RNA–Protein interactions for RNA: ENST00000600475.1

SHD-205, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

TSL 3

Gene SHD, Length 379 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-205ENST00000600475 APBA3O96018 575 aa13.32□□□□□ -0.28
SHD-205ENST00000600475 TNS1Q9HBL0 1735 aaKnown RBP13.32□□□□□ -0.28
SHD-205ENST00000600475 VIRMAQ69YN4 1812 aaKnown RBP13.32□□□□□ -0.28
SHD-205ENST00000600475 SF3B2Q13435 895 aaKnown RBP13.31□□□□□ -0.28
SHD-205ENST00000600475 TAF7Q15545 349 aaPredicted RBP13.31□□□□□ -0.28
SHD-205ENST00000600475 ATG3Q9NT62 314 aa13.31□□□□□ -0.28
SHD-205ENST00000600475 ASAP1Q9ULH1 1129 aa13.31□□□□□ -0.28
SHD-205ENST00000600475 BTAF1O14981 1849 aa13.31□□□□□ -0.28
SHD-205ENST00000600475 SENP3-EIF4A1A0A087X0R7 540 aa13.3□□□□□ -0.28
SHD-205ENST00000600475 SOCS7O14512 581 aa13.3□□□□□ -0.28
SHD-205ENST00000600475 BAG6P46379 1132 aa13.3□□□□□ -0.28
SHD-205ENST00000600475 WWC1Q8IX03 1113 aa13.3□□□□□ -0.28
SHD-205ENST00000600475 SMARCC1Q92922 1105 aaPredicted RBP13.3□□□□□ -0.28
SHD-205ENST00000600475 CAMKK2Q96RR4 588 aa13.3□□□□□ -0.28
SHD-205ENST00000600475 DEFB132Q7Z7B7 95 aa13.29□□□□□ -0.28
SHD-205ENST00000600475 BABAM1Q9NWV8 329 aa13.29□□□□□ -0.28
SHD-205ENST00000600475 SIPA1L3O60292 1781 aaPredicted RBP13.29□□□□□ -0.28
SHD-205ENST00000600475 BTBD11A6QL63 1104 aa13.28□□□□□ -0.28
SHD-205ENST00000600475 CHL1O00533 1208 aa13.28□□□□□ -0.28
SHD-205ENST00000600475 EN1Q05925 392 aaPredicted RBP13.28□□□□□ -0.28
SHD-205ENST00000600475 SLC39A6Q13433 755 aa13.28□□□□□ -0.28
SHD-205ENST00000600475 PROM2Q8N271 834 aa13.28□□□□□ -0.28
SHD-205ENST00000600475 ZNF521Q96K83 1311 aa13.28□□□□□ -0.28
SHD-205ENST00000600475 ZNF853P0CG23 659 aa13.27□□□□□ -0.29
SHD-205ENST00000600475 CALD1Q05682 793 aaKnown RBP13.27□□□□□ -0.29
SHD-205ENST00000600475 ZNF790Q6PG37 636 aa13.27□□□□□ -0.29
SHD-205ENST00000600475 WDR63Q8IWG1 891 aa13.27□□□□□ -0.29
SHD-205ENST00000600475 SALL2Q9Y467 1007 aaPredicted RBP13.27□□□□□ -0.29
SHD-205ENST00000600475 PALLDQ8WX93 1383 aa13.27□□□□□ -0.29
SHD-205ENST00000600475 IL16Q14005 1332 aa13.26□□□□□ -0.29
SHD-205ENST00000600475 TXNRD1Q16881 649 aa13.26□□□□□ -0.29
SHD-205ENST00000600475 CFAP44Q96MT7 982 aa13.26□□□□□ -0.29
SHD-205ENST00000600475 MIS18AQ9NYP9 233 aa13.26□□□□□ -0.29
SHD-205ENST00000600475 RGPD3A6NKT7 1758 aaPredicted RBP13.25□□□□□ -0.29
SHD-205ENST00000600475 RGPD4Q7Z3J3 1758 aa13.25□□□□□ -0.29
SHD-205ENST00000600475 LOC102724428A0A0B4J2F2 783 aa13.25□□□□□ -0.29
SHD-205ENST00000600475 KCNQ3O43525 872 aa13.25□□□□□ -0.29
SHD-205ENST00000600475 SIK1P57059 783 aa13.25□□□□□ -0.29
SHD-205ENST00000600475 EZH2Q15910 746 aaKnown RBP13.25□□□□□ -0.29
SHD-205ENST00000600475 SLC27A3Q5K4L6 730 aa13.25□□□□□ -0.29
SHD-205ENST00000600475 SLC4A9Q96Q91 983 aa13.25□□□□□ -0.29
SHD-205ENST00000600475 IFT57Q9NWB7 429 aa13.25□□□□□ -0.29
SHD-205ENST00000600475 PAPPAQ13219 1627 aa13.24□□□□□ -0.29
SHD-205ENST00000600475 PTCD1O75127 700 aaKnown RBP13.24□□□□□ -0.29
SHD-205ENST00000600475 GNAI1P63096 354 aa13.24□□□□□ -0.29
SHD-205ENST00000600475 ZNF496Q96IT1 587 aaPredicted RBP13.24□□□□□ -0.29
SHD-205ENST00000600475 LRRC4BQ9NT99 713 aa13.24□□□□□ -0.29
SHD-205ENST00000600475 TSPYL4Q9UJ04 414 aa13.24□□□□□ -0.29
SHD-205ENST00000600475 LY75O60449 1722 aa13.24□□□□□ -0.29
SHD-205ENST00000600475 KCPQ6ZWJ8 1503 aa13.23□□□□□ -0.29
SHD-205ENST00000600475 HEG1Q9ULI3 1381 aa13.23□□□□□ -0.29
SHD-205ENST00000600475 TTC5Q8N0Z6 440 aa13.23□□□□□ -0.29
SHD-205ENST00000600475 VSIG10Q8N0Z9 540 aa13.23□□□□□ -0.29
SHD-205ENST00000600475 RBM42Q9BTD8 480 aaKnown RBP13.23□□□□□ -0.29
SHD-205ENST00000600475 CCNL1Q9UK58 526 aaPredicted RBP13.23□□□□□ -0.29
SHD-205ENST00000600475 UBR2Q8IWV8 1755 aa13.22□□□□□ -0.29
SHD-205ENST00000600475 EIF4A1P60842 406 aaKnown RBP13.22□□□□□ -0.29
SHD-205ENST00000600475 HNRNPUQ00839 825 aaKnown RBP eCLIP13.22□□□□□ -0.29
SHD-205ENST00000600475 FMNL2Q96PY5 1086 aa13.22□□□□□ -0.29
SHD-205ENST00000600475 MBIPQ9NS73 344 aa13.22□□□□□ -0.29
SHD-205ENST00000600475 LAS1LQ9Y4W2 734 aaKnown RBP13.22□□□□□ -0.29
SHD-205ENST00000600475 KDM3BQ7LBC6 1761 aa13.22□□□□□ -0.29
SHD-205ENST00000600475 HMGB2P26583 209 aaKnown RBP13.21□□□□□ -0.29
SHD-205ENST00000600475 ATP6V1AP38606 617 aa13.21□□□□□ -0.29
SHD-205ENST00000600475 KCNQ4P56696 695 aa13.21□□□□□ -0.29
SHD-205ENST00000600475 ITPK1Q13572 414 aa13.21□□□□□ -0.29
SHD-205ENST00000600475 SPINK5Q9NQ38 1064 aaPredicted RBP13.21□□□□□ -0.29
SHD-205ENST00000600475 ZNF831Q5JPB2 1677 aa13.21□□□□□ -0.3
SHD-205ENST00000600475 GOLGA2Q08379 1002 aa13.2□□□□□ -0.3
SHD-205ENST00000600475 RREB1Q92766 1687 aa13.19□□□□□ -0.3
SHD-205ENST00000600475 GIGYF1O75420 1035 aaPredicted RBP13.19□□□□□ -0.3
SHD-205ENST00000600475 SNRPA1P09661 255 aaKnown RBP13.19□□□□□ -0.3
SHD-205ENST00000600475 DNAJC10Q8IXB1 793 aa13.19□□□□□ -0.3
SHD-205ENST00000600475 TEX13AQ9BXU3 409 aaPredicted RBP13.19□□□□□ -0.3
SHD-205ENST00000600475 CICQ96RK0 1608 aaPredicted RBP13.19□□□□□ -0.3
SHD-205ENST00000600475 ZBED9Q6R2W3 1325 aa13.18□□□□□ -0.3
SHD-205ENST00000600475 SLFN5Q08AF3 891 aa13.18□□□□□ -0.3
SHD-205ENST00000600475 TRMT2AQ8IZ69 625 aaKnown RBP13.18□□□□□ -0.3
SHD-205ENST00000600475 LINC00116Q8NCU8 138 aa13.18□□□□□ -0.3
SHD-205ENST00000600475 TSR2Q969E8 191 aaKnown RBP13.18□□□□□ -0.3
SHD-205ENST00000600475 FANCIQ9NVI1 1328 aa13.17□□□□□ -0.3
SHD-205ENST00000600475 E9PSI1 815 aa13.17□□□□□ -0.3
SHD-205ENST00000600475 CYP19A1P11511 503 aaPredicted RBP13.17□□□□□ -0.3
SHD-205ENST00000600475 KRT24Q2M2I5 525 aa13.17□□□□□ -0.3
SHD-205ENST00000600475 RC3H1Q5TC82 1133 aaKnown RBP13.17□□□□□ -0.3
SHD-205ENST00000600475 AKT1S1Q96B36 256 aa13.17□□□□□ -0.3
SHD-205ENST00000600475 CDCA7LQ96GN5 454 aa13.17□□□□□ -0.3
SHD-205ENST00000600475 MYH16Q9H6N6 1097 aa13.17□□□□□ -0.3
SHD-205ENST00000600475 USP16Q9Y5T5 823 aa13.17□□□□□ -0.3
SHD-205ENST00000600475 TAF1LQ8IZX4 1826 aa13.17□□□□□ -0.3
SHD-205ENST00000600475 TJP1Q07157 1748 aa13.16□□□□□ -0.3
SHD-205ENST00000600475 NUP188Q5SRE5 1749 aa13.16□□□□□ -0.3
SHD-205ENST00000600475 CNTNAP4Q9C0A0 1308 aa13.16□□□□□ -0.3
SHD-205ENST00000600475 PRAMEF22A3QJZ6 481 aa13.16□□□□□ -0.3
SHD-205ENST00000600475 STARD3NLO95772 234 aa13.16□□□□□ -0.3
SHD-205ENST00000600475 HOXB7P09629 217 aa13.16□□□□□ -0.3
SHD-205ENST00000600475 ANO8Q9HCE9 1232 aaPredicted RBP13.16□□□□□ -0.3
SHD-205ENST00000600475 MYH14Q7Z406 1995 aaKnown RBP13.15□□□□□ -0.3
SHD-205ENST00000600475 CRKLP46109 303 aaKnown RBP13.15□□□□□ -0.3
SHD-205ENST00000600475 ZNF827Q17R98 1081 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms