 TMPOP42166 694 aaKnown RBP12.66□□□□□ -0.38
LINC00649-212ENST00000601471 WDR43Q15061 677 aaKnown RBP eCLIP12.66□□□□□ -0.38
LINC00649-212ENST00000601471 CCDC184Q52MB2 194 aa12.66□□□□□ -0.38
LINC00649-212ENST00000601471 RUNDC1Q96C34 613 aa12.66□□□□□ -0.38
LINC00649-212ENST00000601471 FMNL2Q96PY5 1086 aa12.66□□□□□ -0.38
LINC00649-212ENST00000601471 CCDC87Q9NVE4 849 aa12.66□□□□□ -0.38
LINC00649-212ENST00000601471 PPP1R1BQ9UD71 204 aaPredicted RBP12.66□□□□□ -0.38
LINC00649-212ENST00000601471 KIF13BQ9NQT8 1826 aa12.66□□□□□ -0.38
LINC00649-212ENST00000601471 KCNQ3O43525 872 aa12.65□□□□□ -0.38
LINC00649-212ENST00000601471 POLD1P28340 1107 aa12.65□□□□□ -0.38
LINC00649-212ENST00000601471 TAF7Q15545 349 aaPredicted RBP12.65□□□□□ -0.38
LINC00649-212ENST00000601471 TRAPPC3LQ5T215 181 aa12.65□□□□□ -0.38
LINC00649-212ENST00000601471 ARHGEF1Q92888 912 aaKnown RBP12.65□□□□□ -0.38
LINC00649-212ENST00000601471 BCORQ6W2J9 1755 aa12.64□□□□□ -0.39
LINC00649-212ENST00000601471 ANP32CO43423 234 aa12.64□□□□□ -0.39
LINC00649-212ENST00000601471 CCDC146Q8IYE0 955 aa12.64□□□□□ -0.39
LINC00649-212ENST00000601471 TEX13AQ9BXU3 409 aaPredicted RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms