RNA–Protein interactions for RNA: ENST00000598502.5

TRPM4-209, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 1 (best)

Gene TRPM4, Length 3,695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-209ENST00000598502 ST18O60284 1047 aa18.9■□□□□ 0.62
TRPM4-209ENST00000598502 SIRT1Q96EB6 747 aa18.89■□□□□ 0.62
TRPM4-209ENST00000598502 GDPD2Q9HCC8 539 aa18.89■□□□□ 0.62
TRPM4-209ENST00000598502 ABCC4O15439 1325 aa18.89■□□□□ 0.61
TRPM4-209ENST00000598502 PLEKHG3A1L390 1219 aa18.89■□□□□ 0.61
TRPM4-209ENST00000598502 ZNF500O60304 480 aaPredicted RBP18.89■□□□□ 0.61
TRPM4-209ENST00000598502 MEIS3Q99687 375 aa18.89■□□□□ 0.61
TRPM4-209ENST00000598502 LMBRD1Q9NUN5 540 aa18.89■□□□□ 0.61
TRPM4-209ENST00000598502 CDC42BPGQ6DT37 1551 aa18.89■□□□□ 0.61
TRPM4-209ENST00000598502 CDK11BP21127 795 aaKnown RBP18.89■□□□□ 0.61
TRPM4-209ENST00000598502 TERF1P54274 439 aa18.88■□□□□ 0.61
TRPM4-209ENST00000598502 G2E3Q7L622 706 aa18.88■□□□□ 0.61
TRPM4-209ENST00000598502 ABTB2Q8N961 1025 aa18.88■□□□□ 0.61
TRPM4-209ENST00000598502 BMP2KLQ5H9B9 411 aa18.88■□□□□ 0.61
TRPM4-209ENST00000598502 OTUD7AQ8TE49 926 aaPredicted RBP18.88■□□□□ 0.61
TRPM4-209ENST00000598502 TTC12Q9H892 705 aaPredicted RBP18.88■□□□□ 0.61
TRPM4-209ENST00000598502 ZNF445P59923 1031 aa18.88■□□□□ 0.61
TRPM4-209ENST00000598502 LMOD2Q6P5Q4 547 aa18.88■□□□□ 0.61
TRPM4-209ENST00000598502 EYA1Q99502 592 aa18.88■□□□□ 0.61
TRPM4-209ENST00000598502 CHL1O00533 1208 aa18.87■□□□□ 0.61
TRPM4-209ENST00000598502 KCNA6P17658 529 aa18.87■□□□□ 0.61
TRPM4-209ENST00000598502 CHAF1AQ13111 956 aaPredicted RBP18.87■□□□□ 0.61
TRPM4-209ENST00000598502 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.87■□□□□ 0.61
TRPM4-209ENST00000598502 DDIT3P35638 169 aa18.87■□□□□ 0.61
TRPM4-209ENST00000598502 RABEP1Q15276 862 aa18.87■□□□□ 0.61
TRPM4-209ENST00000598502 CASC1Q6TDU7 716 aa18.87■□□□□ 0.61
TRPM4-209ENST00000598502 TMEM63CQ9P1W3 806 aa18.87■□□□□ 0.61
TRPM4-209ENST00000598502 USP6P35125 1406 aa18.86■□□□□ 0.61
TRPM4-209ENST00000598502 BRPF1P55201 1214 aaPredicted RBP18.86■□□□□ 0.61
TRPM4-209ENST00000598502 TSPY26PQ9H489 355 aa18.86■□□□□ 0.61
TRPM4-209ENST00000598502 USP25Q9UHP3 1055 aa18.86■□□□□ 0.61
TRPM4-209ENST00000598502 REREQ9P2R6 1566 aa18.86■□□□□ 0.61
TRPM4-209ENST00000598502 HS1BP3Q53T59 392 aa18.86■□□□□ 0.61
TRPM4-209ENST00000598502 THEMISQ8N1K5 641 aaPredicted RBP18.86■□□□□ 0.61
TRPM4-209ENST00000598502 SETD1AO15047 1707 aaKnown RBP18.86■□□□□ 0.61
TRPM4-209ENST00000598502 PTPRUQ92729 1446 aa18.85■□□□□ 0.61
TRPM4-209ENST00000598502 KIF2CQ99661 725 aa18.85■□□□□ 0.61
TRPM4-209ENST00000598502 GPT2Q8TD30 523 aa18.85■□□□□ 0.61
TRPM4-209ENST00000598502 NSFL1CQ9UNZ2 370 aaKnown RBP18.85■□□□□ 0.61
TRPM4-209ENST00000598502 LRSAM1Q6UWE0 723 aa18.85■□□□□ 0.61
TRPM4-209ENST00000598502 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.85■□□□□ 0.61
TRPM4-209ENST00000598502 KIF3AQ9Y496 699 aa18.84■□□□□ 0.61
TRPM4-209ENST00000598502 PTCH1Q13635 1447 aa18.84■□□□□ 0.61
TRPM4-209ENST00000598502 PLEKHG1Q9ULL1 1385 aa18.84■□□□□ 0.61
TRPM4-209ENST00000598502 FGD1P98174 961 aa18.84■□□□□ 0.61
TRPM4-209ENST00000598502 STK31Q9BXU1 1019 aa18.83■□□□□ 0.61
TRPM4-209ENST00000598502 CGNQ9P2M7 1197 aaKnown RBP18.83■□□□□ 0.61
TRPM4-209ENST00000598502 HAP1P54257 671 aaPredicted RBP18.83■□□□□ 0.6
TRPM4-209ENST00000598502 FKBP5Q13451 457 aaPredicted RBP18.83■□□□□ 0.6
TRPM4-209ENST00000598502 VIRMAQ69YN4 1812 aaKnown RBP18.83■□□□□ 0.6
TRPM4-209ENST00000598502 TECPR2O15040 1411 aa18.83■□□□□ 0.6
TRPM4-209ENST00000598502 NEK4P51957 841 aa18.82■□□□□ 0.6
TRPM4-209ENST00000598502 MSH6P52701 1360 aa18.82■□□□□ 0.6
TRPM4-209ENST00000598502 PDCL2Q8N4E4 241 aa18.82■□□□□ 0.6
TRPM4-209ENST00000598502 SPC24Q8NBT2 197 aa18.82■□□□□ 0.6
TRPM4-209ENST00000598502 SYAP1Q96A49 352 aaPredicted RBP18.82■□□□□ 0.6
TRPM4-209ENST00000598502 PDE4CQ08493 712 aa18.81■□□□□ 0.6
TRPM4-209ENST00000598502 DMTNQ08495 405 aa18.81■□□□□ 0.6
TRPM4-209ENST00000598502 TSHZ3Q63HK5 1081 aa18.81■□□□□ 0.6
TRPM4-209ENST00000598502 PLEKHM2Q8IWE5 1019 aa18.81■□□□□ 0.6
TRPM4-209ENST00000598502 TBX22Q9Y458 520 aa18.8■□□□□ 0.6
TRPM4-209ENST00000598502 GSPT1P15170 499 aaKnown RBP18.8■□□□□ 0.6
TRPM4-209ENST00000598502 CEP85Q6P2H3 762 aa18.8■□□□□ 0.6
TRPM4-209ENST00000598502 PIK3R4Q99570 1358 aa18.8■□□□□ 0.6
TRPM4-209ENST00000598502 DLG5Q8TDM6 1919 aa18.8■□□□□ 0.6
TRPM4-209ENST00000598502 EIF2S2P20042 333 aaKnown RBP18.8■□□□□ 0.6
TRPM4-209ENST00000598502 MCM5P33992 734 aa18.8■□□□□ 0.6
TRPM4-209ENST00000598502 HMGN5P82970 282 aaKnown RBP18.8■□□□□ 0.6
TRPM4-209ENST00000598502 NOLC1Q14978 699 aaKnown RBP eCLIP18.8■□□□□ 0.6
TRPM4-209ENST00000598502 EXOC6BQ9Y2D4 811 aa18.8■□□□□ 0.6
TRPM4-209ENST00000598502 VGLL3A8MV65 326 aa18.79■□□□□ 0.6
TRPM4-209ENST00000598502 INTS3Q68E01 1043 aaKnown RBP18.79■□□□□ 0.6
TRPM4-209ENST00000598502 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.79■□□□□ 0.6
TRPM4-209ENST00000598502 DCTPP1Q9H773 170 aa18.79■□□□□ 0.6
TRPM4-209ENST00000598502 ANKRD44Q8N8A2 993 aa18.79■□□□□ 0.6
TRPM4-209ENST00000598502 OVOS2A0A0J9YW53 1432 aa18.79■□□□□ 0.6
TRPM4-209ENST00000598502 OVOS2Q6IE36 1432 aa18.79■□□□□ 0.6
TRPM4-209ENST00000598502 FLT4P35916 1363 aa18.78■□□□□ 0.6
TRPM4-209ENST00000598502 ITSN1Q15811 1721 aa18.78■□□□□ 0.6
TRPM4-209ENST00000598502 MYRIPQ8NFW9 859 aa18.78■□□□□ 0.6
TRPM4-209ENST00000598502 MBD3O95983 291 aa18.77■□□□□ 0.6
TRPM4-209ENST00000598502 PDLIM2Q96JY6 352 aa18.77■□□□□ 0.6
TRPM4-209ENST00000598502 CHMP3Q9Y3E7 222 aa18.77■□□□□ 0.6
TRPM4-209ENST00000598502 KIF13AQ9H1H9 1805 aa18.77■□□□□ 0.6
TRPM4-209ENST00000598502 U2AF2P26368 475 aaKnown RBP eCLIP18.77■□□□□ 0.6
TRPM4-209ENST00000598502 DRC7Q8IY82 874 aa18.77■□□□□ 0.6
TRPM4-209ENST00000598502 TTC21AQ8NDW8 1320 aa18.77■□□□□ 0.6
TRPM4-209ENST00000598502 AK9Q5TCS8 1911 aa18.77■□□□□ 0.59
TRPM4-209ENST00000598502 ZSCAN20P17040 1043 aaPredicted RBP18.77■□□□□ 0.59
TRPM4-209ENST00000598502 ATP2B3Q16720 1220 aa18.76■□□□□ 0.59
TRPM4-209ENST00000598502 ESCO1Q5FWF5 840 aa18.76■□□□□ 0.59
TRPM4-209ENST00000598502 SETD1BQ9UPS6 1966 aaKnown RBP18.76■□□□□ 0.59
TRPM4-209ENST00000598502 CWC22Q9HCG8 908 aaKnown RBP18.76■□□□□ 0.59
TRPM4-209ENST00000598502 GNAT3A8MTJ3 354 aa18.76■□□□□ 0.59
TRPM4-209ENST00000598502 HOXC9P31274 260 aa18.76■□□□□ 0.59
TRPM4-209ENST00000598502 UBR1Q8IWV7 1749 aa18.75■□□□□ 0.59
TRPM4-209ENST00000598502 RPAP2Q8IXW5 612 aaPredicted RBP18.75■□□□□ 0.59
TRPM4-209ENST00000598502 SBNO1A3KN83 1393 aa18.75■□□□□ 0.59
TRPM4-209ENST00000598502 ADCY5O95622 1261 aa18.75■□□□□ 0.59
TRPM4-209ENST00000598502 PSME1Q06323 249 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms