RNA–Protein interactions for RNA: ENST00000601222.1

SIPA1L3-211, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 4

Gene SIPA1L3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-211ENST00000601222 PNPLA7Q6ZV29 1317 aa12.25□□□□□ -0.45
SIPA1L3-211ENST00000601222 RNMTO43148 476 aaKnown RBP12.24□□□□□ -0.45
SIPA1L3-211ENST00000601222 U2AF1L5P0DN76 240 aaPredicted RBP12.24□□□□□ -0.45
SIPA1L3-211ENST00000601222 MRC1P22897 1456 aa12.24□□□□□ -0.45
SIPA1L3-211ENST00000601222 U2AF1Q01081 240 aaKnown RBP eCLIP12.24□□□□□ -0.45
SIPA1L3-211ENST00000601222 UBR3Q6ZT12 1888 aa12.24□□□□□ -0.45
SIPA1L3-211ENST00000601222 NFATC2IPQ8NCF5 419 aa12.24□□□□□ -0.45
SIPA1L3-211ENST00000601222 GAS2L2Q8NHY3 880 aa12.24□□□□□ -0.45
SIPA1L3-211ENST00000601222 SLC16A10Q8TF71 515 aa12.24□□□□□ -0.45
SIPA1L3-211ENST00000601222 LGR6Q9HBX8 967 aa12.24□□□□□ -0.45
SIPA1L3-211ENST00000601222 ATF5Q9Y2D1 282 aaPredicted RBP12.24□□□□□ -0.45
SIPA1L3-211ENST00000601222 COL24A1Q17RW2 1714 aa12.23□□□□□ -0.45
SIPA1L3-211ENST00000601222 FCHSD2O94868 740 aa12.23□□□□□ -0.45
SIPA1L3-211ENST00000601222 PRKAR2BP31323 418 aa12.23□□□□□ -0.45
SIPA1L3-211ENST00000601222 ATP6V1AP38606 617 aa12.23□□□□□ -0.45
SIPA1L3-211ENST00000601222 PTGER2P43116 358 aa12.23□□□□□ -0.45
SIPA1L3-211ENST00000601222 SLC52A2Q9HAB3 445 aa12.23□□□□□ -0.45
SIPA1L3-211ENST00000601222 MAP3K5Q99683 1374 aa12.22□□□□□ -0.45
SIPA1L3-211ENST00000601222 ITPK1Q13572 414 aa12.22□□□□□ -0.45
SIPA1L3-211ENST00000601222 LINC00116Q8NCU8 138 aa12.22□□□□□ -0.45
SIPA1L3-211ENST00000601222 PHACTR3Q96KR7 559 aa12.22□□□□□ -0.45
SIPA1L3-211ENST00000601222 SGIP1Q9BQI5 828 aa12.22□□□□□ -0.45
SIPA1L3-211ENST00000601222 PPP1R1BQ9UD71 204 aaPredicted RBP12.22□□□□□ -0.45
SIPA1L3-211ENST00000601222 MYH14Q7Z406 1995 aaKnown RBP12.21□□□□□ -0.45
SIPA1L3-211ENST00000601222 COL5A3P25940 1745 aaPredicted RBP12.21□□□□□ -0.45
SIPA1L3-211ENST00000601222 GNAT3A8MTJ3 354 aa12.21□□□□□ -0.45
SIPA1L3-211ENST00000601222 COL23A1Q86Y22 540 aaPredicted RBP12.21□□□□□ -0.45
SIPA1L3-211ENST00000601222 FLAD1Q8NFF5 587 aa12.21□□□□□ -0.45
SIPA1L3-211ENST00000601222 AK7Q96M32 723 aa12.21□□□□□ -0.45
SIPA1L3-211ENST00000601222 SLC4A9Q96Q91 983 aa12.21□□□□□ -0.45
SIPA1L3-211ENST00000601222 RBM42Q9BTD8 480 aaKnown RBP12.21□□□□□ -0.45
SIPA1L3-211ENST00000601222 MYBBP1AQ9BQG0 1328 aaKnown RBP12.2□□□□□ -0.46
SIPA1L3-211ENST00000601222 SIPA1L3O60292 1781 aaPredicted RBP12.2□□□□□ -0.46
SIPA1L3-211ENST00000601222 CICQ96RK0 1608 aaPredicted RBP12.19□□□□□ -0.46
SIPA1L3-211ENST00000601222 UTRNP46939 3433 aa12.19□□□□□ -0.46
SIPA1L3-211ENST00000601222 PTCD1O75127 700 aaKnown RBP12.19□□□□□ -0.46
SIPA1L3-211ENST00000601222 IL17REQ8NFR9 667 aa12.19□□□□□ -0.46
SIPA1L3-211ENST00000601222 CEMIPQ8WUJ3 1361 aa12.18□□□□□ -0.46
SIPA1L3-211ENST00000601222 TJP1Q07157 1748 aa12.18□□□□□ -0.46
SIPA1L3-211ENST00000601222 DLG5Q8TDM6 1919 aa12.18□□□□□ -0.46
SIPA1L3-211ENST00000601222 MSH5O43196 834 aa12.18□□□□□ -0.46
SIPA1L3-211ENST00000601222 SSFA2P28290 1259 aa12.18□□□□□ -0.46
SIPA1L3-211ENST00000601222 RC3H1Q5TC82 1133 aaKnown RBP12.18□□□□□ -0.46
SIPA1L3-211ENST00000601222 AMIGO3Q86WK7 504 aa12.18□□□□□ -0.46
SIPA1L3-211ENST00000601222 UBR2Q8IWV8 1755 aa12.18□□□□□ -0.46
SIPA1L3-211ENST00000601222 CNTNAP4Q9C0A0 1308 aa12.17□□□□□ -0.46
SIPA1L3-211ENST00000601222 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.17□□□□□ -0.46
SIPA1L3-211ENST00000601222 GNPATO15228 680 aa12.17□□□□□ -0.46
SIPA1L3-211ENST00000601222 POLD1P28340 1107 aa12.17□□□□□ -0.46
SIPA1L3-211ENST00000601222 TEFQ10587 303 aa12.17□□□□□ -0.46
SIPA1L3-211ENST00000601222 SLC39A6Q13433 755 aa12.17□□□□□ -0.46
SIPA1L3-211ENST00000601222 ARXQ96QS3 562 aa12.17□□□□□ -0.46
SIPA1L3-211ENST00000601222 PNNQ9H307 717 aaKnown RBP12.17□□□□□ -0.46
SIPA1L3-211ENST00000601222 PRKRIP1Q9H875 184 aaPredicted RBP12.17□□□□□ -0.46
SIPA1L3-211ENST00000601222 KCPQ6ZWJ8 1503 aa12.16□□□□□ -0.46
SIPA1L3-211ENST00000601222 HTATSF1O43719 755 aaKnown RBP12.16□□□□□ -0.46
SIPA1L3-211ENST00000601222 PHF14O94880 888 aa12.16□□□□□ -0.46
SIPA1L3-211ENST00000601222 NEFMP07197 916 aa12.16□□□□□ -0.46
SIPA1L3-211ENST00000601222 PLEKHF1Q96S99 279 aa12.16□□□□□ -0.46
SIPA1L3-211ENST00000601222 GOLGB1Q14789 3259 aaKnown RBP12.15□□□□□ -0.46
SIPA1L3-211ENST00000601222 ZNF316A6NFI3 1004 aaPredicted RBP12.15□□□□□ -0.46
SIPA1L3-211ENST00000601222 SMIM5Q71RC9 77 aa12.15□□□□□ -0.46
SIPA1L3-211ENST00000601222 VSIG10Q8N0Z9 540 aa12.15□□□□□ -0.46
SIPA1L3-211ENST00000601222 RTF1Q92541 710 aaKnown RBP12.15□□□□□ -0.46
SIPA1L3-211ENST00000601222 RTCBQ9Y3I0 505 aaKnown RBP12.15□□□□□ -0.46
SIPA1L3-211ENST00000601222 RPS6KA4O75676 772 aa12.14□□□□□ -0.47
SIPA1L3-211ENST00000601222 ADRA2BP18089 450 aa12.14□□□□□ -0.47
SIPA1L3-211ENST00000601222 CRKLP46109 303 aaKnown RBP12.14□□□□□ -0.47
SIPA1L3-211ENST00000601222 TRAPPC3LQ5T215 181 aa12.14□□□□□ -0.47
SIPA1L3-211ENST00000601222 ZNF790Q6PG37 636 aa12.14□□□□□ -0.47
SIPA1L3-211ENST00000601222 TTC5Q8N0Z6 440 aa12.14□□□□□ -0.47
SIPA1L3-211ENST00000601222 SYT17Q9BSW7 474 aa12.14□□□□□ -0.47
SIPA1L3-211ENST00000601222 FHDC1Q9C0D6 1143 aaPredicted RBP12.14□□□□□ -0.47
SIPA1L3-211ENST00000601222 MSL1Q68DK7 614 aa12.13□□□□□ -0.47
SIPA1L3-211ENST00000601222 MCM10Q7L590 875 aa12.13□□□□□ -0.47
SIPA1L3-211ENST00000601222 DNAJC10Q8IXB1 793 aa12.13□□□□□ -0.47
SIPA1L3-211ENST00000601222 MAPK8IP3Q9UPT6 1336 aa12.12□□□□□ -0.47
SIPA1L3-211ENST00000601222 C4AP0C0L4 1744 aa12.12□□□□□ -0.47
SIPA1L3-211ENST00000601222 BTBD11A6QL63 1104 aa12.12□□□□□ -0.47
SIPA1L3-211ENST00000601222 CYP19A1P11511 503 aaPredicted RBP12.12□□□□□ -0.47
SIPA1L3-211ENST00000601222 NFE2L2Q16236 605 aa12.12□□□□□ -0.47
SIPA1L3-211ENST00000601222 INTS5Q6P9B9 1019 aaKnown RBP12.12□□□□□ -0.47
SIPA1L3-211ENST00000601222 ARHGEF1Q92888 912 aaKnown RBP12.12□□□□□ -0.47
SIPA1L3-211ENST00000601222 DCTN1Q14203 1278 aa12.11□□□□□ -0.47
SIPA1L3-211ENST00000601222 ZNF496Q96IT1 587 aaPredicted RBP12.11□□□□□ -0.47
SIPA1L3-211ENST00000601222 CCDC87Q9NVE4 849 aa12.11□□□□□ -0.47
SIPA1L3-211ENST00000601222 HEG1Q9ULI3 1381 aa12.1□□□□□ -0.47
SIPA1L3-211ENST00000601222 RFC4P35249 363 aa12.1□□□□□ -0.47
SIPA1L3-211ENST00000601222 WDR43Q15061 677 aaKnown RBP eCLIP12.1□□□□□ -0.47
SIPA1L3-211ENST00000601222 FMNL2Q96PY5 1086 aa12.1□□□□□ -0.47
SIPA1L3-211ENST00000601222 KCNQ3O43525 872 aa12.09□□□□□ -0.47
SIPA1L3-211ENST00000601222 STARD3NLO95772 234 aa12.09□□□□□ -0.47
SIPA1L3-211ENST00000601222 TAF7Q15545 349 aaPredicted RBP12.09□□□□□ -0.47
SIPA1L3-211ENST00000601222 TEX13AQ9BXU3 409 aaPredicted RBP12.09□□□□□ -0.47
SIPA1L3-211ENST00000601222 SOS1Q07889 1333 aaPredicted RBP12.09□□□□□ -0.47
SIPA1L3-211ENST00000601222 DCAF8L1A6NGE4 600 aa12.08□□□□□ -0.48
SIPA1L3-211ENST00000601222 GYS1P13807 737 aa12.08□□□□□ -0.48
SIPA1L3-211ENST00000601222 NLGN1Q8N2Q7 840 aa12.08□□□□□ -0.48
SIPA1L3-211ENST00000601222 ZBTB1Q9Y2K1 713 aa12.08□□□□□ -0.48
SIPA1L3-211ENST00000601222 KDM3BQ7LBC6 1761 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms