RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 CASZ1Q86V15 1759 aa18.02■□□□□ 0.47
ARHGEF1-222ENST00000600517 GAS2L2Q8NHY3 880 aa18.01■□□□□ 0.47
ARHGEF1-222ENST00000600517 SLC52A2Q9HAB3 445 aa18.01■□□□□ 0.47
ARHGEF1-222ENST00000600517 ATF5Q9Y2D1 282 aaPredicted RBP18.01■□□□□ 0.47
ARHGEF1-222ENST00000600517 ATP6V1AP38606 617 aa18■□□□□ 0.47
ARHGEF1-222ENST00000600517 ITPK1Q13572 414 aa18■□□□□ 0.47
ARHGEF1-222ENST00000600517 GNAT3A8MTJ3 354 aa17.99■□□□□ 0.47
ARHGEF1-222ENST00000600517 PTGER2P43116 358 aa17.99■□□□□ 0.47
ARHGEF1-222ENST00000600517 SLC4A9Q96Q91 983 aa17.99■□□□□ 0.47
ARHGEF1-222ENST00000600517 COL23A1Q86Y22 540 aaPredicted RBP17.98■□□□□ 0.47
ARHGEF1-222ENST00000600517 LINC00116Q8NCU8 138 aa17.98■□□□□ 0.47
ARHGEF1-222ENST00000600517 FLAD1Q8NFF5 587 aa17.98■□□□□ 0.47
ARHGEF1-222ENST00000600517 SGIP1Q9BQI5 828 aa17.98■□□□□ 0.47
ARHGEF1-222ENST00000600517 IL17REQ8NFR9 667 aa17.97■□□□□ 0.47
ARHGEF1-222ENST00000600517 RBM42Q9BTD8 480 aaKnown RBP17.97■□□□□ 0.47
ARHGEF1-222ENST00000600517 PPP1R1BQ9UD71 204 aaPredicted RBP17.97■□□□□ 0.47
ARHGEF1-222ENST00000600517 MAP3K5Q99683 1374 aa17.96■□□□□ 0.47
ARHGEF1-222ENST00000600517 AK7Q96M32 723 aa17.96■□□□□ 0.47
ARHGEF1-222ENST00000600517 MYBBP1AQ9BQG0 1328 aaKnown RBP17.96■□□□□ 0.46
ARHGEF1-222ENST00000600517 PTCD1O75127 700 aaKnown RBP17.95■□□□□ 0.46
ARHGEF1-222ENST00000600517 C5P01031 1676 aa17.95■□□□□ 0.46
ARHGEF1-222ENST00000600517 ZNF316A6NFI3 1004 aaPredicted RBP17.94■□□□□ 0.46
ARHGEF1-222ENST00000600517 RC3H1Q5TC82 1133 aaKnown RBP17.94■□□□□ 0.46
ARHGEF1-222ENST00000600517 QSER1Q2KHR3 1735 aa17.94■□□□□ 0.46
ARHGEF1-222ENST00000600517 MRC1P22897 1456 aa17.94■□□□□ 0.46
ARHGEF1-222ENST00000600517 SCN11AQ9UI33 1791 aa17.94■□□□□ 0.46
ARHGEF1-222ENST00000600517 ADAMTS7Q9UKP4 1686 aa17.93■□□□□ 0.46
ARHGEF1-222ENST00000600517 MSH5O43196 834 aa17.93■□□□□ 0.46
ARHGEF1-222ENST00000600517 AMIGO3Q86WK7 504 aa17.93■□□□□ 0.46
ARHGEF1-222ENST00000600517 PRKRIP1Q9H875 184 aaPredicted RBP17.93■□□□□ 0.46
ARHGEF1-222ENST00000600517 C4BP0C0L5 1744 aa17.92■□□□□ 0.46
ARHGEF1-222ENST00000600517 SSFA2P28290 1259 aa17.92■□□□□ 0.46
ARHGEF1-222ENST00000600517 TEFQ10587 303 aa17.92■□□□□ 0.46
ARHGEF1-222ENST00000600517 PLEKHF1Q96S99 279 aa17.92■□□□□ 0.46
ARHGEF1-222ENST00000600517 TAF1LQ8IZX4 1826 aa17.92■□□□□ 0.46
ARHGEF1-222ENST00000600517 CEMIPQ8WUJ3 1361 aa17.91■□□□□ 0.46
ARHGEF1-222ENST00000600517 ZNF831Q5JPB2 1677 aa17.91■□□□□ 0.46
ARHGEF1-222ENST00000600517 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.91■□□□□ 0.46
ARHGEF1-222ENST00000600517 GNPATO15228 680 aa17.91■□□□□ 0.46
ARHGEF1-222ENST00000600517 HTATSF1O43719 755 aaKnown RBP17.91■□□□□ 0.46
ARHGEF1-222ENST00000600517 SLC39A6Q13433 755 aa17.91■□□□□ 0.46
ARHGEF1-222ENST00000600517 ARXQ96QS3 562 aa17.91■□□□□ 0.46
ARHGEF1-222ENST00000600517 PNNQ9H307 717 aaKnown RBP17.91■□□□□ 0.46
ARHGEF1-222ENST00000600517 NEFMP07197 916 aa17.9■□□□□ 0.46
ARHGEF1-222ENST00000600517 POLD1P28340 1107 aa17.9■□□□□ 0.46
ARHGEF1-222ENST00000600517 SMIM5Q71RC9 77 aa17.9■□□□□ 0.46
ARHGEF1-222ENST00000600517 CNTNAP4Q9C0A0 1308 aa17.9■□□□□ 0.46
ARHGEF1-222ENST00000600517 PHF14O94880 888 aa17.89■□□□□ 0.45
ARHGEF1-222ENST00000600517 RTF1Q92541 710 aaKnown RBP17.89■□□□□ 0.45
ARHGEF1-222ENST00000600517 TUBGCP6Q96RT7 1819 aa17.88■□□□□ 0.45
ARHGEF1-222ENST00000600517 RPS6KA4O75676 772 aa17.88■□□□□ 0.45
ARHGEF1-222ENST00000600517 VSIG10Q8N0Z9 540 aa17.88■□□□□ 0.45
ARHGEF1-222ENST00000600517 RTCBQ9Y3I0 505 aaKnown RBP17.88■□□□□ 0.45
ARHGEF1-222ENST00000600517 TRAPPC3LQ5T215 181 aa17.87■□□□□ 0.45
ARHGEF1-222ENST00000600517 ZNF790Q6PG37 636 aa17.87■□□□□ 0.45
ARHGEF1-222ENST00000600517 MCM10Q7L590 875 aa17.87■□□□□ 0.45
ARHGEF1-222ENST00000600517 DNAJC10Q8IXB1 793 aa17.87■□□□□ 0.45
ARHGEF1-222ENST00000600517 ADRA2BP18089 450 aa17.86■□□□□ 0.45
ARHGEF1-222ENST00000600517 CRKLP46109 303 aaKnown RBP17.86■□□□□ 0.45
ARHGEF1-222ENST00000600517 TTC5Q8N0Z6 440 aa17.86■□□□□ 0.45
ARHGEF1-222ENST00000600517 SYT17Q9BSW7 474 aa17.86■□□□□ 0.45
ARHGEF1-222ENST00000600517 FHDC1Q9C0D6 1143 aaPredicted RBP17.86■□□□□ 0.45
ARHGEF1-222ENST00000600517 CYP19A1P11511 503 aaPredicted RBP17.85■□□□□ 0.45
ARHGEF1-222ENST00000600517 DCTN1Q14203 1278 aa17.85■□□□□ 0.45
ARHGEF1-222ENST00000600517 NFE2L2Q16236 605 aa17.85■□□□□ 0.45
ARHGEF1-222ENST00000600517 MSL1Q68DK7 614 aa17.85■□□□□ 0.45
ARHGEF1-222ENST00000600517 INTS5Q6P9B9 1019 aaKnown RBP17.85■□□□□ 0.45
ARHGEF1-222ENST00000600517 KCPQ6ZWJ8 1503 aa17.85■□□□□ 0.45
ARHGEF1-222ENST00000600517 ZNF496Q96IT1 587 aaPredicted RBP17.85■□□□□ 0.45
ARHGEF1-222ENST00000600517 MAPK8IP3Q9UPT6 1336 aa17.84■□□□□ 0.45
ARHGEF1-222ENST00000600517 BTBD11A6QL63 1104 aa17.84■□□□□ 0.45
ARHGEF1-222ENST00000600517 ARHGEF1Q92888 912 aaKnown RBP17.84■□□□□ 0.45
ARHGEF1-222ENST00000600517 UBR3Q6ZT12 1888 aa17.84■□□□□ 0.45
ARHGEF1-222ENST00000600517 COL24A1Q17RW2 1714 aa17.84■□□□□ 0.45
ARHGEF1-222ENST00000600517 CCDC87Q9NVE4 849 aa17.83■□□□□ 0.44
ARHGEF1-222ENST00000600517 TAF7Q15545 349 aaPredicted RBP17.82■□□□□ 0.44
ARHGEF1-222ENST00000600517 FMNL2Q96PY5 1086 aa17.82■□□□□ 0.44
ARHGEF1-222ENST00000600517 TEX13AQ9BXU3 409 aaPredicted RBP17.82■□□□□ 0.44
ARHGEF1-222ENST00000600517 CICQ96RK0 1608 aaPredicted RBP17.82■□□□□ 0.44
ARHGEF1-222ENST00000600517 COL5A3P25940 1745 aaPredicted RBP17.81■□□□□ 0.44
ARHGEF1-222ENST00000600517 KCNQ3O43525 872 aa17.81■□□□□ 0.44
ARHGEF1-222ENST00000600517 WDR43Q15061 677 aaKnown RBP eCLIP17.81■□□□□ 0.44
ARHGEF1-222ENST00000600517 TJP1Q07157 1748 aa17.81■□□□□ 0.44
ARHGEF1-222ENST00000600517 HEG1Q9ULI3 1381 aa17.8■□□□□ 0.44
ARHGEF1-222ENST00000600517 STARD3NLO95772 234 aa17.8■□□□□ 0.44
ARHGEF1-222ENST00000600517 RFC4P35249 363 aa17.8■□□□□ 0.44
ARHGEF1-222ENST00000600517 NLGN1Q8N2Q7 840 aa17.8■□□□□ 0.44
ARHGEF1-222ENST00000600517 ADAMTS8Q9UP79 889 aa17.8■□□□□ 0.44
ARHGEF1-222ENST00000600517 VIRMAQ69YN4 1812 aaKnown RBP17.79■□□□□ 0.44
ARHGEF1-222ENST00000600517 SIPA1L3O60292 1781 aaPredicted RBP17.79■□□□□ 0.44
ARHGEF1-222ENST00000600517 GYS1P13807 737 aa17.79■□□□□ 0.44
ARHGEF1-222ENST00000600517 RIPK4P57078 832 aa17.78■□□□□ 0.44
ARHGEF1-222ENST00000600517 RUNDC1Q96C34 613 aa17.78■□□□□ 0.44
ARHGEF1-222ENST00000600517 MYH14Q7Z406 1995 aaKnown RBP17.78■□□□□ 0.44
ARHGEF1-222ENST00000600517 UBR2Q8IWV8 1755 aa17.78■□□□□ 0.44
ARHGEF1-222ENST00000600517 SOS1Q07889 1333 aaPredicted RBP17.77■□□□□ 0.44
ARHGEF1-222ENST00000600517 DCAF8L1A6NGE4 600 aa17.77■□□□□ 0.44
ARHGEF1-222ENST00000600517 TMPOP42166 694 aaKnown RBP17.77■□□□□ 0.44
ARHGEF1-222ENST00000600517 PNISRQ8TF01 805 aaKnown RBP17.77■□□□□ 0.44
ARHGEF1-222ENST00000600517 ZBTB1Q9Y2K1 713 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms