RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 AMIGO3Q86WK7 504 aa6.59□□□□□ -1.35
HERC3-213ENST00000598772 GPR101Q96P66 508 aaPredicted RBP6.59□□□□□ -1.35
HERC3-213ENST00000598772 CUL9Q8IWT3 2517 aa6.59□□□□□ -1.35
HERC3-213ENST00000598772 KNDC1Q76NI1 1749 aa6.59□□□□□ -1.36
HERC3-213ENST00000598772 TNRC6CQ9HCJ0 1690 aaKnown RBP6.58□□□□□ -1.36
HERC3-213ENST00000598772 CICQ96RK0 1608 aaPredicted RBP6.58□□□□□ -1.36
HERC3-213ENST00000598772 LMNB1P20700 586 aa6.58□□□□□ -1.36
HERC3-213ENST00000598772 DCAF5Q96JK2 942 aa6.58□□□□□ -1.36
HERC3-213ENST00000598772 SLC4A1APQ9BWU0 796 aaKnown RBP6.58□□□□□ -1.36
HERC3-213ENST00000598772 PARP3Q9Y6F1 533 aa6.58□□□□□ -1.36
HERC3-213ENST00000598772 CCDC61Q9Y6R9 512 aa6.58□□□□□ -1.36
HERC3-213ENST00000598772 CASP8AP2Q9UKL3 1982 aa6.58□□□□□ -1.36
HERC3-213ENST00000598772 TRPM1Q7Z4N2 1603 aa6.58□□□□□ -1.36
HERC3-213ENST00000598772 KCNA3P22001 575 aa6.57□□□□□ -1.36
HERC3-213ENST00000598772 CHRNA5P30532 468 aa6.57□□□□□ -1.36
HERC3-213ENST00000598772 CYP4F22Q6NT55 531 aa6.57□□□□□ -1.36
HERC3-213ENST00000598772 ARHGEF25Q86VW2 580 aa6.57□□□□□ -1.36
HERC3-213ENST00000598772 SPNS2Q8IVW8 549 aa6.57□□□□□ -1.36
HERC3-213ENST00000598772 LTV1Q96GA3 475 aaPredicted RBP6.57□□□□□ -1.36
HERC3-213ENST00000598772 CAPNS2Q96L46 248 aa6.57□□□□□ -1.36
HERC3-213ENST00000598772 PKD1L3Q7Z443 1732 aa6.56□□□□□ -1.36
HERC3-213ENST00000598772 PIK3C2AO00443 1686 aa6.56□□□□□ -1.36
HERC3-213ENST00000598772 GNPATO15228 680 aa6.56□□□□□ -1.36
HERC3-213ENST00000598772 AOC2O75106 756 aa6.56□□□□□ -1.36
HERC3-213ENST00000598772 HMGB2P26583 209 aaKnown RBP6.56□□□□□ -1.36
HERC3-213ENST00000598772 FXR1P51114 621 aaKnown RBP eCLIP6.56□□□□□ -1.36
HERC3-213ENST00000598772 TMF1P82094 1093 aa6.56□□□□□ -1.36
HERC3-213ENST00000598772 COL18A1P39060 1754 aa6.56□□□□□ -1.36
HERC3-213ENST00000598772 POLR3AO14802 1390 aaPredicted RBP6.56□□□□□ -1.36
HERC3-213ENST00000598772 PLEKHG3A1L390 1219 aa6.55□□□□□ -1.36
HERC3-213ENST00000598772 RASSF10A6NK89 507 aa6.55□□□□□ -1.36
HERC3-213ENST00000598772 GALR2O43603 387 aaPredicted RBP6.55□□□□□ -1.36
HERC3-213ENST00000598772 DDNO94850 711 aaPredicted RBP6.55□□□□□ -1.36
HERC3-213ENST00000598772 ECE1P42892 770 aa6.55□□□□□ -1.36
HERC3-213ENST00000598772 SRPK2P78362 688 aaKnown RBP6.55□□□□□ -1.36
HERC3-213ENST00000598772 MPRIPQ6WCQ1 1025 aa6.55□□□□□ -1.36
HERC3-213ENST00000598772 MPNDQ8N594 471 aa6.55□□□□□ -1.36
HERC3-213ENST00000598772 KCNH5Q8NCM2 988 aa6.55□□□□□ -1.36
HERC3-213ENST00000598772 ANKRD36BQ8N2N9 1353 aa6.55□□□□□ -1.36
HERC3-213ENST00000598772 WNK3Q9BYP7 1800 aa6.55□□□□□ -1.36
HERC3-213ENST00000598772 RGPD5Q99666 1765 aa6.54□□□□□ -1.36
HERC3-213ENST00000598772 PASKQ96RG2 1323 aa6.54□□□□□ -1.36
HERC3-213ENST00000598772 PIK3C2GO75747 1445 aa6.54□□□□□ -1.36
HERC3-213ENST00000598772 ERFEQ4G0M1 354 aa6.54□□□□□ -1.36
HERC3-213ENST00000598772 LDHDQ86WU2 507 aa6.54□□□□□ -1.36
HERC3-213ENST00000598772 NLGN1Q8N2Q7 840 aa6.54□□□□□ -1.36
HERC3-213ENST00000598772 ANKRD24Q8TF21 1146 aa6.54□□□□□ -1.36
HERC3-213ENST00000598772 KDM2AQ9Y2K7 1162 aa6.54□□□□□ -1.36
HERC3-213ENST00000598772 ROCK1Q13464 1354 aa6.54□□□□□ -1.36
HERC3-213ENST00000598772 ITSN1Q15811 1721 aa6.53□□□□□ -1.36
HERC3-213ENST00000598772 ZC3H4Q9UPT8 1303 aaKnown RBP6.53□□□□□ -1.36
HERC3-213ENST00000598772 CPSF1Q10570 1443 aaKnown RBP6.53□□□□□ -1.36
HERC3-213ENST00000598772 ITGBL1O95965 494 aaPredicted RBP6.53□□□□□ -1.36
HERC3-213ENST00000598772 SSFA2P28290 1259 aa6.53□□□□□ -1.36
HERC3-213ENST00000598772 TRAPPC3LQ5T215 181 aa6.53□□□□□ -1.36
HERC3-213ENST00000598772 MAP1SQ66K74 1059 aaPredicted RBP6.53□□□□□ -1.36
HERC3-213ENST00000598772 CNTROBQ8N137 903 aa6.53□□□□□ -1.36
HERC3-213ENST00000598772 ZCRB1Q8TBF4 217 aaKnown RBP6.53□□□□□ -1.36
HERC3-213ENST00000598772 ABCC6O95255 1503 aa6.53□□□□□ -1.36
HERC3-213ENST00000598772 VIRMAQ69YN4 1812 aaKnown RBP6.53□□□□□ -1.36
HERC3-213ENST00000598772 PITPNM2Q9BZ72 1349 aa6.52□□□□□ -1.37
HERC3-213ENST00000598772 NBPF1Q3BBV0 1214 aa6.52□□□□□ -1.37
HERC3-213ENST00000598772 SPDYE1Q8NFV5 336 aaPredicted RBP6.52□□□□□ -1.37
HERC3-213ENST00000598772 PALLDQ8WX93 1383 aa6.52□□□□□ -1.37
HERC3-213ENST00000598772 SPATA31E1Q6ZUB1 1445 aa6.51□□□□□ -1.37
HERC3-213ENST00000598772 CA12O43570 354 aa6.51□□□□□ -1.37
HERC3-213ENST00000598772 RFC4P35249 363 aa6.51□□□□□ -1.37
HERC3-213ENST00000598772 LINC00116Q8NCU8 138 aa6.51□□□□□ -1.37
HERC3-213ENST00000598772 TAF1DQ9H5J8 278 aaPredicted RBP6.51□□□□□ -1.37
HERC3-213ENST00000598772 CABP2Q9NPB3 220 aa6.51□□□□□ -1.37
HERC3-213ENST00000598772 CABP1Q9NZU7 370 aa6.51□□□□□ -1.37
HERC3-213ENST00000598772 NSD2O96028 1365 aa6.51□□□□□ -1.37
HERC3-213ENST00000598772 SBF1O95248 1867 aa6.51□□□□□ -1.37
HERC3-213ENST00000598772 IQCA1LA6NCM1 817 aa6.5□□□□□ -1.37
HERC3-213ENST00000598772 SPDYE2BA6NHP3 402 aa6.5□□□□□ -1.37
HERC3-213ENST00000598772 SPDYE6P0CI01 402 aa6.5□□□□□ -1.37
HERC3-213ENST00000598772 MAP2K2P36507 400 aa6.5□□□□□ -1.37
HERC3-213ENST00000598772 FMR1Q06787 632 aaKnown RBP eCLIP6.5□□□□□ -1.37
HERC3-213ENST00000598772 SPDYE2Q495Y8 402 aa6.5□□□□□ -1.37
HERC3-213ENST00000598772 CIAPIN1Q6FI81 312 aa6.5□□□□□ -1.37
HERC3-213ENST00000598772 SMARCC1Q92922 1105 aaPredicted RBP6.5□□□□□ -1.37
HERC3-213ENST00000598772 LY75O60449 1722 aa6.5□□□□□ -1.37
HERC3-213ENST00000598772 NSD3Q9BZ95 1437 aa6.5□□□□□ -1.37
HERC3-213ENST00000598772 ATP6V1AP38606 617 aa6.49□□□□□ -1.37
HERC3-213ENST00000598772 COLQQ9Y215 455 aaPredicted RBP6.49□□□□□ -1.37
HERC3-213ENST00000598772 RTCBQ9Y3I0 505 aaKnown RBP6.49□□□□□ -1.37
HERC3-213ENST00000598772 C5P01031 1676 aa6.49□□□□□ -1.37
HERC3-213ENST00000598772 TTLL6Q8N841 843 aa6.48□□□□□ -1.37
HERC3-213ENST00000598772 ARHGEF1Q92888 912 aaKnown RBP6.48□□□□□ -1.37
HERC3-213ENST00000598772 DDX21Q9NR30 783 aaKnown RBP eCLIP6.48□□□□□ -1.37
HERC3-213ENST00000598772 USP54Q70EL1 1684 aa6.47□□□□□ -1.37
HERC3-213ENST00000598772 LOC102724428A0A0B4J2F2 783 aa6.47□□□□□ -1.37
HERC3-213ENST00000598772 LOC105371045A0A1W2PR82 267 aa6.47□□□□□ -1.37
HERC3-213ENST00000598772 NFKBIEO00221 500 aa6.47□□□□□ -1.37
HERC3-213ENST00000598772 GYS1P13807 737 aa6.47□□□□□ -1.37
HERC3-213ENST00000598772 SIK1P57059 783 aa6.47□□□□□ -1.37
HERC3-213ENST00000598772 BICDL1Q6ZP65 573 aa6.47□□□□□ -1.37
HERC3-213ENST00000598772 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.47□□□□□ -1.37
HERC3-213ENST00000598772 ZNF579Q8NAF0 562 aaKnown RBP6.47□□□□□ -1.37
HERC3-213ENST00000598772 ZNF622Q969S3 477 aaKnown RBP eCLIP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms