RNA–Protein interactions for RNA: ENST00000601253.5

SNRPA-209, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 519 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-209ENST00000601253 ATG3Q9NT62 314 aa18.27■□□□□ 0.52
SNRPA-209ENST00000601253 ASAP1Q9ULH1 1129 aa18.27■□□□□ 0.52
SNRPA-209ENST00000601253 CCDC184Q52MB2 194 aa18.26■□□□□ 0.51
SNRPA-209ENST00000601253 CCNL1Q9UK58 526 aaPredicted RBP18.26■□□□□ 0.51
SNRPA-209ENST00000601253 TEFQ10587 303 aa18.25■□□□□ 0.51
SNRPA-209ENST00000601253 PNISRQ8TF01 805 aaKnown RBP18.25■□□□□ 0.51
SNRPA-209ENST00000601253 LRRC4BQ9NT99 713 aa18.25■□□□□ 0.51
SNRPA-209ENST00000601253 PAPPAQ13219 1627 aa18.23■□□□□ 0.51
SNRPA-209ENST00000601253 LOC102724428A0A0B4J2F2 783 aa18.23■□□□□ 0.51
SNRPA-209ENST00000601253 SIK1P57059 783 aa18.23■□□□□ 0.51
SNRPA-209ENST00000601253 STK32BQ9NY57 414 aa18.23■□□□□ 0.51
SNRPA-209ENST00000601253 TMPOP42166 694 aaKnown RBP18.22■□□□□ 0.51
SNRPA-209ENST00000601253 LMOD3Q0VAK6 560 aa18.22■□□□□ 0.51
SNRPA-209ENST00000601253 CCDC146Q8IYE0 955 aa18.22■□□□□ 0.51
SNRPA-209ENST00000601253 MCM10Q7L590 875 aa18.21■□□□□ 0.51
SNRPA-209ENST00000601253 ANO8Q9HCE9 1232 aaPredicted RBP18.21■□□□□ 0.51
SNRPA-209ENST00000601253 ZNF831Q5JPB2 1677 aa18.2■□□□□ 0.5
SNRPA-209ENST00000601253 RIPK4P57078 832 aa18.2■□□□□ 0.5
SNRPA-209ENST00000601253 R3HDM1Q15032 1099 aaKnown RBP18.2■□□□□ 0.5
SNRPA-209ENST00000601253 SLC15A2Q16348 729 aa18.2■□□□□ 0.5
SNRPA-209ENST00000601253 DIEXFQ68CQ4 756 aaKnown RBP18.2■□□□□ 0.5
SNRPA-209ENST00000601253 VIRMAQ69YN4 1812 aaKnown RBP18.19■□□□□ 0.5
SNRPA-209ENST00000601253 KCNQ4P56696 695 aa18.19■□□□□ 0.5
SNRPA-209ENST00000601253 AKT1S1Q96B36 256 aa18.19■□□□□ 0.5
SNRPA-209ENST00000601253 ATP6V1AP38606 617 aa18.18■□□□□ 0.5
SNRPA-209ENST00000601253 DCTN1Q14203 1278 aa18.18■□□□□ 0.5
SNRPA-209ENST00000601253 TTC5Q8N0Z6 440 aa18.18■□□□□ 0.5
SNRPA-209ENST00000601253 RBM42Q9BTD8 480 aaKnown RBP18.18■□□□□ 0.5
SNRPA-209ENST00000601253 SIPA1L3O60292 1781 aaPredicted RBP18.17■□□□□ 0.5
SNRPA-209ENST00000601253 PSDA5PKW4 1024 aaPredicted RBP18.17■□□□□ 0.5
SNRPA-209ENST00000601253 CCER2I3L3R5 266 aa18.17■□□□□ 0.5
SNRPA-209ENST00000601253 PTCD1O75127 700 aaKnown RBP18.17■□□□□ 0.5
SNRPA-209ENST00000601253 ZNF790Q6PG37 636 aa18.17■□□□□ 0.5
SNRPA-209ENST00000601253 C5P01031 1676 aa18.16■□□□□ 0.5
SNRPA-209ENST00000601253 BTBD11A6QL63 1104 aa18.16■□□□□ 0.5
SNRPA-209ENST00000601253 SLC39A6Q13433 755 aa18.16■□□□□ 0.5
SNRPA-209ENST00000601253 ITPK1Q13572 414 aa18.16■□□□□ 0.5
SNRPA-209ENST00000601253 TAF7Q15545 349 aaPredicted RBP18.16■□□□□ 0.5
SNRPA-209ENST00000601253 ZNF827Q17R98 1081 aa18.16■□□□□ 0.5
SNRPA-209ENST00000601253 SLC4A9Q96Q91 983 aa18.16■□□□□ 0.5
SNRPA-209ENST00000601253 DLG5Q8TDM6 1919 aa18.15■□□□□ 0.5
SNRPA-209ENST00000601253 KCPQ6ZWJ8 1503 aa18.15■□□□□ 0.5
SNRPA-209ENST00000601253 VSIG10Q8N0Z9 540 aa18.15■□□□□ 0.5
SNRPA-209ENST00000601253 RRP7AQ9Y3A4 280 aaKnown RBP18.15■□□□□ 0.5
SNRPA-209ENST00000601253 CICQ96RK0 1608 aaPredicted RBP18.15■□□□□ 0.5
SNRPA-209ENST00000601253 APAF1O14727 1248 aa18.14■□□□□ 0.49
SNRPA-209ENST00000601253 NEUROD2Q15784 382 aa18.14■□□□□ 0.49
SNRPA-209ENST00000601253 LINC00116Q8NCU8 138 aa18.14■□□□□ 0.49
SNRPA-209ENST00000601253 TFCP2L1Q9NZI6 479 aa18.14■□□□□ 0.49
SNRPA-209ENST00000601253 UBR2Q8IWV8 1755 aa18.13■□□□□ 0.49
SNRPA-209ENST00000601253 AK7Q96M32 723 aa18.13■□□□□ 0.49
SNRPA-209ENST00000601253 THUMPD2Q9BTF0 503 aaKnown RBP18.13■□□□□ 0.49
SNRPA-209ENST00000601253 TRIM35Q9UPQ4 493 aa18.13■□□□□ 0.49
SNRPA-209ENST00000601253 TAF1LQ8IZX4 1826 aa18.13■□□□□ 0.49
SNRPA-209ENST00000601253 C4BP0C0L5 1744 aa18.12■□□□□ 0.49
SNRPA-209ENST00000601253 NCBP3Q53F19 620 aaKnown RBP18.12■□□□□ 0.49
SNRPA-209ENST00000601253 RC3H1Q5TC82 1133 aaKnown RBP18.12■□□□□ 0.49
SNRPA-209ENST00000601253 FLAD1Q8NFF5 587 aa18.12■□□□□ 0.49
SNRPA-209ENST00000601253 ZNF496Q96IT1 587 aaPredicted RBP18.12■□□□□ 0.49
SNRPA-209ENST00000601253 FMNL2Q96PY5 1086 aa18.12■□□□□ 0.49
SNRPA-209ENST00000601253 BABAM1Q9NWV8 329 aa18.12■□□□□ 0.49
SNRPA-209ENST00000601253 CNTNAP4Q9C0A0 1308 aa18.12■□□□□ 0.49
SNRPA-209ENST00000601253 HEG1Q9ULI3 1381 aa18.11■□□□□ 0.49
SNRPA-209ENST00000601253 QSER1Q2KHR3 1735 aa18.11■□□□□ 0.49
SNRPA-209ENST00000601253 FAM9BQ8IZU0 186 aa18.1■□□□□ 0.49
SNRPA-209ENST00000601253 TEX13AQ9BXU3 409 aaPredicted RBP18.1■□□□□ 0.49
SNRPA-209ENST00000601253 COL5A3P25940 1745 aaPredicted RBP18.09■□□□□ 0.49
SNRPA-209ENST00000601253 PNPLA7Q6ZV29 1317 aa18.09■□□□□ 0.49
SNRPA-209ENST00000601253 CALD1Q05682 793 aaKnown RBP18.09■□□□□ 0.49
SNRPA-209ENST00000601253 CCDC27Q2M243 656 aa18.09■□□□□ 0.49
SNRPA-209ENST00000601253 DNAJC10Q8IXB1 793 aa18.09■□□□□ 0.49
SNRPA-209ENST00000601253 CASZ1Q86V15 1759 aa18.09■□□□□ 0.49
SNRPA-209ENST00000601253 TJP1Q07157 1748 aa18.09■□□□□ 0.49
SNRPA-209ENST00000601253 KCNQ3O43525 872 aa18.08■□□□□ 0.48
SNRPA-209ENST00000601253 SSFA2P28290 1259 aa18.08■□□□□ 0.48
SNRPA-209ENST00000601253 GNPATO15228 680 aa18.07■□□□□ 0.48
SNRPA-209ENST00000601253 STARD3NLO95772 234 aa18.07■□□□□ 0.48
SNRPA-209ENST00000601253 CYP19A1P11511 503 aaPredicted RBP18.07■□□□□ 0.48
SNRPA-209ENST00000601253 NGEFQ8N5V2 710 aa18.07■□□□□ 0.48
SNRPA-209ENST00000601253 SLC16A10Q8TF71 515 aa18.07■□□□□ 0.48
SNRPA-209ENST00000601253 TSPYL4Q9UJ04 414 aa18.07■□□□□ 0.48
SNRPA-209ENST00000601253 SNRPA1P09661 255 aaKnown RBP18.06■□□□□ 0.48
SNRPA-209ENST00000601253 ADRA2BP18089 450 aa18.06■□□□□ 0.48
SNRPA-209ENST00000601253 CRKLP46109 303 aaKnown RBP18.06■□□□□ 0.48
SNRPA-209ENST00000601253 PDGFDQ9GZP0 370 aaPredicted RBP18.06■□□□□ 0.48
SNRPA-209ENST00000601253 MIS18AQ9NYP9 233 aa18.06■□□□□ 0.48
SNRPA-209ENST00000601253 RTCBQ9Y3I0 505 aaKnown RBP18.06■□□□□ 0.48
SNRPA-209ENST00000601253 KDM3BQ7LBC6 1761 aa18.05■□□□□ 0.48
SNRPA-209ENST00000601253 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.05■□□□□ 0.48
SNRPA-209ENST00000601253 CHL1O00533 1208 aa18.05■□□□□ 0.48
SNRPA-209ENST00000601253 RPS6KA4O75676 772 aa18.05■□□□□ 0.48
SNRPA-209ENST00000601253 MIER1Q8N108 512 aa18.05■□□□□ 0.48
SNRPA-209ENST00000601253 MTFR1LQ9H019 292 aa18.05■□□□□ 0.48
SNRPA-209ENST00000601253 CCDC87Q9NVE4 849 aa18.05■□□□□ 0.48
SNRPA-209ENST00000601253 TUBGCP6Q96RT7 1819 aa18.05■□□□□ 0.48
SNRPA-209ENST00000601253 EIF4A1P60842 406 aaKnown RBP18.04■□□□□ 0.48
SNRPA-209ENST00000601253 INTS5Q6P9B9 1019 aaKnown RBP18.04■□□□□ 0.48
SNRPA-209ENST00000601253 COL23A1Q86Y22 540 aaPredicted RBP18.04■□□□□ 0.48
SNRPA-209ENST00000601253 CFAP44Q96MT7 982 aa18.04■□□□□ 0.48
SNRPA-209ENST00000601253 SPON1Q9HCB6 807 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms