RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 ERC2O15083 957 aa23.52■■□□□ 1.36
ARHGEF1-218ENST00000599589 NEK4P51957 841 aa23.52■■□□□ 1.36
ARHGEF1-218ENST00000599589 DNTTIP2Q5QJE6 756 aaKnown RBP23.52■■□□□ 1.36
ARHGEF1-218ENST00000599589 PTPRUQ92729 1446 aa23.52■■□□□ 1.35
ARHGEF1-218ENST00000599589 KIF24Q5T7B8 1368 aa23.51■■□□□ 1.35
ARHGEF1-218ENST00000599589 EMILIN1Q9Y6C2 1016 aa23.51■■□□□ 1.35
ARHGEF1-218ENST00000599589 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.51■■□□□ 1.35
ARHGEF1-218ENST00000599589 MPNDQ8N594 471 aa23.51■■□□□ 1.35
ARHGEF1-218ENST00000599589 CCDC94Q9BW85 323 aaPredicted RBP23.51■■□□□ 1.35
ARHGEF1-218ENST00000599589 BRD1O95696 1058 aa23.5■■□□□ 1.35
ARHGEF1-218ENST00000599589 CEP85Q6P2H3 762 aa23.5■■□□□ 1.35
ARHGEF1-218ENST00000599589 AMOTL2Q9Y2J4 779 aa23.5■■□□□ 1.35
ARHGEF1-218ENST00000599589 MAP2P11137 1827 aaKnown RBP23.5■■□□□ 1.35
ARHGEF1-218ENST00000599589 AKAP12Q02952 1782 aa23.5■■□□□ 1.35
ARHGEF1-218ENST00000599589 MYRIPQ8NFW9 859 aa23.5■■□□□ 1.35
ARHGEF1-218ENST00000599589 PLEKHG3A1L390 1219 aa23.49■■□□□ 1.35
ARHGEF1-218ENST00000599589 CDK12Q9NYV4 1490 aaPredicted RBP23.49■■□□□ 1.35
ARHGEF1-218ENST00000599589 ITSN1Q15811 1721 aa23.49■■□□□ 1.35
ARHGEF1-218ENST00000599589 RPAP2Q8IXW5 612 aaPredicted RBP23.48■■□□□ 1.35
ARHGEF1-218ENST00000599589 IL13P35225 146 aa23.48■■□□□ 1.35
ARHGEF1-218ENST00000599589 TSC1Q92574 1164 aa23.48■■□□□ 1.35
ARHGEF1-218ENST00000599589 DLG5Q8TDM6 1919 aa23.48■■□□□ 1.35
ARHGEF1-218ENST00000599589 FAM83GA6ND36 823 aa23.47■■□□□ 1.35
ARHGEF1-218ENST00000599589 ZNF830Q96NB3 372 aaPredicted RBP23.47■■□□□ 1.35
ARHGEF1-218ENST00000599589 FOXD4L6Q3SYB3 417 aaPredicted RBP23.47■■□□□ 1.35
ARHGEF1-218ENST00000599589 FOXD4L3Q6VB84 417 aaPredicted RBP23.47■■□□□ 1.35
ARHGEF1-218ENST00000599589 ACEP12821 1306 aa23.47■■□□□ 1.35
ARHGEF1-218ENST00000599589 SYAP1Q96A49 352 aaPredicted RBP23.46■■□□□ 1.35
ARHGEF1-218ENST00000599589 NOL8Q76FK4 1167 aaKnown RBP23.46■■□□□ 1.35
ARHGEF1-218ENST00000599589 TTC21BQ7Z4L5 1316 aa23.45■■□□□ 1.35
ARHGEF1-218ENST00000599589 DCTN1Q14203 1278 aa23.45■■□□□ 1.34
ARHGEF1-218ENST00000599589 ZHX1Q9UKY1 873 aaPredicted RBP23.45■■□□□ 1.34
ARHGEF1-218ENST00000599589 GADD45BO75293 160 aaPredicted RBP23.45■■□□□ 1.34
ARHGEF1-218ENST00000599589 GDPD2Q9HCC8 539 aa23.45■■□□□ 1.34
ARHGEF1-218ENST00000599589 NUTM2FA1L443 756 aa23.44■■□□□ 1.34
ARHGEF1-218ENST00000599589 MSH6P52701 1360 aa23.43■■□□□ 1.34
ARHGEF1-218ENST00000599589 CUL4AQ13619 759 aa23.43■■□□□ 1.34
ARHGEF1-218ENST00000599589 RRS1Q15050 365 aaKnown RBP23.43■■□□□ 1.34
ARHGEF1-218ENST00000599589 ZNF710Q8N1W2 664 aa23.43■■□□□ 1.34
ARHGEF1-218ENST00000599589 RTL1A6NKG5 1358 aa23.43■■□□□ 1.34
ARHGEF1-218ENST00000599589 DIP2AQ14689 1571 aa23.43■■□□□ 1.34
ARHGEF1-218ENST00000599589 PIBF1Q8WXW3 757 aa23.43■■□□□ 1.34
ARHGEF1-218ENST00000599589 TOPAZ1Q8N9V7 1692 aa23.43■■□□□ 1.34
ARHGEF1-218ENST00000599589 NOLC1Q14978 699 aaKnown RBP eCLIP23.42■■□□□ 1.34
ARHGEF1-218ENST00000599589 KRT24Q2M2I5 525 aa23.42■■□□□ 1.34
ARHGEF1-218ENST00000599589 MEIS3Q99687 375 aa23.42■■□□□ 1.34
ARHGEF1-218ENST00000599589 RGS12O14924 1447 aa23.42■■□□□ 1.34
ARHGEF1-218ENST00000599589 MCM2P49736 904 aa23.42■■□□□ 1.34
ARHGEF1-218ENST00000599589 LMOD3Q0VAK6 560 aa23.42■■□□□ 1.34
ARHGEF1-218ENST00000599589 PRIMPOLQ96LW4 560 aa23.42■■□□□ 1.34
ARHGEF1-218ENST00000599589 USP25Q9UHP3 1055 aa23.42■■□□□ 1.34
ARHGEF1-218ENST00000599589 C17orf53Q8N3J3 647 aaPredicted RBP23.41■■□□□ 1.34
ARHGEF1-218ENST00000599589 USP6P35125 1406 aa23.41■■□□□ 1.34
ARHGEF1-218ENST00000599589 PHF14O94880 888 aa23.41■■□□□ 1.34
ARHGEF1-218ENST00000599589 DMTNQ08495 405 aa23.41■■□□□ 1.34
ARHGEF1-218ENST00000599589 PALD1Q9ULE6 856 aa23.41■■□□□ 1.34
ARHGEF1-218ENST00000599589 USP48Q86UV5 1035 aa23.4■■□□□ 1.34
ARHGEF1-218ENST00000599589 TTC12Q9H892 705 aaPredicted RBP23.4■■□□□ 1.34
ARHGEF1-218ENST00000599589 ZSCAN20P17040 1043 aaPredicted RBP23.39■■□□□ 1.34
ARHGEF1-218ENST00000599589 PDE1AP54750 535 aa23.39■■□□□ 1.34
ARHGEF1-218ENST00000599589 TCHHQ07283 1943 aa23.39■■□□□ 1.33
ARHGEF1-218ENST00000599589 FAM177BA6PVY3 158 aa23.38■■□□□ 1.33
ARHGEF1-218ENST00000599589 HMGN5P82970 282 aaKnown RBP23.38■■□□□ 1.33
ARHGEF1-218ENST00000599589 TSHZ3Q63HK5 1081 aa23.38■■□□□ 1.33
ARHGEF1-218ENST00000599589 NRKQ7Z2Y5 1582 aa23.38■■□□□ 1.33
ARHGEF1-218ENST00000599589 UTP14CQ5TAP6 766 aaKnown RBP23.38■■□□□ 1.33
ARHGEF1-218ENST00000599589 INTS4Q96HW7 963 aaKnown RBP23.38■■□□□ 1.33
ARHGEF1-218ENST00000599589 UVSSAQ2YD98 709 aa23.37■■□□□ 1.33
ARHGEF1-218ENST00000599589 PODXL2Q9NZ53 605 aa23.37■■□□□ 1.33
ARHGEF1-218ENST00000599589 ADCY5O95622 1261 aa23.37■■□□□ 1.33
ARHGEF1-218ENST00000599589 GTF2F1P35269 517 aaKnown RBP eCLIP23.37■■□□□ 1.335e-7■■■■□ 22.6
ARHGEF1-218ENST00000599589 FAM184AQ8NB25 1140 aa23.37■■□□□ 1.33
ARHGEF1-218ENST00000599589 ESYT1Q9BSJ8 1104 aa23.37■■□□□ 1.33
ARHGEF1-218ENST00000599589 OVOS2A0A0J9YW53 1432 aa23.36■■□□□ 1.33
ARHGEF1-218ENST00000599589 OVOS2Q6IE36 1432 aa23.36■■□□□ 1.33
ARHGEF1-218ENST00000599589 CBX1P83916 185 aa23.36■■□□□ 1.33
ARHGEF1-218ENST00000599589 OSBPL3Q9H4L5 887 aa23.36■■□□□ 1.33
ARHGEF1-218ENST00000599589 TPRNQ4KMQ1 711 aa23.36■■□□□ 1.33
ARHGEF1-218ENST00000599589 MCCP23508 829 aa23.35■■□□□ 1.33
ARHGEF1-218ENST00000599589 SSH2Q76I76 1423 aa23.35■■□□□ 1.33
ARHGEF1-218ENST00000599589 TTC21AQ8NDW8 1320 aa23.34■■□□□ 1.33
ARHGEF1-218ENST00000599589 UPF3BQ9BZI7 483 aaKnown RBP23.33■■□□□ 1.33
ARHGEF1-218ENST00000599589 ANO2Q9NQ90 1003 aa23.33■■□□□ 1.33
ARHGEF1-218ENST00000599589 CEP170BQ9Y4F5 1589 aaPredicted RBP23.33■■□□□ 1.33
ARHGEF1-218ENST00000599589 HCLS1P14317 486 aaPredicted RBP23.33■■□□□ 1.33
ARHGEF1-218ENST00000599589 PPP4R3BQ5MIZ7 849 aa23.33■■□□□ 1.33
ARHGEF1-218ENST00000599589 KIF3AQ9Y496 699 aa23.33■■□□□ 1.33
ARHGEF1-218ENST00000599589 HMMRO75330 724 aa23.32■■□□□ 1.32
ARHGEF1-218ENST00000599589 USP31Q70CQ4 1352 aa23.32■■□□□ 1.32
ARHGEF1-218ENST00000599589 FKBP5Q13451 457 aaPredicted RBP23.32■■□□□ 1.32
ARHGEF1-218ENST00000599589 ATP2B3Q16720 1220 aa23.31■■□□□ 1.32
ARHGEF1-218ENST00000599589 CCDC183Q5T5S1 534 aa23.31■■□□□ 1.32
ARHGEF1-218ENST00000599589 NGDNQ8NEJ9 315 aaKnown RBP23.31■■□□□ 1.32
ARHGEF1-218ENST00000599589 XRN1Q8IZH2 1706 aaKnown RBP23.31■■□□□ 1.32
ARHGEF1-218ENST00000599589 WDR33Q9C0J8 1336 aaKnown RBP23.31■■□□□ 1.32
ARHGEF1-218ENST00000599589 EIF4A2Q14240 407 aaKnown RBP23.31■■□□□ 1.32
ARHGEF1-218ENST00000599589 SPTLC3Q9NUV7 552 aa23.31■■□□□ 1.32
ARHGEF1-218ENST00000599589 KCNA6P17658 529 aa23.3■■□□□ 1.32
ARHGEF1-218ENST00000599589 ANAPC15P60006 121 aa23.3■■□□□ 1.32
ARHGEF1-218ENST00000599589 EXOC6BQ9Y2D4 811 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms