RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 NHSQ6T4R5 1651 aa21.88■■□□□ 1.09
USHBP1-210ENST00000600286 PLSCR1O15162 318 aa21.87■■□□□ 1.09
USHBP1-210ENST00000600286 SMARCC1Q92922 1105 aaPredicted RBP21.87■■□□□ 1.09
USHBP1-210ENST00000600286 PIGBQ92521 554 aa21.86■■□□□ 1.09
USHBP1-210ENST00000600286 CASZ1Q86V15 1759 aa21.85■■□□□ 1.09
USHBP1-210ENST00000600286 KAT6BQ8WYB5 2073 aa21.85■■□□□ 1.09
USHBP1-210ENST00000600286 HMGB2P26583 209 aaKnown RBP21.85■■□□□ 1.09
USHBP1-210ENST00000600286 DCTN1Q14203 1278 aa21.85■■□□□ 1.09
USHBP1-210ENST00000600286 SHANK3Q9BYB0 1731 aa21.85■■□□□ 1.09
USHBP1-210ENST00000600286 KDM6AO15550 1401 aaPredicted RBP21.84■■□□□ 1.09
USHBP1-210ENST00000600286 TAF7Q15545 349 aaPredicted RBP21.84■■□□□ 1.09
USHBP1-210ENST00000600286 CCDC27Q2M243 656 aa21.83■■□□□ 1.09
USHBP1-210ENST00000600286 PROM2Q8N271 834 aa21.83■■□□□ 1.09
USHBP1-210ENST00000600286 SALL2Q9Y467 1007 aaPredicted RBP21.83■■□□□ 1.09
USHBP1-210ENST00000600286 BTBD11A6QL63 1104 aa21.82■■□□□ 1.08
USHBP1-210ENST00000600286 TTC5Q8N0Z6 440 aa21.82■■□□□ 1.08
USHBP1-210ENST00000600286 TRIM35Q9UPQ4 493 aa21.82■■□□□ 1.08
USHBP1-210ENST00000600286 CEMIPQ8WUJ3 1361 aa21.82■■□□□ 1.08
USHBP1-210ENST00000600286 BTAF1O14981 1849 aa21.8■■□□□ 1.08
USHBP1-210ENST00000600286 PAPPAQ13219 1627 aa21.78■■□□□ 1.08
USHBP1-210ENST00000600286 SENP3-EIF4A1A0A087X0R7 540 aa21.78■■□□□ 1.08
USHBP1-210ENST00000600286 THUMPD2Q9BTF0 503 aaKnown RBP21.78■■□□□ 1.08
USHBP1-210ENST00000600286 BABAM1Q9NWV8 329 aa21.78■■□□□ 1.08
USHBP1-210ENST00000600286 LAS1LQ9Y4W2 734 aaKnown RBP21.78■■□□□ 1.08
USHBP1-210ENST00000600286 WWC1Q8IX03 1113 aa21.77■■□□□ 1.08
USHBP1-210ENST00000600286 ATG3Q9NT62 314 aa21.77■■□□□ 1.08
USHBP1-210ENST00000600286 ASAP1Q9ULH1 1129 aa21.77■■□□□ 1.08
USHBP1-210ENST00000600286 DOT1LQ8TEK3 1739 aa21.77■■□□□ 1.08
USHBP1-210ENST00000600286 WDR63Q8IWG1 891 aa21.76■■□□□ 1.07
USHBP1-210ENST00000600286 RBM42Q9BTD8 480 aaKnown RBP21.76■■□□□ 1.07
USHBP1-210ENST00000600286 ANO8Q9HCE9 1232 aaPredicted RBP21.76■■□□□ 1.07
USHBP1-210ENST00000600286 GNAI1P63096 354 aa21.75■■□□□ 1.07
USHBP1-210ENST00000600286 HNRNPUQ00839 825 aaKnown RBP eCLIP21.75■■□□□ 1.07
USHBP1-210ENST00000600286 SLC27A3Q5K4L6 730 aa21.75■■□□□ 1.07
USHBP1-210ENST00000600286 ZNF790Q6PG37 636 aa21.75■■□□□ 1.07
USHBP1-210ENST00000600286 TSPYL4Q9UJ04 414 aa21.75■■□□□ 1.07
USHBP1-210ENST00000600286 PALLDQ8WX93 1383 aa21.74■■□□□ 1.07
USHBP1-210ENST00000600286 SLC39A6Q13433 755 aa21.74■■□□□ 1.07
USHBP1-210ENST00000600286 NBPF14Q5TI25 921 aa21.74■■□□□ 1.07
USHBP1-210ENST00000600286 SCN11AQ9UI33 1791 aa21.74■■□□□ 1.07
USHBP1-210ENST00000600286 MRC1P22897 1456 aa21.73■■□□□ 1.07
USHBP1-210ENST00000600286 PTCD1O75127 700 aaKnown RBP21.73■■□□□ 1.07
USHBP1-210ENST00000600286 CFAP44Q96MT7 982 aa21.73■■□□□ 1.07
USHBP1-210ENST00000600286 IFT57Q9NWB7 429 aa21.73■■□□□ 1.07
USHBP1-210ENST00000600286 FMNL2Q96PY5 1086 aa21.72■■□□□ 1.07
USHBP1-210ENST00000600286 CCNL1Q9UK58 526 aaPredicted RBP21.72■■□□□ 1.07
USHBP1-210ENST00000600286 IL16Q14005 1332 aa21.72■■□□□ 1.07
USHBP1-210ENST00000600286 LOC102724428A0A0B4J2F2 783 aa21.71■■□□□ 1.07
USHBP1-210ENST00000600286 SIK1P57059 783 aa21.71■■□□□ 1.07
USHBP1-210ENST00000600286 TXNRD1Q16881 649 aa21.71■■□□□ 1.07
USHBP1-210ENST00000600286 MIS18AQ9NYP9 233 aa21.71■■□□□ 1.07
USHBP1-210ENST00000600286 ADAMTS7Q9UKP4 1686 aa21.7■■□□□ 1.06
USHBP1-210ENST00000600286 TOGARAM1Q9Y4F4 1720 aa21.7■■□□□ 1.06
USHBP1-210ENST00000600286 CHL1O00533 1208 aa21.7■■□□□ 1.06
USHBP1-210ENST00000600286 ATP6V1AP38606 617 aa21.7■■□□□ 1.06
USHBP1-210ENST00000600286 TEX13AQ9BXU3 409 aaPredicted RBP21.7■■□□□ 1.06
USHBP1-210ENST00000600286 DLG5Q8TDM6 1919 aa21.7■■□□□ 1.06
USHBP1-210ENST00000600286 MYH16Q9H6N6 1097 aa21.69■■□□□ 1.06
USHBP1-210ENST00000600286 LY75O60449 1722 aa21.69■■□□□ 1.06
USHBP1-210ENST00000600286 ITGB4P16144 1822 aa21.69■■□□□ 1.06
USHBP1-210ENST00000600286 GOLGA2Q08379 1002 aa21.68■■□□□ 1.06
USHBP1-210ENST00000600286 VSIG10Q8N0Z9 540 aa21.68■■□□□ 1.06
USHBP1-210ENST00000600286 QSER1Q2KHR3 1735 aa21.67■■□□□ 1.06
USHBP1-210ENST00000600286 PDGFDQ9GZP0 370 aaPredicted RBP21.67■■□□□ 1.06
USHBP1-210ENST00000600286 ZNF496Q96IT1 587 aaPredicted RBP21.66■■□□□ 1.06
USHBP1-210ENST00000600286 STARD3NLO95772 234 aa21.65■■□□□ 1.06
USHBP1-210ENST00000600286 SNRPA1P09661 255 aaKnown RBP21.65■■□□□ 1.06
USHBP1-210ENST00000600286 ZNF853P0CG23 659 aa21.65■■□□□ 1.06
USHBP1-210ENST00000600286 CHMP4AQ9BY43 222 aa21.65■■□□□ 1.06
USHBP1-210ENST00000600286 TUBGCP6Q96RT7 1819 aa21.64■■□□□ 1.06
USHBP1-210ENST00000600286 COL24A1Q17RW2 1714 aa21.64■■□□□ 1.06
USHBP1-210ENST00000600286 E9PSI1 815 aa21.64■■□□□ 1.05
USHBP1-210ENST00000600286 KCNQ3O43525 872 aa21.64■■□□□ 1.05
USHBP1-210ENST00000600286 EIF4A1P60842 406 aaKnown RBP21.64■■□□□ 1.05
USHBP1-210ENST00000600286 MBIPQ9NS73 344 aa21.64■■□□□ 1.05
USHBP1-210ENST00000600286 HEG1Q9ULI3 1381 aa21.62■■□□□ 1.05
USHBP1-210ENST00000600286 SPON1Q9HCB6 807 aa21.62■■□□□ 1.05
USHBP1-210ENST00000600286 STK32BQ9NY57 414 aa21.62■■□□□ 1.05
USHBP1-210ENST00000600286 ZNF521Q96K83 1311 aa21.61■■□□□ 1.05
USHBP1-210ENST00000600286 SLC15A2Q16348 729 aa21.61■■□□□ 1.05
USHBP1-210ENST00000600286 LRRC4BQ9NT99 713 aa21.61■■□□□ 1.05
USHBP1-210ENST00000600286 VIRMAQ69YN4 1812 aaKnown RBP21.6■■□□□ 1.05
USHBP1-210ENST00000600286 KCNQ4P56696 695 aa21.6■■□□□ 1.05
USHBP1-210ENST00000600286 NPM2Q86SE8 214 aaKnown RBP21.6■■□□□ 1.05
USHBP1-210ENST00000600286 DNAJC10Q8IXB1 793 aa21.6■■□□□ 1.05
USHBP1-210ENST00000600286 AK7Q96M32 723 aa21.6■■□□□ 1.05
USHBP1-210ENST00000600286 ZBED9Q6R2W3 1325 aa21.59■■□□□ 1.05
USHBP1-210ENST00000600286 GIGYF1O75420 1035 aaPredicted RBP21.58■■□□□ 1.05
USHBP1-210ENST00000600286 PTGER2P43116 358 aa21.58■■□□□ 1.05
USHBP1-210ENST00000600286 ITPK1Q13572 414 aa21.58■■□□□ 1.05
USHBP1-210ENST00000600286 RC3H1Q5TC82 1133 aaKnown RBP21.58■■□□□ 1.05
USHBP1-210ENST00000600286 TSR2Q969E8 191 aaKnown RBP21.58■■□□□ 1.05
USHBP1-210ENST00000600286 SLC4A9Q96Q91 983 aa21.58■■□□□ 1.05
USHBP1-210ENST00000600286 SIPA1L3O60292 1781 aaPredicted RBP21.58■■□□□ 1.04
USHBP1-210ENST00000600286 SOS1Q07889 1333 aaPredicted RBP21.57■■□□□ 1.04
USHBP1-210ENST00000600286 HOXB7P09629 217 aa21.57■■□□□ 1.04
USHBP1-210ENST00000600286 SGIP1Q9BQI5 828 aa21.57■■□□□ 1.04
USHBP1-210ENST00000600286 TFCP2L1Q9NZI6 479 aa21.57■■□□□ 1.04
USHBP1-210ENST00000600286 UTRNP46939 3433 aa21.57■■□□□ 1.04
USHBP1-210ENST00000600286 SLFN5Q08AF3 891 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms