RNA–Protein interactions for RNA: ENST00000600231.5

GRAMD1A-212, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 2,534 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-212ENST00000600231 AMOTQ4VCS5 1084 aa26.93■■□□□ 1.9
GRAMD1A-212ENST00000600231 APBB1O00213 710 aa26.92■■□□□ 1.9
GRAMD1A-212ENST00000600231 MED1Q15648 1581 aaPredicted RBP26.92■■□□□ 1.9
GRAMD1A-212ENST00000600231 GSPT1P15170 499 aaKnown RBP26.92■■□□□ 1.9
GRAMD1A-212ENST00000600231 DDX17Q92841 729 aaKnown RBP26.92■■□□□ 1.9
GRAMD1A-212ENST00000600231 NCAPD2Q15021 1401 aa26.92■■□□□ 1.9
GRAMD1A-212ENST00000600231 KCNQ3O43525 872 aa26.91■■□□□ 1.9
GRAMD1A-212ENST00000600231 ZC3H6P61129 1189 aaKnown RBP26.91■■□□□ 1.9
GRAMD1A-212ENST00000600231 TEFQ10587 303 aa26.91■■□□□ 1.9
GRAMD1A-212ENST00000600231 TBC1D9Q6ZT07 1266 aa26.91■■□□□ 1.9
GRAMD1A-212ENST00000600231 GNAI2P04899 355 aa26.91■■□□□ 1.9
GRAMD1A-212ENST00000600231 SLKQ9H2G2 1235 aaPredicted RBP26.91■■□□□ 1.9
GRAMD1A-212ENST00000600231 SMARCA5O60264 1052 aaPredicted RBP26.9■■□□□ 1.9
GRAMD1A-212ENST00000600231 HMMRO75330 724 aa26.9■■□□□ 1.9
GRAMD1A-212ENST00000600231 OTUD7AQ8TE49 926 aaPredicted RBP26.9■■□□□ 1.9
GRAMD1A-212ENST00000600231 PHAXQ9H814 394 aaKnown RBP26.9■■□□□ 1.9
GRAMD1A-212ENST00000600231 MST1RQ04912 1400 aa26.9■■□□□ 1.9
GRAMD1A-212ENST00000600231 EIF2S2P20042 333 aaKnown RBP26.9■■□□□ 1.9
GRAMD1A-212ENST00000600231 RBM25P49756 843 aaKnown RBP26.89■■□□□ 1.9
GRAMD1A-212ENST00000600231 PXDNQ92626 1479 aa26.89■■□□□ 1.9
GRAMD1A-212ENST00000600231 LMO7Q8WWI1 1683 aa26.89■■□□□ 1.9
GRAMD1A-212ENST00000600231 BTBD11A6QL63 1104 aa26.88■■□□□ 1.89
GRAMD1A-212ENST00000600231 C1orf141Q5JVX7 400 aa26.88■■□□□ 1.89
GRAMD1A-212ENST00000600231 STRCP1A6NGW2 1772 aa26.88■■□□□ 1.89
GRAMD1A-212ENST00000600231 RNMTO43148 476 aaKnown RBP26.87■■□□□ 1.89
GRAMD1A-212ENST00000600231 GNAI3P08754 354 aa26.87■■□□□ 1.89
GRAMD1A-212ENST00000600231 TTC22Q5TAA0 569 aa26.87■■□□□ 1.89
GRAMD1A-212ENST00000600231 ERBB3P21860 1342 aa26.86■■□□□ 1.89
GRAMD1A-212ENST00000600231 ALS2Q96Q42 1657 aa26.86■■□□□ 1.89
GRAMD1A-212ENST00000600231 RGPD5Q99666 1765 aa26.86■■□□□ 1.89
GRAMD1A-212ENST00000600231 KDM3BQ7LBC6 1761 aa26.86■■□□□ 1.89
GRAMD1A-212ENST00000600231 ANTXR1Q9H6X2 564 aa26.85■■□□□ 1.89
GRAMD1A-212ENST00000600231 CDC45O75419 566 aa26.85■■□□□ 1.89
GRAMD1A-212ENST00000600231 HSPA2P54652 639 aa26.85■■□□□ 1.89
GRAMD1A-212ENST00000600231 FRAT2O75474 233 aaPredicted RBP26.84■■□□□ 1.89
GRAMD1A-212ENST00000600231 HOXB7P09629 217 aa26.84■■□□□ 1.89
GRAMD1A-212ENST00000600231 USP44Q9H0E7 712 aa26.83■■□□□ 1.89
GRAMD1A-212ENST00000600231 CHPF2Q9P2E5 772 aa26.83■■□□□ 1.89
GRAMD1A-212ENST00000600231 DCCP43146 1447 aa26.82■■□□□ 1.88
GRAMD1A-212ENST00000600231 PNMA6EA0A0J9YXQ4 647 aa26.82■■□□□ 1.88
GRAMD1A-212ENST00000600231 EXOC6BQ9Y2D4 811 aa26.82■■□□□ 1.88
GRAMD1A-212ENST00000600231 CAMTA1Q9Y6Y1 1673 aa26.82■■□□□ 1.88
GRAMD1A-212ENST00000600231 PXDNLA1KZ92 1463 aa26.81■■□□□ 1.88
GRAMD1A-212ENST00000600231 SPRYD3Q8NCJ5 442 aa26.81■■□□□ 1.88
GRAMD1A-212ENST00000600231 LRRFIP2Q9Y608 721 aaKnown RBP26.81■■□□□ 1.88
GRAMD1A-212ENST00000600231 ATP8B2P98198 1209 aa26.8■■□□□ 1.88
GRAMD1A-212ENST00000600231 CADPS2Q86UW7 1296 aa26.8■■□□□ 1.88
GRAMD1A-212ENST00000600231 CABLES1Q8TDN4 633 aa26.8■■□□□ 1.88
GRAMD1A-212ENST00000600231 NCOA3Q9Y6Q9 1424 aa26.8■■□□□ 1.88
GRAMD1A-212ENST00000600231 ANXA1P04083 346 aa26.79■■□□□ 1.88
GRAMD1A-212ENST00000600231 KIF2CQ99661 725 aa26.79■■□□□ 1.88
GRAMD1A-212ENST00000600231 NPHP3Q7Z494 1330 aa26.78■■□□□ 1.88
GRAMD1A-212ENST00000600231 CHMP4AQ9BY43 222 aa26.78■■□□□ 1.88
GRAMD1A-212ENST00000600231 NLRP2Q9NX02 1062 aa26.78■■□□□ 1.88
GRAMD1A-212ENST00000600231 N4BP2Q86UW6 1770 aaPredicted RBP26.78■■□□□ 1.88
GRAMD1A-212ENST00000600231 UBTFL1P0CB47 393 aaPredicted RBP26.77■■□□□ 1.88
GRAMD1A-212ENST00000600231 SDSP20132 328 aa26.77■■□□□ 1.88
GRAMD1A-212ENST00000600231 OVOS2A0A0G2JMS6 1433 aa26.77■■□□□ 1.88
GRAMD1A-212ENST00000600231 SRCIN1Q9C0H9 1055 aa26.77■■□□□ 1.88
GRAMD1A-212ENST00000600231 PI4KAP2A4QPH2 592 aa26.76■■□□□ 1.87
GRAMD1A-212ENST00000600231 PI4KAP1Q8N8J0 262 aa26.76■■□□□ 1.87
GRAMD1A-212ENST00000600231 HSCBQ8IWL3 235 aa26.76■■□□□ 1.87
GRAMD1A-212ENST00000600231 GIGYF1O75420 1035 aaPredicted RBP26.75■■□□□ 1.87
GRAMD1A-212ENST00000600231 RAPGEF4Q8WZA2 1011 aa26.75■■□□□ 1.87
GRAMD1A-212ENST00000600231 DNAAF4Q8WXU2 420 aa26.74■■□□□ 1.87
GRAMD1A-212ENST00000600231 PDE1AP54750 535 aa26.73■■□□□ 1.87
GRAMD1A-212ENST00000600231 SNX21Q969T3 373 aa26.73■■□□□ 1.87
GRAMD1A-212ENST00000600231 LRRCC1Q9C099 1032 aa26.73■■□□□ 1.87
GRAMD1A-212ENST00000600231 DBF4Q9UBU7 674 aaPredicted RBP26.73■■□□□ 1.87
GRAMD1A-212ENST00000600231 PRAMEF22A3QJZ6 481 aa26.73■■□□□ 1.87
GRAMD1A-212ENST00000600231 BEND3Q5T5X7 828 aa26.73■■□□□ 1.87
GRAMD1A-212ENST00000600231 OSBPL3Q9H4L5 887 aa26.73■■□□□ 1.87
GRAMD1A-212ENST00000600231 HEG1Q9ULI3 1381 aa26.73■■□□□ 1.87
GRAMD1A-212ENST00000600231 CHRNA2Q15822 529 aa26.72■■□□□ 1.87
GRAMD1A-212ENST00000600231 IBTKQ9P2D0 1353 aaPredicted RBP26.71■■□□□ 1.87
GRAMD1A-212ENST00000600231 TNS3Q68CZ2 1445 aa26.71■■□□□ 1.87
GRAMD1A-212ENST00000600231 NBPF7P0C2Y1 421 aaPredicted RBP26.7■■□□□ 1.87
GRAMD1A-212ENST00000600231 ADCY9O60503 1353 aa26.7■■□□□ 1.86
GRAMD1A-212ENST00000600231 CSB-PGBD3P0DP91 1061 aa26.7■■□□□ 1.86
GRAMD1A-212ENST00000600231 PROSER3Q2NL68 480 aa26.7■■□□□ 1.86
GRAMD1A-212ENST00000600231 SPATA31A3Q5VYP0 1347 aa26.7■■□□□ 1.86
GRAMD1A-212ENST00000600231 COL18A1P39060 1754 aa26.69■■□□□ 1.86
GRAMD1A-212ENST00000600231 TATP17735 454 aaPredicted RBP26.69■■□□□ 1.86
GRAMD1A-212ENST00000600231 SSH3Q8TE77 659 aa26.69■■□□□ 1.86
GRAMD1A-212ENST00000600231 SALL3Q9BXA9 1300 aa26.69■■□□□ 1.86
GRAMD1A-212ENST00000600231 SIPA1L3O60292 1781 aaPredicted RBP26.68■■□□□ 1.86
GRAMD1A-212ENST00000600231 TSHZ3Q63HK5 1081 aa26.68■■□□□ 1.86
GRAMD1A-212ENST00000600231 RBM42Q9BTD8 480 aaKnown RBP26.68■■□□□ 1.86
GRAMD1A-212ENST00000600231 PPP1R42Q7Z4L9 355 aa26.68■■□□□ 1.86
GRAMD1A-212ENST00000600231 EIF5BO60841 1220 aaKnown RBP26.67■■□□□ 1.86
GRAMD1A-212ENST00000600231 ADAMTS7Q9UKP4 1686 aa26.67■■□□□ 1.86
GRAMD1A-212ENST00000600231 LMTK3Q96Q04 1460 aa26.66■■□□□ 1.86
GRAMD1A-212ENST00000600231 MEGF6O75095 1541 aa26.66■■□□□ 1.86
GRAMD1A-212ENST00000600231 PHKG2P15735 406 aa26.66■■□□□ 1.86
GRAMD1A-212ENST00000600231 CD2BP2O95400 341 aaKnown RBP26.66■■□□□ 1.86
GRAMD1A-212ENST00000600231 SLC39A6Q13433 755 aa26.66■■□□□ 1.86
GRAMD1A-212ENST00000600231 CASC1Q6TDU7 716 aa26.66■■□□□ 1.86
GRAMD1A-212ENST00000600231 USP26Q9BXU7 913 aa26.66■■□□□ 1.86
GRAMD1A-212ENST00000600231 SPG7Q9UQ90 795 aa26.66■■□□□ 1.86
GRAMD1A-212ENST00000600231 KDM6AO15550 1401 aaPredicted RBP26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms