RNA–Protein interactions for RNA: ENST00000600729.1

MIA-RAB4B-201, Transcript of MIA-RAB4B readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 5 BASIC

Gene MIA-RAB4B, Length 1,229 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIA-RAB4B-201ENST00000600729 HSPA8P11142 646 aaKnown RBP14.21□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 AMPHP49418 695 aa14.21□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 ZCRB1Q8TBF4 217 aaKnown RBP14.21□□□□□ -0.13
MIA-RAB4B-201ENST00000600729 UBR3Q6ZT12 1888 aa14.21□□□□□ -0.14
MIA-RAB4B-201ENST00000600729 SYTL4Q96C24 671 aaPredicted RBP14.2□□□□□ -0.14
MIA-RAB4B-201ENST00000600729 NCAPD2Q15021 1401 aa14.19□□□□□ -0.14
MIA-RAB4B-201ENST00000600729 HSP90AB2PQ58FF8 381 aa14.19□□□□□ -0.14
MIA-RAB4B-201ENST00000600729 CARD14Q9BXL6 1004 aa14.19□□□□□ -0.14
MIA-RAB4B-201ENST00000600729 CNTNAP1P78357 1384 aa14.19□□□□□ -0.14
MIA-RAB4B-201ENST00000600729 C9orf131Q5VYM1 1079 aa14.18□□□□□ -0.14
MIA-RAB4B-201ENST00000600729 CREBZFQ9NS37 354 aa14.18□□□□□ -0.14
MIA-RAB4B-201ENST00000600729 WBP1LQ9NX94 342 aa14.18□□□□□ -0.14
MIA-RAB4B-201ENST00000600729 INSRP06213 1382 aa14.18□□□□□ -0.14
MIA-RAB4B-201ENST00000600729 C4BP0C0L5 1744 aa14.18□□□□□ -0.14
MIA-RAB4B-201ENST00000600729 TRIM26Q12899 539 aaPredicted RBP14.17□□□□□ -0.14
MIA-RAB4B-201ENST00000600729 AMIGO3Q86WK7 504 aa14.17□□□□□ -0.14
MIA-RAB4B-201ENST00000600729 ARHGAP27Q6ZUM4 889 aa14.16□□□□□ -0.14
MIA-RAB4B-201ENST00000600729 EMILIN1Q9Y6C2 1016 aa14.16□□□□□ -0.14
MIA-RAB4B-201ENST00000600729 NSD3Q9BZ95 1437 aa14.15□□□□□ -0.14
MIA-RAB4B-201ENST00000600729 FLT4P35916 1363 aa14.15□□□□□ -0.14
MIA-RAB4B-201ENST00000600729 CYP27B1O15528 508 aa14.15□□□□□ -0.14
MIA-RAB4B-201ENST00000600729 CCNL1Q9UK58 526 aaPredicted RBP14.15□□□□□ -0.14
MIA-RAB4B-201ENST00000600729 TMF1P82094 1093 aa14.14□□□□□ -0.15
MIA-RAB4B-201ENST00000600729 SMIM5Q71RC9 77 aa14.14□□□□□ -0.15
MIA-RAB4B-201ENST00000600729 SMG6Q86US8 1419 aaKnown RBP14.14□□□□□ -0.15
MIA-RAB4B-201ENST00000600729 DLL1O00548 723 aa14.13□□□□□ -0.15
MIA-RAB4B-201ENST00000600729 PALLDQ8WX93 1383 aa14.12□□□□□ -0.15
MIA-RAB4B-201ENST00000600729 BCS1LQ9Y276 419 aa14.12□□□□□ -0.15
MIA-RAB4B-201ENST00000600729 CGNL1Q0VF96 1302 aa14.12□□□□□ -0.15
MIA-RAB4B-201ENST00000600729 PCDH11XQ9BZA7 1347 aa14.12□□□□□ -0.15
MIA-RAB4B-201ENST00000600729 PCDH11YQ9BZA8 1340 aa14.12□□□□□ -0.15
MIA-RAB4B-201ENST00000600729 KIF24Q5T7B8 1368 aa14.11□□□□□ -0.15
MIA-RAB4B-201ENST00000600729 CASP8AP2Q9UKL3 1982 aa14.11□□□□□ -0.15
MIA-RAB4B-201ENST00000600729 TATP17735 454 aaPredicted RBP14.11□□□□□ -0.15
MIA-RAB4B-201ENST00000600729 RAPGEF4Q8WZA2 1011 aa14.11□□□□□ -0.15
MIA-RAB4B-201ENST00000600729 VEGFBP49765 207 aa14.1□□□□□ -0.15
MIA-RAB4B-201ENST00000600729 COL5A3P25940 1745 aaPredicted RBP14.08□□□□□ -0.16
MIA-RAB4B-201ENST00000600729 MPRIPQ6WCQ1 1025 aa14.08□□□□□ -0.16
MIA-RAB4B-201ENST00000600729 RNF181Q9P0P0 153 aa14.08□□□□□ -0.16
MIA-RAB4B-201ENST00000600729 TIAM2Q8IVF5 1701 aa14.07□□□□□ -0.16
MIA-RAB4B-201ENST00000600729 SLC24A1O60721 1099 aa14.07□□□□□ -0.16
MIA-RAB4B-201ENST00000600729 VEGFAP15692 232 aaPredicted RBP14.07□□□□□ -0.16
MIA-RAB4B-201ENST00000600729 PIGBQ92521 554 aa14.07□□□□□ -0.16
MIA-RAB4B-201ENST00000600729 EYA1Q99502 592 aa14.07□□□□□ -0.16
MIA-RAB4B-201ENST00000600729 CCDC88AQ3V6T2 1871 aa14.07□□□□□ -0.16
MIA-RAB4B-201ENST00000600729 SZT2Q5T011 3432 aa14.06□□□□□ -0.16
MIA-RAB4B-201ENST00000600729 NKX1-1Q15270 411 aaPredicted RBP14.06□□□□□ -0.16
MIA-RAB4B-201ENST00000600729 MYH14Q7Z406 1995 aaKnown RBP14.05□□□□□ -0.16
MIA-RAB4B-201ENST00000600729 C4AP0C0L4 1744 aa14.05□□□□□ -0.16
MIA-RAB4B-201ENST00000600729 LINC00116Q8NCU8 138 aa14.05□□□□□ -0.16
MIA-RAB4B-201ENST00000600729 GCC1Q96CN9 775 aa14.05□□□□□ -0.16
MIA-RAB4B-201ENST00000600729 MCOLN1Q9GZU1 580 aa14.05□□□□□ -0.16
MIA-RAB4B-201ENST00000600729 POLKQ9UBT6 870 aa14.05□□□□□ -0.16
MIA-RAB4B-201ENST00000600729 WASHC2AQ641Q2 1341 aa14.05□□□□□ -0.16
MIA-RAB4B-201ENST00000600729 THSD7BQ9C0I4 1608 aa14.04□□□□□ -0.16
MIA-RAB4B-201ENST00000600729 ZNF831Q5JPB2 1677 aa14.04□□□□□ -0.16
MIA-RAB4B-201ENST00000600729 ITPK1Q13572 414 aa14.04□□□□□ -0.16
MIA-RAB4B-201ENST00000600729 PPM1GO15355 546 aaPredicted RBP14.03□□□□□ -0.16
MIA-RAB4B-201ENST00000600729 ASAP1Q9ULH1 1129 aa14.03□□□□□ -0.16
MIA-RAB4B-201ENST00000600729 KDRP35968 1356 aa14.03□□□□□ -0.16
MIA-RAB4B-201ENST00000600729 FCHSD2O94868 740 aa14.02□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 PHF14O94880 888 aa14.02□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 PHKG2P15735 406 aa14.02□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 CDCA8Q53HL2 280 aa14.02□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 HABP4Q5JVS0 413 aaKnown RBP14.02□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 FLAD1Q8NFF5 587 aa14.02□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 COL6A3P12111 3177 aa14.02□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 TJP1Q07157 1748 aa14.01□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 LTBP1Q14766 1721 aa14.01□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 KDM6AO15550 1401 aaPredicted RBP14.01□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.01□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 LOC102724428A0A0B4J2F2 783 aa14.01□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 SIK1P57059 783 aa14.01□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 MAP2K1Q02750 393 aaPredicted RBP14.01□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 EIF4A2Q14240 407 aaKnown RBP14.01□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 SLC4A9Q96Q91 983 aa14.01□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 ADAMTS7Q9UKP4 1686 aa14.01□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 A0A0G2JLW4 131 aa14□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 ZC3H4Q9UPT8 1303 aaKnown RBP13.99□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 TNNT2P45379 298 aaPredicted RBP13.99□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 SOX10P56693 466 aa13.99□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 SMARCC1Q92922 1105 aaPredicted RBP13.99□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 AK7Q96M32 723 aa13.99□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 ATG3Q9NT62 314 aa13.99□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 SCN11AQ9UI33 1791 aa13.99□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 TGFB2P61812 414 aa13.98□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.98□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 SPG7Q9UQ90 795 aa13.98□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 PITPNM2Q9BZ72 1349 aa13.97□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 GLTPD2A6NH11 291 aa13.97□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 TMOD3Q9NYL9 352 aa13.97□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 MKI67P46013 3256 aaKnown RBP13.96□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 SSFA2P28290 1259 aa13.96□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 CHADLQ6NUI6 762 aa13.96□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 IFNL2Q8IZJ0 200 aa13.96□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 POLR3GLQ9BT43 218 aa13.96□□□□□ -0.17
MIA-RAB4B-201ENST00000600729 POTECB2RU33 542 aa13.95□□□□□ -0.18
MIA-RAB4B-201ENST00000600729 GNPATO15228 680 aa13.95□□□□□ -0.18
MIA-RAB4B-201ENST00000600729 HSPA5P11021 654 aaKnown RBP13.95□□□□□ -0.18
MIA-RAB4B-201ENST00000600729 ATP6V1AP38606 617 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms