RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 TAF1LQ8IZX4 1826 aa15.11■□□□□ 0.01
ZNF548-211ENST00000600927 ERVV-2B6SEH9 535 aa15.11■□□□□ 0.01
ZNF548-211ENST00000600927 FCHSD2O94868 740 aa15.11■□□□□ 0.01
ZNF548-211ENST00000600927 STK32BQ9NY57 414 aa15.11■□□□□ 0.01
ZNF548-211ENST00000600927 KAT6BQ8WYB5 2073 aa15.11■□□□□ 0.01
ZNF548-211ENST00000600927 CICQ96RK0 1608 aaPredicted RBP15.1■□□□□ 0.01
ZNF548-211ENST00000600927 AKAP4Q5JQC9 854 aa15.09■□□□□ 0.01
ZNF548-211ENST00000600927 SMARCC1Q92922 1105 aaPredicted RBP15.09■□□□□ 0.01
ZNF548-211ENST00000600927 PDGFDQ9GZP0 370 aaPredicted RBP15.09■□□□□ 0.01
ZNF548-211ENST00000600927 RSPH6AQ9H0K4 717 aa15.09■□□□□ 0.01
ZNF548-211ENST00000600927 TMOD3Q9NYL9 352 aa15.09■□□□□ 0.01
ZNF548-211ENST00000600927 CCNL1Q9UK58 526 aaPredicted RBP15.09■□□□□ 0.01
ZNF548-211ENST00000600927 COL24A1Q17RW2 1714 aa15.09■□□□□ 0.01
ZNF548-211ENST00000600927 APAF1O14727 1248 aa15.08■□□□□ 0
ZNF548-211ENST00000600927 U2SURPO15042 1029 aaKnown RBP15.08■□□□□ 0
ZNF548-211ENST00000600927 NEFLP07196 543 aa15.08■□□□□ 0
ZNF548-211ENST00000600927 U2AF1L5P0DN76 240 aaPredicted RBP15.08■□□□□ 0
ZNF548-211ENST00000600927 KCNQ4P56696 695 aa15.08■□□□□ 0
ZNF548-211ENST00000600927 U2AF1Q01081 240 aaKnown RBP eCLIP15.08■□□□□ 0
ZNF548-211ENST00000600927 GOLGA2Q08379 1002 aa15.08■□□□□ 0
ZNF548-211ENST00000600927 MTHFSDQ2M296 383 aaKnown RBP15.08■□□□□ 0
ZNF548-211ENST00000600927 C1orf141Q5JVX7 400 aa15.08■□□□□ 0
ZNF548-211ENST00000600927 C4BP0C0L5 1744 aa15.08■□□□□ 0
ZNF548-211ENST00000600927 ATG3Q9NT62 314 aa15.07■□□□□ 0
ZNF548-211ENST00000600927 ASAP1Q9ULH1 1129 aa15.07■□□□□ 0
ZNF548-211ENST00000600927 VIRMAQ69YN4 1812 aaKnown RBP15.06■□□□□ 0
ZNF548-211ENST00000600927 WDR63Q8IWG1 891 aa15.06■□□□□ 0
ZNF548-211ENST00000600927 TRMT2AQ8IZ69 625 aaKnown RBP15.06■□□□□ 0
ZNF548-211ENST00000600927 PLEKHF1Q96S99 279 aa15.06■□□□□ 0
ZNF548-211ENST00000600927 RNF123Q5XPI4 1314 aa15.06■□□□□ 0
ZNF548-211ENST00000600927 PNPLA7Q6ZV29 1317 aa15.06■□□□□ 0
ZNF548-211ENST00000600927 LOC102724428A0A0B4J2F2 783 aa15.05■□□□□ -0
ZNF548-211ENST00000600927 SIK1P57059 783 aa15.05■□□□□ -0
ZNF548-211ENST00000600927 COL5A3P25940 1745 aaPredicted RBP15.05■□□□□ -0
ZNF548-211ENST00000600927 SIPA1L3O60292 1781 aaPredicted RBP15.04■□□□□ -0
ZNF548-211ENST00000600927 MAP3K5Q99683 1374 aa15.04■□□□□ -0
ZNF548-211ENST00000600927 E9PSI1 815 aa15.04■□□□□ -0
ZNF548-211ENST00000600927 RNMTO43148 476 aaKnown RBP15.04■□□□□ -0
ZNF548-211ENST00000600927 NEFMP07197 916 aa15.04■□□□□ -0
ZNF548-211ENST00000600927 PRKAR2BP31323 418 aa15.04■□□□□ -0
ZNF548-211ENST00000600927 PHACTR3Q96KR7 559 aa15.04■□□□□ -0
ZNF548-211ENST00000600927 SLC4A9Q96Q91 983 aa15.04■□□□□ -0
ZNF548-211ENST00000600927 SGIP1Q9BQI5 828 aa15.04■□□□□ -0
ZNF548-211ENST00000600927 SUPT16HQ9Y5B9 1047 aaKnown RBP15.04■□□□□ -0
ZNF548-211ENST00000600927 CEMIPQ8WUJ3 1361 aa15.03■□□□□ -0
ZNF548-211ENST00000600927 HMGB2P26583 209 aaKnown RBP15.03■□□□□ -0
ZNF548-211ENST00000600927 PTGER2P43116 358 aa15.03■□□□□ -0
ZNF548-211ENST00000600927 CABP4P57796 275 aa15.03■□□□□ -0
ZNF548-211ENST00000600927 SLFN5Q08AF3 891 aa15.03■□□□□ -0
ZNF548-211ENST00000600927 ITPK1Q13572 414 aa15.03■□□□□ -0
ZNF548-211ENST00000600927 CCDC146Q8IYE0 955 aa15.03■□□□□ -0
ZNF548-211ENST00000600927 GAS2L2Q8NHY3 880 aa15.03■□□□□ -0
ZNF548-211ENST00000600927 SLC52A2Q9HAB3 445 aa15.03■□□□□ -0
ZNF548-211ENST00000600927 LGR6Q9HBX8 967 aa15.03■□□□□ -0
ZNF548-211ENST00000600927 SPON1Q9HCB6 807 aa15.03■□□□□ -0
ZNF548-211ENST00000600927 UBR3Q6ZT12 1888 aa15.03■□□□□ -0
ZNF548-211ENST00000600927 UBR2Q8IWV8 1755 aa15.03■□□□□ -0
ZNF548-211ENST00000600927 TJP1Q07157 1748 aa15.03■□□□□ -0
ZNF548-211ENST00000600927 KCPQ6ZWJ8 1503 aa15.02■□□□□ -0
ZNF548-211ENST00000600927 WWC1Q8IX03 1113 aa15.02■□□□□ -0
ZNF548-211ENST00000600927 NFATC2IPQ8NCF5 419 aa15.02■□□□□ -0
ZNF548-211ENST00000600927 MTFR1LQ9H019 292 aa15.02■□□□□ -0
ZNF548-211ENST00000600927 MAPK8IP3Q9UPT6 1336 aa15.01□□□□□ -0.01
ZNF548-211ENST00000600927 LINC00116Q8NCU8 138 aa15.01□□□□□ -0.01
ZNF548-211ENST00000600927 ZBTB7AO95365 584 aa15□□□□□ -0.01
ZNF548-211ENST00000600927 DUSP27Q5VZP5 1158 aa15□□□□□ -0.01
ZNF548-211ENST00000600927 AMIGO3Q86WK7 504 aa15□□□□□ -0.01
ZNF548-211ENST00000600927 SLC16A10Q8TF71 515 aa15□□□□□ -0.01
ZNF548-211ENST00000600927 TFCP2L1Q9NZI6 479 aa15□□□□□ -0.01
ZNF548-211ENST00000600927 SALL2Q9Y467 1007 aaPredicted RBP15□□□□□ -0.01
ZNF548-211ENST00000600927 IL16Q14005 1332 aa14.99□□□□□ -0.01
ZNF548-211ENST00000600927 GNAT3A8MTJ3 354 aa14.99□□□□□ -0.01
ZNF548-211ENST00000600927 TMPOP42166 694 aaKnown RBP14.99□□□□□ -0.01
ZNF548-211ENST00000600927 IL17REQ8NFR9 667 aa14.99□□□□□ -0.01
ZNF548-211ENST00000600927 ATP6V1AP38606 617 aa14.98□□□□□ -0.01
ZNF548-211ENST00000600927 COL23A1Q86Y22 540 aaPredicted RBP14.98□□□□□ -0.01
ZNF548-211ENST00000600927 CDCA7LQ96GN5 454 aa14.98□□□□□ -0.01
ZNF548-211ENST00000600927 RCAN3Q9UKA8 241 aa14.98□□□□□ -0.01
ZNF548-211ENST00000600927 CNTNAP4Q9C0A0 1308 aa14.97□□□□□ -0.01
ZNF548-211ENST00000600927 CT47B1P0C2W7 299 aaPredicted RBP14.96□□□□□ -0.01
ZNF548-211ENST00000600927 SSFA2P28290 1259 aa14.96□□□□□ -0.01
ZNF548-211ENST00000600927 CALD1Q05682 793 aaKnown RBP14.96□□□□□ -0.01
ZNF548-211ENST00000600927 FKBP8Q14318 412 aa14.96□□□□□ -0.01
ZNF548-211ENST00000600927 FLAD1Q8NFF5 587 aa14.96□□□□□ -0.01
ZNF548-211ENST00000600927 AK7Q96M32 723 aa14.96□□□□□ -0.01
ZNF548-211ENST00000600927 LMOD3Q0VAK6 560 aa14.95□□□□□ -0.02
ZNF548-211ENST00000600927 RC3H1Q5TC82 1133 aaKnown RBP14.95□□□□□ -0.02
ZNF548-211ENST00000600927 MYH16Q9H6N6 1097 aa14.95□□□□□ -0.02
ZNF548-211ENST00000600927 ATF5Q9Y2D1 282 aaPredicted RBP14.95□□□□□ -0.02
ZNF548-211ENST00000600927 MYH14Q7Z406 1995 aaKnown RBP14.94□□□□□ -0.02
ZNF548-211ENST00000600927 HTATSF1O43719 755 aaKnown RBP14.94□□□□□ -0.02
ZNF548-211ENST00000600927 NFE2L2Q16236 605 aa14.94□□□□□ -0.02
ZNF548-211ENST00000600927 RBM42Q9BTD8 480 aaKnown RBP14.94□□□□□ -0.02
ZNF548-211ENST00000600927 DLG5Q8TDM6 1919 aa14.94□□□□□ -0.02
ZNF548-211ENST00000600927 C4AP0C0L4 1744 aa14.93□□□□□ -0.02
ZNF548-211ENST00000600927 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.93□□□□□ -0.02
ZNF548-211ENST00000600927 PTCD1O75127 700 aaKnown RBP14.93□□□□□ -0.02
ZNF548-211ENST00000600927 RIPK4P57078 832 aa14.93□□□□□ -0.02
ZNF548-211ENST00000600927 SLC39A6Q13433 755 aa14.93□□□□□ -0.02
ZNF548-211ENST00000600927 VSIG10Q8N0Z9 540 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms