RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 WDR33Q9C0J8 1336 aaKnown RBP22.59■■□□□ 1.21
ARHGEF1-221ENST00000600387 ITSN1Q15811 1721 aa22.59■■□□□ 1.21
ARHGEF1-221ENST00000600387 SLC4A2P04920 1241 aa22.58■■□□□ 1.21
ARHGEF1-221ENST00000600387 CPS1P31327 1500 aa22.58■■□□□ 1.2
ARHGEF1-221ENST00000600387 WASLO00401 505 aaPredicted RBP22.57■■□□□ 1.2
ARHGEF1-221ENST00000600387 EPB41L2O43491 1005 aaKnown RBP22.57■■□□□ 1.2
ARHGEF1-221ENST00000600387 PALD1Q9ULE6 856 aa22.57■■□□□ 1.2
ARHGEF1-221ENST00000600387 HMGN5P82970 282 aaKnown RBP22.57■■□□□ 1.2
ARHGEF1-221ENST00000600387 PIBF1Q8WXW3 757 aa22.57■■□□□ 1.2
ARHGEF1-221ENST00000600387 CHMLP26374 656 aa22.56■■□□□ 1.2
ARHGEF1-221ENST00000600387 DNTTIP2Q5QJE6 756 aaKnown RBP22.56■■□□□ 1.2
ARHGEF1-221ENST00000600387 LRRCC1Q9C099 1032 aa22.56■■□□□ 1.2
ARHGEF1-221ENST00000600387 ANO2Q9NQ90 1003 aa22.56■■□□□ 1.2
ARHGEF1-221ENST00000600387 LETM1O95202 739 aaPredicted RBP22.56■■□□□ 1.2
ARHGEF1-221ENST00000600387 GNAI2P04899 355 aa22.56■■□□□ 1.2
ARHGEF1-221ENST00000600387 MX1P20591 662 aa22.56■■□□□ 1.2
ARHGEF1-221ENST00000600387 USP48Q86UV5 1035 aa22.56■■□□□ 1.2
ARHGEF1-221ENST00000600387 TMEM87AQ8NBN3 555 aa22.56■■□□□ 1.2
ARHGEF1-221ENST00000600387 STAG3Q9UJ98 1225 aa22.56■■□□□ 1.2
ARHGEF1-221ENST00000600387 SULT6B1Q6IMI4 303 aa22.55■■□□□ 1.2
ARHGEF1-221ENST00000600387 MCM10Q7L590 875 aa22.55■■□□□ 1.2
ARHGEF1-221ENST00000600387 CCDC94Q9BW85 323 aaPredicted RBP22.55■■□□□ 1.2
ARHGEF1-221ENST00000600387 SRCIN1Q9C0H9 1055 aa22.55■■□□□ 1.2
ARHGEF1-221ENST00000600387 GADD45BO75293 160 aaPredicted RBP22.54■■□□□ 1.2
ARHGEF1-221ENST00000600387 CCDC183Q5T5S1 534 aa22.54■■□□□ 1.2
ARHGEF1-221ENST00000600387 KLHL34Q8N239 644 aa22.54■■□□□ 1.2
ARHGEF1-221ENST00000600387 AEBP1Q8IUX7 1158 aa22.54■■□□□ 1.2
ARHGEF1-221ENST00000600387 EXOC6BQ9Y2D4 811 aa22.54■■□□□ 1.2
ARHGEF1-221ENST00000600387 EIF4A2Q14240 407 aaKnown RBP22.53■■□□□ 1.2
ARHGEF1-221ENST00000600387 SLC4A10Q6U841 1118 aa22.53■■□□□ 1.2
ARHGEF1-221ENST00000600387 CRB1P82279 1406 aa22.53■■□□□ 1.2
ARHGEF1-221ENST00000600387 GTF2F1P35269 517 aaKnown RBP eCLIP22.52■■□□□ 1.2
ARHGEF1-221ENST00000600387 NOLC1Q14978 699 aaKnown RBP eCLIP22.52■■□□□ 1.2
ARHGEF1-221ENST00000600387 NOL8Q76FK4 1167 aaKnown RBP22.52■■□□□ 1.2
ARHGEF1-221ENST00000600387 STAP2Q9UGK3 403 aa22.52■■□□□ 1.2
ARHGEF1-221ENST00000600387 TRIM6-TRIM34B2RNG4 842 aa22.52■■□□□ 1.2
ARHGEF1-221ENST00000600387 RILPL2Q969X0 211 aa22.52■■□□□ 1.2
ARHGEF1-221ENST00000600387 ARHGEF10O15013 1369 aa22.52■■□□□ 1.2
ARHGEF1-221ENST00000600387 PLEKHG5O94827 1062 aa22.51■■□□□ 1.19
ARHGEF1-221ENST00000600387 NUDT16Q96DE0 195 aaKnown RBP22.51■■□□□ 1.19
ARHGEF1-221ENST00000600387 GDPD2Q9HCC8 539 aa22.51■■□□□ 1.19
ARHGEF1-221ENST00000600387 RGPD1P0DJD0 1748 aa22.51■■□□□ 1.19
ARHGEF1-221ENST00000600387 AOX1Q06278 1338 aa22.5■■□□□ 1.19
ARHGEF1-221ENST00000600387 FBXO31Q5XUX0 539 aaPredicted RBP22.5■■□□□ 1.19
ARHGEF1-221ENST00000600387 TSHZ3Q63HK5 1081 aa22.5■■□□□ 1.19
ARHGEF1-221ENST00000600387 CCDC61Q9Y6R9 512 aa22.5■■□□□ 1.19
ARHGEF1-221ENST00000600387 RPAP1Q9BWH6 1393 aaPredicted RBP22.5■■□□□ 1.19
ARHGEF1-221ENST00000600387 GNAI3P08754 354 aa22.5■■□□□ 1.19
ARHGEF1-221ENST00000600387 USP25Q9UHP3 1055 aa22.5■■□□□ 1.19
ARHGEF1-221ENST00000600387 CACNA1FO60840 1977 aa22.49■■□□□ 1.19
ARHGEF1-221ENST00000600387 F6X3S4 739 aa22.49■■□□□ 1.19
ARHGEF1-221ENST00000600387 ADCY5O95622 1261 aa22.48■■□□□ 1.19
ARHGEF1-221ENST00000600387 G2E3Q7L622 706 aa22.48■■□□□ 1.19
ARHGEF1-221ENST00000600387 UPF3BQ9BZI7 483 aaKnown RBP22.48■■□□□ 1.19
ARHGEF1-221ENST00000600387 HSPA4P34932 840 aa22.48■■□□□ 1.19
ARHGEF1-221ENST00000600387 ATP8B2P98198 1209 aa22.48■■□□□ 1.19
ARHGEF1-221ENST00000600387 SPTLC3Q9NUV7 552 aa22.48■■□□□ 1.19
ARHGEF1-221ENST00000600387 FOXD4L6Q3SYB3 417 aaPredicted RBP22.47■■□□□ 1.19
ARHGEF1-221ENST00000600387 FOXD4L3Q6VB84 417 aaPredicted RBP22.47■■□□□ 1.19
ARHGEF1-221ENST00000600387 N4BP2Q86UW6 1770 aaPredicted RBP22.47■■□□□ 1.19
ARHGEF1-221ENST00000600387 UBE2HP62256 183 aa22.47■■□□□ 1.19
ARHGEF1-221ENST00000600387 A2ML1A8K2U0 1454 aa22.46■■□□□ 1.19
ARHGEF1-221ENST00000600387 XRN1Q8IZH2 1706 aaKnown RBP22.46■■□□□ 1.19
ARHGEF1-221ENST00000600387 FKBP5Q13451 457 aaPredicted RBP22.46■■□□□ 1.19
ARHGEF1-221ENST00000600387 SPATA31D1Q6ZQQ2 1576 aa22.45■■□□□ 1.18
ARHGEF1-221ENST00000600387 ZNF830Q96NB3 372 aaPredicted RBP22.45■■□□□ 1.18
ARHGEF1-221ENST00000600387 ZSCAN22P10073 491 aaPredicted RBP22.45■■□□□ 1.18
ARHGEF1-221ENST00000600387 ARID3AQ99856 593 aa22.45■■□□□ 1.18
ARHGEF1-221ENST00000600387 STK31Q9BXU1 1019 aa22.45■■□□□ 1.18
ARHGEF1-221ENST00000600387 TSPYL4Q9UJ04 414 aa22.45■■□□□ 1.18
ARHGEF1-221ENST00000600387 ATP6V1DQ9Y5K8 247 aa22.45■■□□□ 1.18
ARHGEF1-221ENST00000600387 KDM4AO75164 1064 aa22.44■■□□□ 1.18
ARHGEF1-221ENST00000600387 HCLS1P14317 486 aaPredicted RBP22.44■■□□□ 1.18
ARHGEF1-221ENST00000600387 PNMA6EA0A0J9YXQ4 647 aa22.43■■□□□ 1.18
ARHGEF1-221ENST00000600387 UTP14CQ5TAP6 766 aaKnown RBP22.43■■□□□ 1.18
ARHGEF1-221ENST00000600387 TTC12Q9H892 705 aaPredicted RBP22.43■■□□□ 1.18
ARHGEF1-221ENST00000600387 CNPY2Q9Y2B0 182 aa22.43■■□□□ 1.18
ARHGEF1-221ENST00000600387 FAM208AQ9UK61 1670 aaKnown RBP22.43■■□□□ 1.18
ARHGEF1-221ENST00000600387 TPM3P06753 285 aa22.43■■□□□ 1.18
ARHGEF1-221ENST00000600387 KIF3AQ9Y496 699 aa22.43■■□□□ 1.18
ARHGEF1-221ENST00000600387 NRXN3Q9Y4C0 1643 aa22.43■■□□□ 1.18
ARHGEF1-221ENST00000600387 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.42■■□□□ 1.18
ARHGEF1-221ENST00000600387 NALCNQ8IZF0 1738 aa22.42■■□□□ 1.18
ARHGEF1-221ENST00000600387 PEAK1Q9H792 1746 aa22.42■■□□□ 1.18
ARHGEF1-221ENST00000600387 TTC21BQ7Z4L5 1316 aa22.42■■□□□ 1.18
ARHGEF1-221ENST00000600387 UNC5CLQ8IV45 518 aa22.42■■□□□ 1.18
ARHGEF1-221ENST00000600387 ZNF710Q8N1W2 664 aa22.42■■□□□ 1.18
ARHGEF1-221ENST00000600387 RTF1Q92541 710 aaKnown RBP22.42■■□□□ 1.18
ARHGEF1-221ENST00000600387 SIRT1Q96EB6 747 aa22.41■■□□□ 1.18
ARHGEF1-221ENST00000600387 MIS18AQ9NYP9 233 aa22.41■■□□□ 1.18
ARHGEF1-221ENST00000600387 NCKAP5LQ9HCH0 1330 aa22.41■■□□□ 1.18
ARHGEF1-221ENST00000600387 STX6O43752 255 aa22.41■■□□□ 1.18
ARHGEF1-221ENST00000600387 RAD50Q92878 1312 aa22.4■■□□□ 1.18
ARHGEF1-221ENST00000600387 MPNDQ8N594 471 aa22.4■■□□□ 1.18
ARHGEF1-221ENST00000600387 DMTNQ08495 405 aa22.4■■□□□ 1.18
ARHGEF1-221ENST00000600387 TTC14Q96N46 770 aa22.4■■□□□ 1.18
ARHGEF1-221ENST00000600387 OVOS2A0A0J9YW53 1432 aa22.39■■□□□ 1.17
ARHGEF1-221ENST00000600387 F13A1P00488 732 aa22.39■■□□□ 1.17
ARHGEF1-221ENST00000600387 FLIIQ13045 1269 aa22.39■■□□□ 1.17
ARHGEF1-221ENST00000600387 OVOS2Q6IE36 1432 aa22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms