RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 U2AF1L5P0DN76 240 aaPredicted RBP21.11■□□□□ 0.97
RPS28-203ENST00000600659 U2AF1Q01081 240 aaKnown RBP eCLIP21.11■□□□□ 0.97
RPS28-203ENST00000600659 PRKRIP1Q9H875 184 aaPredicted RBP21.11■□□□□ 0.97
RPS28-203ENST00000600659 LGR6Q9HBX8 967 aa21.11■□□□□ 0.97
RPS28-203ENST00000600659 STK32BQ9NY57 414 aa21.11■□□□□ 0.97
RPS28-203ENST00000600659 NUDCQ9Y266 331 aa21.11■□□□□ 0.97
RPS28-203ENST00000600659 UBR2Q8IWV8 1755 aa21.1■□□□□ 0.97
RPS28-203ENST00000600659 SMARCC1Q92922 1105 aaPredicted RBP21.1■□□□□ 0.97
RPS28-203ENST00000600659 TJP1Q07157 1748 aa21.1■□□□□ 0.97
RPS28-203ENST00000600659 MAP3K5Q99683 1374 aa21.09■□□□□ 0.97
RPS28-203ENST00000600659 RNMTO43148 476 aaKnown RBP21.09■□□□□ 0.97
RPS28-203ENST00000600659 FCHSD2O94868 740 aa21.08■□□□□ 0.97
RPS28-203ENST00000600659 SLC4A9Q96Q91 983 aa21.08■□□□□ 0.97
RPS28-203ENST00000600659 LOC102724428A0A0B4J2F2 783 aa21.07■□□□□ 0.96
RPS28-203ENST00000600659 SIK1P57059 783 aa21.07■□□□□ 0.96
RPS28-203ENST00000600659 CABP4P57796 275 aa21.07■□□□□ 0.96
RPS28-203ENST00000600659 PNPLA7Q6ZV29 1317 aa21.07■□□□□ 0.96
RPS28-203ENST00000600659 MYH14Q7Z406 1995 aaKnown RBP21.07■□□□□ 0.96
RPS28-203ENST00000600659 NFATC2IPQ8NCF5 419 aa21.06■□□□□ 0.96
RPS28-203ENST00000600659 GAS2L2Q8NHY3 880 aa21.06■□□□□ 0.96
RPS28-203ENST00000600659 PLEKHF1Q96S99 279 aa21.06■□□□□ 0.96
RPS28-203ENST00000600659 KCPQ6ZWJ8 1503 aa21.06■□□□□ 0.96
RPS28-203ENST00000600659 CEMIPQ8WUJ3 1361 aa21.06■□□□□ 0.96
RPS28-203ENST00000600659 ITPK1Q13572 414 aa21.05■□□□□ 0.96
RPS28-203ENST00000600659 IL17REQ8NFR9 667 aa21.05■□□□□ 0.96
RPS28-203ENST00000600659 SLC52A2Q9HAB3 445 aa21.05■□□□□ 0.96
RPS28-203ENST00000600659 AMIGO3Q86WK7 504 aa21.04■□□□□ 0.96
RPS28-203ENST00000600659 LINC00116Q8NCU8 138 aa21.04■□□□□ 0.96
RPS28-203ENST00000600659 GNAT3A8MTJ3 354 aa21.03■□□□□ 0.96
RPS28-203ENST00000600659 SGIP1Q9BQI5 828 aa21.01■□□□□ 0.95
RPS28-203ENST00000600659 ZBTB7AO95365 584 aa21■□□□□ 0.95
RPS28-203ENST00000600659 PTGER2P43116 358 aa21■□□□□ 0.95
RPS28-203ENST00000600659 TFCP2L1Q9NZI6 479 aa21■□□□□ 0.95
RPS28-203ENST00000600659 ATP6V1AP38606 617 aa20.99■□□□□ 0.95
RPS28-203ENST00000600659 SLC39A6Q13433 755 aa20.98■□□□□ 0.95
RPS28-203ENST00000600659 RBM42Q9BTD8 480 aaKnown RBP20.98■□□□□ 0.95
RPS28-203ENST00000600659 SPON1Q9HCB6 807 aa20.98■□□□□ 0.95
RPS28-203ENST00000600659 C4AP0C0L4 1744 aa20.97■□□□□ 0.95
RPS28-203ENST00000600659 SMIM5Q71RC9 77 aa20.97■□□□□ 0.95
RPS28-203ENST00000600659 COL23A1Q86Y22 540 aaPredicted RBP20.97■□□□□ 0.95
RPS28-203ENST00000600659 MTFR1LQ9H019 292 aa20.97■□□□□ 0.95
RPS28-203ENST00000600659 PTCD1O75127 700 aaKnown RBP20.96■□□□□ 0.95
RPS28-203ENST00000600659 KDM3BQ7LBC6 1761 aa20.95■□□□□ 0.94
RPS28-203ENST00000600659 MCM10Q7L590 875 aa20.95■□□□□ 0.94
RPS28-203ENST00000600659 ATF5Q9Y2D1 282 aaPredicted RBP20.95■□□□□ 0.94
RPS28-203ENST00000600659 DCTN1Q14203 1278 aa20.94■□□□□ 0.94
RPS28-203ENST00000600659 CCDC184Q52MB2 194 aa20.94■□□□□ 0.94
RPS28-203ENST00000600659 CNTNAP4Q9C0A0 1308 aa20.94■□□□□ 0.94
RPS28-203ENST00000600659 NFE2L2Q16236 605 aa20.93■□□□□ 0.94
RPS28-203ENST00000600659 AK7Q96M32 723 aa20.93■□□□□ 0.94
RPS28-203ENST00000600659 HTATSF1O43719 755 aaKnown RBP20.92■□□□□ 0.94
RPS28-203ENST00000600659 TEFQ10587 303 aa20.92■□□□□ 0.94
RPS28-203ENST00000600659 SLC16A10Q8TF71 515 aa20.92■□□□□ 0.94
RPS28-203ENST00000600659 HMGB2P26583 209 aaKnown RBP20.91■□□□□ 0.94
RPS28-203ENST00000600659 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.9■□□□□ 0.94
RPS28-203ENST00000600659 GNPATO15228 680 aa20.9■□□□□ 0.94
RPS28-203ENST00000600659 KCNQ3O43525 872 aa20.9■□□□□ 0.94
RPS28-203ENST00000600659 SSFA2P28290 1259 aa20.9■□□□□ 0.94
RPS28-203ENST00000600659 RC3H1Q5TC82 1133 aaKnown RBP20.9■□□□□ 0.94
RPS28-203ENST00000600659 ZNF790Q6PG37 636 aa20.9■□□□□ 0.94
RPS28-203ENST00000600659 DNAJC10Q8IXB1 793 aa20.9■□□□□ 0.94
RPS28-203ENST00000600659 ADAMTS8Q9UP79 889 aa20.89■□□□□ 0.93
RPS28-203ENST00000600659 MAPK8IP3Q9UPT6 1336 aa20.89■□□□□ 0.93
RPS28-203ENST00000600659 PHF14O94880 888 aa20.88■□□□□ 0.93
RPS28-203ENST00000600659 VSIG10Q8N0Z9 540 aa20.88■□□□□ 0.93
RPS28-203ENST00000600659 RTF1Q92541 710 aaKnown RBP20.88■□□□□ 0.93
RPS28-203ENST00000600659 ZNF496Q96IT1 587 aaPredicted RBP20.88■□□□□ 0.93
RPS28-203ENST00000600659 PNNQ9H307 717 aaKnown RBP20.88■□□□□ 0.93
RPS28-203ENST00000600659 CRKLP46109 303 aaKnown RBP20.87■□□□□ 0.93
RPS28-203ENST00000600659 INTS5Q6P9B9 1019 aaKnown RBP20.87■□□□□ 0.93
RPS28-203ENST00000600659 CCDC146Q8IYE0 955 aa20.87■□□□□ 0.93
RPS28-203ENST00000600659 FLAD1Q8NFF5 587 aa20.87■□□□□ 0.93
RPS28-203ENST00000600659 HEG1Q9ULI3 1381 aa20.87■□□□□ 0.93
RPS28-203ENST00000600659 CYP19A1P11511 503 aaPredicted RBP20.86■□□□□ 0.93
RPS28-203ENST00000600659 THUMPD2Q9BTF0 503 aaKnown RBP20.86■□□□□ 0.93
RPS28-203ENST00000600659 LAMB4A4D0S4 1761 aa20.85■□□□□ 0.93
RPS28-203ENST00000600659 BTBD11A6QL63 1104 aa20.85■□□□□ 0.93
RPS28-203ENST00000600659 RPS6KA4O75676 772 aa20.85■□□□□ 0.93
RPS28-203ENST00000600659 NEFMP07197 916 aa20.85■□□□□ 0.93
RPS28-203ENST00000600659 TMPOP42166 694 aaKnown RBP20.85■□□□□ 0.93
RPS28-203ENST00000600659 WDR43Q15061 677 aaKnown RBP eCLIP20.85■□□□□ 0.93
RPS28-203ENST00000600659 TTC5Q8N0Z6 440 aa20.84■□□□□ 0.93
RPS28-203ENST00000600659 MSL1Q68DK7 614 aa20.83■□□□□ 0.93
RPS28-203ENST00000600659 RUNDC1Q96C34 613 aa20.83■□□□□ 0.93
RPS28-203ENST00000600659 RTCBQ9Y3I0 505 aaKnown RBP20.83■□□□□ 0.93
RPS28-203ENST00000600659 MSH5O43196 834 aa20.82■□□□□ 0.92
RPS28-203ENST00000600659 ARHGEF1Q92888 912 aaKnown RBP20.82■□□□□ 0.92
RPS28-203ENST00000600659 ZBTB1Q9Y2K1 713 aa20.82■□□□□ 0.92
RPS28-203ENST00000600659 SOS1Q07889 1333 aaPredicted RBP20.82■□□□□ 0.92
RPS28-203ENST00000600659 ANP32CO43423 234 aa20.81■□□□□ 0.92
RPS28-203ENST00000600659 ADRA2BP18089 450 aa20.81■□□□□ 0.92
RPS28-203ENST00000600659 RIPK4P57078 832 aa20.81■□□□□ 0.92
RPS28-203ENST00000600659 TAF7Q15545 349 aaPredicted RBP20.81■□□□□ 0.92
RPS28-203ENST00000600659 FMNL2Q96PY5 1086 aa20.81■□□□□ 0.92
RPS28-203ENST00000600659 ARXQ96QS3 562 aa20.81■□□□□ 0.92
RPS28-203ENST00000600659 CCDC87Q9NVE4 849 aa20.81■□□□□ 0.92
RPS28-203ENST00000600659 PPP1R1BQ9UD71 204 aaPredicted RBP20.81■□□□□ 0.92
RPS28-203ENST00000600659 RRP7AQ9Y3A4 280 aaKnown RBP20.81■□□□□ 0.92
RPS28-203ENST00000600659 PRAMEF22A3QJZ6 481 aa20.8■□□□□ 0.92
RPS28-203ENST00000600659 MIS18AQ9NYP9 233 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms