RNA–Protein interactions for RNA: ENST00000599479.1

TMEM38A-203, Transcript of transmembrane protein 38A, humanhuman

TSL 3

Gene TMEM38A, Length 410 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-203ENST00000599479 ADAMTS7Q9UKP4 1686 aa16.24■□□□□ 0.19
TMEM38A-203ENST00000599479 SLC4A9Q96Q91 983 aa16.23■□□□□ 0.19
TMEM38A-203ENST00000599479 CEMIPQ8WUJ3 1361 aa16.23■□□□□ 0.19
TMEM38A-203ENST00000599479 HTATSF1O43719 755 aaKnown RBP16.22■□□□□ 0.19
TMEM38A-203ENST00000599479 PDGFDQ9GZP0 370 aaPredicted RBP16.22■□□□□ 0.19
TMEM38A-203ENST00000599479 PNNQ9H307 717 aaKnown RBP16.22■□□□□ 0.19
TMEM38A-203ENST00000599479 MAP3K5Q99683 1374 aa16.22■□□□□ 0.19
TMEM38A-203ENST00000599479 MRC1P22897 1456 aa16.22■□□□□ 0.19
TMEM38A-203ENST00000599479 ITPK1Q13572 414 aa16.2■□□□□ 0.18
TMEM38A-203ENST00000599479 SCN11AQ9UI33 1791 aa16.19■□□□□ 0.18
TMEM38A-203ENST00000599479 ATP6V1AP38606 617 aa16.18■□□□□ 0.18
TMEM38A-203ENST00000599479 LINC00116Q8NCU8 138 aa16.18■□□□□ 0.18
TMEM38A-203ENST00000599479 PNPLA7Q6ZV29 1317 aa16.18■□□□□ 0.18
TMEM38A-203ENST00000599479 TFCP2L1Q9NZI6 479 aa16.17■□□□□ 0.18
TMEM38A-203ENST00000599479 ADAMTS8Q9UP79 889 aa16.17■□□□□ 0.18
TMEM38A-203ENST00000599479 ZNF831Q5JPB2 1677 aa16.16■□□□□ 0.18
TMEM38A-203ENST00000599479 NFE2L2Q16236 605 aa16.16■□□□□ 0.18
TMEM38A-203ENST00000599479 RC3H1Q5TC82 1133 aaKnown RBP16.16■□□□□ 0.18
TMEM38A-203ENST00000599479 SLC16A10Q8TF71 515 aa16.16■□□□□ 0.18
TMEM38A-203ENST00000599479 PTCD1O75127 700 aaKnown RBP16.15■□□□□ 0.18
TMEM38A-203ENST00000599479 NEFMP07197 916 aa16.15■□□□□ 0.18
TMEM38A-203ENST00000599479 TEFQ10587 303 aa16.15■□□□□ 0.18
TMEM38A-203ENST00000599479 SLC39A6Q13433 755 aa16.15■□□□□ 0.18
TMEM38A-203ENST00000599479 CCDC184Q52MB2 194 aa16.15■□□□□ 0.18
TMEM38A-203ENST00000599479 SGIP1Q9BQI5 828 aa16.15■□□□□ 0.18
TMEM38A-203ENST00000599479 RBM42Q9BTD8 480 aaKnown RBP16.15■□□□□ 0.18
TMEM38A-203ENST00000599479 MTFR1LQ9H019 292 aa16.15■□□□□ 0.18
TMEM38A-203ENST00000599479 SPON1Q9HCB6 807 aa16.15■□□□□ 0.18
TMEM38A-203ENST00000599479 CASZ1Q86V15 1759 aa16.15■□□□□ 0.18
TMEM38A-203ENST00000599479 ANP32CO43423 234 aa16.14■□□□□ 0.17
TMEM38A-203ENST00000599479 PTGER2P43116 358 aa16.14■□□□□ 0.17
TMEM38A-203ENST00000599479 ZNF790Q6PG37 636 aa16.14■□□□□ 0.17
TMEM38A-203ENST00000599479 AMIGO3Q86WK7 504 aa16.14■□□□□ 0.17
TMEM38A-203ENST00000599479 COL23A1Q86Y22 540 aaPredicted RBP16.14■□□□□ 0.17
TMEM38A-203ENST00000599479 VSIG10Q8N0Z9 540 aa16.14■□□□□ 0.17
TMEM38A-203ENST00000599479 FLAD1Q8NFF5 587 aa16.14■□□□□ 0.17
TMEM38A-203ENST00000599479 RTF1Q92541 710 aaKnown RBP16.14■□□□□ 0.17
TMEM38A-203ENST00000599479 LRP5O75197 1615 aa16.13■□□□□ 0.17
TMEM38A-203ENST00000599479 DCTN1Q14203 1278 aa16.13■□□□□ 0.17
TMEM38A-203ENST00000599479 MCM10Q7L590 875 aa16.13■□□□□ 0.17
TMEM38A-203ENST00000599479 CNTNAP4Q9C0A0 1308 aa16.13■□□□□ 0.17
TMEM38A-203ENST00000599479 ZBTB7AO95365 584 aa16.12■□□□□ 0.17
TMEM38A-203ENST00000599479 TMPOP42166 694 aaKnown RBP16.12■□□□□ 0.17
TMEM38A-203ENST00000599479 WDR43Q15061 677 aaKnown RBP eCLIP16.12■□□□□ 0.17
TMEM38A-203ENST00000599479 RUNDC1Q96C34 613 aa16.12■□□□□ 0.17
TMEM38A-203ENST00000599479 MAPK8IP3Q9UPT6 1336 aa16.12■□□□□ 0.17
TMEM38A-203ENST00000599479 TAF1LQ8IZX4 1826 aa16.12■□□□□ 0.17
TMEM38A-203ENST00000599479 QSER1Q2KHR3 1735 aa16.11■□□□□ 0.17
TMEM38A-203ENST00000599479 KCPQ6ZWJ8 1503 aa16.11■□□□□ 0.17
TMEM38A-203ENST00000599479 SSFA2P28290 1259 aa16.11■□□□□ 0.17
TMEM38A-203ENST00000599479 TAF7Q15545 349 aaPredicted RBP16.11■□□□□ 0.17
TMEM38A-203ENST00000599479 PNISRQ8TF01 805 aaKnown RBP16.11■□□□□ 0.17
TMEM38A-203ENST00000599479 ZNF496Q96IT1 587 aaPredicted RBP16.11■□□□□ 0.17
TMEM38A-203ENST00000599479 AK7Q96M32 723 aa16.11■□□□□ 0.17
TMEM38A-203ENST00000599479 C5P01031 1676 aa16.11■□□□□ 0.17
TMEM38A-203ENST00000599479 C4BP0C0L5 1744 aa16.11■□□□□ 0.17
TMEM38A-203ENST00000599479 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.1■□□□□ 0.17
TMEM38A-203ENST00000599479 BTBD11A6QL63 1104 aa16.1■□□□□ 0.17
TMEM38A-203ENST00000599479 INTS5Q6P9B9 1019 aaKnown RBP16.1■□□□□ 0.17
TMEM38A-203ENST00000599479 CICQ96RK0 1608 aaPredicted RBP16.09■□□□□ 0.17
TMEM38A-203ENST00000599479 KCNQ3O43525 872 aa16.09■□□□□ 0.17
TMEM38A-203ENST00000599479 RPS6KA4O75676 772 aa16.09■□□□□ 0.17
TMEM38A-203ENST00000599479 CYP19A1P11511 503 aaPredicted RBP16.09■□□□□ 0.17
TMEM38A-203ENST00000599479 RIPK4P57078 832 aa16.09■□□□□ 0.17
TMEM38A-203ENST00000599479 DNAJC10Q8IXB1 793 aa16.09■□□□□ 0.17
TMEM38A-203ENST00000599479 ATF5Q9Y2D1 282 aaPredicted RBP16.09■□□□□ 0.17
TMEM38A-203ENST00000599479 GNPATO15228 680 aa16.08■□□□□ 0.16
TMEM38A-203ENST00000599479 ADRA2BP18089 450 aa16.08■□□□□ 0.16
TMEM38A-203ENST00000599479 CRKLP46109 303 aaKnown RBP16.08■□□□□ 0.16
TMEM38A-203ENST00000599479 CCDC146Q8IYE0 955 aa16.08■□□□□ 0.16
TMEM38A-203ENST00000599479 TTC5Q8N0Z6 440 aa16.08■□□□□ 0.16
TMEM38A-203ENST00000599479 HEG1Q9ULI3 1381 aa16.08■□□□□ 0.16
TMEM38A-203ENST00000599479 SIPA1L3O60292 1781 aaPredicted RBP16.08■□□□□ 0.16
TMEM38A-203ENST00000599479 SMIM5Q71RC9 77 aa16.07■□□□□ 0.16
TMEM38A-203ENST00000599479 TEX13AQ9BXU3 409 aaPredicted RBP16.07■□□□□ 0.16
TMEM38A-203ENST00000599479 TRIM35Q9UPQ4 493 aa16.07■□□□□ 0.16
TMEM38A-203ENST00000599479 RTCBQ9Y3I0 505 aaKnown RBP16.07■□□□□ 0.16
TMEM38A-203ENST00000599479 FMNL2Q96PY5 1086 aa16.06■□□□□ 0.16
TMEM38A-203ENST00000599479 THUMPD2Q9BTF0 503 aaKnown RBP16.06■□□□□ 0.16
TMEM38A-203ENST00000599479 BABAM1Q9NWV8 329 aa16.06■□□□□ 0.16
TMEM38A-203ENST00000599479 VIRMAQ69YN4 1812 aaKnown RBP16.05■□□□□ 0.16
TMEM38A-203ENST00000599479 LMOD3Q0VAK6 560 aa16.05■□□□□ 0.16
TMEM38A-203ENST00000599479 TRAPPC3LQ5T215 181 aa16.05■□□□□ 0.16
TMEM38A-203ENST00000599479 ARHGEF1Q92888 912 aaKnown RBP16.05■□□□□ 0.16
TMEM38A-203ENST00000599479 TUBGCP6Q96RT7 1819 aa16.05■□□□□ 0.16
TMEM38A-203ENST00000599479 UBR2Q8IWV8 1755 aa16.05■□□□□ 0.16
TMEM38A-203ENST00000599479 COL5A3P25940 1745 aaPredicted RBP16.05■□□□□ 0.16
TMEM38A-203ENST00000599479 COL24A1Q17RW2 1714 aa16.05■□□□□ 0.16
TMEM38A-203ENST00000599479 UBR3Q6ZT12 1888 aa16.04■□□□□ 0.16
TMEM38A-203ENST00000599479 STARD3NLO95772 234 aa16.04■□□□□ 0.16
TMEM38A-203ENST00000599479 MRS2Q9HD23 443 aa16.04■□□□□ 0.16
TMEM38A-203ENST00000599479 CCDC87Q9NVE4 849 aa16.04■□□□□ 0.16
TMEM38A-203ENST00000599479 MYH14Q7Z406 1995 aaKnown RBP16.04■□□□□ 0.16
TMEM38A-203ENST00000599479 TJP1Q07157 1748 aa16.03■□□□□ 0.16
TMEM38A-203ENST00000599479 APAF1O14727 1248 aa16.03■□□□□ 0.16
TMEM38A-203ENST00000599479 PHF14O94880 888 aa16.03■□□□□ 0.16
TMEM38A-203ENST00000599479 NCBP3Q53F19 620 aaKnown RBP16.03■□□□□ 0.16
TMEM38A-203ENST00000599479 MIS18AQ9NYP9 233 aa16.03■□□□□ 0.16
TMEM38A-203ENST00000599479 RRP7AQ9Y3A4 280 aaKnown RBP16.03■□□□□ 0.16
TMEM38A-203ENST00000599479 SOS1Q07889 1333 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms