RNA–Protein interactions for RNA: ENST00000598352.1

C19orf54-208, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 1 (best)

Gene C19orf54, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-208ENST00000598352 TFCP2L1Q9NZI6 479 aa16.67■□□□□ 0.26
C19orf54-208ENST00000598352 FCHSD2O94868 740 aa16.66■□□□□ 0.26
C19orf54-208ENST00000598352 AMIGO3Q86WK7 504 aa16.66■□□□□ 0.26
C19orf54-208ENST00000598352 LINC00116Q8NCU8 138 aa16.66■□□□□ 0.26
C19orf54-208ENST00000598352 SLC52A2Q9HAB3 445 aa16.66■□□□□ 0.26
C19orf54-208ENST00000598352 ATF5Q9Y2D1 282 aaPredicted RBP16.66■□□□□ 0.26
C19orf54-208ENST00000598352 IL17REQ8NFR9 667 aa16.65■□□□□ 0.26
C19orf54-208ENST00000598352 MTFR1LQ9H019 292 aa16.65■□□□□ 0.26
C19orf54-208ENST00000598352 MRC1P22897 1456 aa16.65■□□□□ 0.26
C19orf54-208ENST00000598352 ADAMTS7Q9UKP4 1686 aa16.65■□□□□ 0.26
C19orf54-208ENST00000598352 COL23A1Q86Y22 540 aaPredicted RBP16.64■□□□□ 0.25
C19orf54-208ENST00000598352 GAS2L2Q8NHY3 880 aa16.64■□□□□ 0.25
C19orf54-208ENST00000598352 SCN11AQ9UI33 1791 aa16.64■□□□□ 0.25
C19orf54-208ENST00000598352 TAF1LQ8IZX4 1826 aa16.63■□□□□ 0.25
C19orf54-208ENST00000598352 QSER1Q2KHR3 1735 aa16.63■□□□□ 0.25
C19orf54-208ENST00000598352 HMGB2P26583 209 aaKnown RBP16.63■□□□□ 0.25
C19orf54-208ENST00000598352 ATP6V1AP38606 617 aa16.63■□□□□ 0.25
C19orf54-208ENST00000598352 SLC16A10Q8TF71 515 aa16.63■□□□□ 0.25
C19orf54-208ENST00000598352 TUBGCP6Q96RT7 1819 aa16.63■□□□□ 0.25
C19orf54-208ENST00000598352 MAP3K5Q99683 1374 aa16.63■□□□□ 0.25
C19orf54-208ENST00000598352 C5P01031 1676 aa16.62■□□□□ 0.25
C19orf54-208ENST00000598352 GNAT3A8MTJ3 354 aa16.62■□□□□ 0.25
C19orf54-208ENST00000598352 SMIM5Q71RC9 77 aa16.62■□□□□ 0.25
C19orf54-208ENST00000598352 PLEKHF1Q96S99 279 aa16.61■□□□□ 0.25
C19orf54-208ENST00000598352 RBM42Q9BTD8 480 aaKnown RBP16.61■□□□□ 0.25
C19orf54-208ENST00000598352 MYBBP1AQ9BQG0 1328 aaKnown RBP16.61■□□□□ 0.25
C19orf54-208ENST00000598352 C4BP0C0L5 1744 aa16.61■□□□□ 0.25
C19orf54-208ENST00000598352 CEMIPQ8WUJ3 1361 aa16.61■□□□□ 0.25
C19orf54-208ENST00000598352 PTCD1O75127 700 aaKnown RBP16.6■□□□□ 0.25
C19orf54-208ENST00000598352 PRKRIP1Q9H875 184 aaPredicted RBP16.6■□□□□ 0.25
C19orf54-208ENST00000598352 SLC39A6Q13433 755 aa16.59■□□□□ 0.25
C19orf54-208ENST00000598352 RC3H1Q5TC82 1133 aaKnown RBP16.59■□□□□ 0.25
C19orf54-208ENST00000598352 AK7Q96M32 723 aa16.59■□□□□ 0.25
C19orf54-208ENST00000598352 ZNF831Q5JPB2 1677 aa16.59■□□□□ 0.25
C19orf54-208ENST00000598352 ZNF316A6NFI3 1004 aaPredicted RBP16.58■□□□□ 0.24
C19orf54-208ENST00000598352 FLAD1Q8NFF5 587 aa16.58■□□□□ 0.24
C19orf54-208ENST00000598352 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.57■□□□□ 0.24
C19orf54-208ENST00000598352 SSFA2P28290 1259 aa16.57■□□□□ 0.24
C19orf54-208ENST00000598352 PPP1R1BQ9UD71 204 aaPredicted RBP16.57■□□□□ 0.24
C19orf54-208ENST00000598352 COL24A1Q17RW2 1714 aa16.56■□□□□ 0.24
C19orf54-208ENST00000598352 CNTNAP4Q9C0A0 1308 aa16.56■□□□□ 0.24
C19orf54-208ENST00000598352 GNPATO15228 680 aa16.56■□□□□ 0.24
C19orf54-208ENST00000598352 UBR3Q6ZT12 1888 aa16.56■□□□□ 0.24
C19orf54-208ENST00000598352 KCPQ6ZWJ8 1503 aa16.55■□□□□ 0.24
C19orf54-208ENST00000598352 ARXQ96QS3 562 aa16.55■□□□□ 0.24
C19orf54-208ENST00000598352 MSH5O43196 834 aa16.54■□□□□ 0.24
C19orf54-208ENST00000598352 HTATSF1O43719 755 aaKnown RBP16.54■□□□□ 0.24
C19orf54-208ENST00000598352 RPS6KA4O75676 772 aa16.54■□□□□ 0.24
C19orf54-208ENST00000598352 PHF14O94880 888 aa16.54■□□□□ 0.24
C19orf54-208ENST00000598352 CRKLP46109 303 aaKnown RBP16.54■□□□□ 0.24
C19orf54-208ENST00000598352 TEFQ10587 303 aa16.54■□□□□ 0.24
C19orf54-208ENST00000598352 INTS5Q6P9B9 1019 aaKnown RBP16.54■□□□□ 0.24
C19orf54-208ENST00000598352 MCM10Q7L590 875 aa16.54■□□□□ 0.24
C19orf54-208ENST00000598352 DNAJC10Q8IXB1 793 aa16.54■□□□□ 0.24
C19orf54-208ENST00000598352 MYH14Q7Z406 1995 aaKnown RBP16.53■□□□□ 0.24
C19orf54-208ENST00000598352 DCTN1Q14203 1278 aa16.53■□□□□ 0.24
C19orf54-208ENST00000598352 MSL1Q68DK7 614 aa16.53■□□□□ 0.24
C19orf54-208ENST00000598352 VIRMAQ69YN4 1812 aaKnown RBP16.53■□□□□ 0.24
C19orf54-208ENST00000598352 CICQ96RK0 1608 aaPredicted RBP16.52■□□□□ 0.24
C19orf54-208ENST00000598352 KCNQ3O43525 872 aa16.52■□□□□ 0.24
C19orf54-208ENST00000598352 CYP19A1P11511 503 aaPredicted RBP16.52■□□□□ 0.24
C19orf54-208ENST00000598352 NFE2L2Q16236 605 aa16.52■□□□□ 0.24
C19orf54-208ENST00000598352 ZNF790Q6PG37 636 aa16.52■□□□□ 0.24
C19orf54-208ENST00000598352 VSIG10Q8N0Z9 540 aa16.52■□□□□ 0.24
C19orf54-208ENST00000598352 ZNF496Q96IT1 587 aaPredicted RBP16.52■□□□□ 0.24
C19orf54-208ENST00000598352 FHDC1Q9C0D6 1143 aaPredicted RBP16.52■□□□□ 0.24
C19orf54-208ENST00000598352 RTCBQ9Y3I0 505 aaKnown RBP16.52■□□□□ 0.24
C19orf54-208ENST00000598352 COL5A3P25940 1745 aaPredicted RBP16.52■□□□□ 0.24
C19orf54-208ENST00000598352 SIPA1L3O60292 1781 aaPredicted RBP16.51■□□□□ 0.23
C19orf54-208ENST00000598352 TJP1Q07157 1748 aa16.51■□□□□ 0.23
C19orf54-208ENST00000598352 POLD1P28340 1107 aa16.51■□□□□ 0.23
C19orf54-208ENST00000598352 ARHGEF1Q92888 912 aaKnown RBP16.51■□□□□ 0.23
C19orf54-208ENST00000598352 SYT17Q9BSW7 474 aa16.51■□□□□ 0.23
C19orf54-208ENST00000598352 ADRA2BP18089 450 aa16.5■□□□□ 0.23
C19orf54-208ENST00000598352 TRAPPC3LQ5T215 181 aa16.5■□□□□ 0.23
C19orf54-208ENST00000598352 RTF1Q92541 710 aaKnown RBP16.5■□□□□ 0.23
C19orf54-208ENST00000598352 PNNQ9H307 717 aaKnown RBP16.5■□□□□ 0.23
C19orf54-208ENST00000598352 UBR2Q8IWV8 1755 aa16.49■□□□□ 0.23
C19orf54-208ENST00000598352 CCDC87Q9NVE4 849 aa16.49■□□□□ 0.23
C19orf54-208ENST00000598352 BTBD11A6QL63 1104 aa16.48■□□□□ 0.23
C19orf54-208ENST00000598352 TTC5Q8N0Z6 440 aa16.48■□□□□ 0.23
C19orf54-208ENST00000598352 ADAMTS8Q9UP79 889 aa16.48■□□□□ 0.23
C19orf54-208ENST00000598352 HEG1Q9ULI3 1381 aa16.48■□□□□ 0.23
C19orf54-208ENST00000598352 NEFMP07197 916 aa16.47■□□□□ 0.23
C19orf54-208ENST00000598352 TAF7Q15545 349 aaPredicted RBP16.47■□□□□ 0.23
C19orf54-208ENST00000598352 THUMPD2Q9BTF0 503 aaKnown RBP16.47■□□□□ 0.23
C19orf54-208ENST00000598352 SOS1Q07889 1333 aaPredicted RBP16.46■□□□□ 0.23
C19orf54-208ENST00000598352 GYS1P13807 737 aa16.46■□□□□ 0.23
C19orf54-208ENST00000598352 TMPOP42166 694 aaKnown RBP16.46■□□□□ 0.23
C19orf54-208ENST00000598352 CCDC184Q52MB2 194 aa16.46■□□□□ 0.23
C19orf54-208ENST00000598352 FMNL2Q96PY5 1086 aa16.46■□□□□ 0.23
C19orf54-208ENST00000598352 MAPK8IP3Q9UPT6 1336 aa16.45■□□□□ 0.22
C19orf54-208ENST00000598352 CCDC146Q8IYE0 955 aa16.45■□□□□ 0.22
C19orf54-208ENST00000598352 SRP68Q9UHB9 627 aaKnown RBP16.45■□□□□ 0.22
C19orf54-208ENST00000598352 ZBTB1Q9Y2K1 713 aa16.45■□□□□ 0.22
C19orf54-208ENST00000598352 RFC4P35249 363 aa16.44■□□□□ 0.22
C19orf54-208ENST00000598352 WDR43Q15061 677 aaKnown RBP eCLIP16.44■□□□□ 0.22
C19orf54-208ENST00000598352 MIS18AQ9NYP9 233 aa16.44■□□□□ 0.22
C19orf54-208ENST00000598352 DLG5Q8TDM6 1919 aa16.43■□□□□ 0.22
C19orf54-208ENST00000598352 PRAMEF22A3QJZ6 481 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms