RNA–Protein interactions for RNA: ENST00000598329.2

SYMPK-210, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 1,000 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-210ENST00000598329 GNAT3A8MTJ3 354 aa16.73■□□□□ 0.27
SYMPK-210ENST00000598329 IL17REQ8NFR9 667 aa16.73■□□□□ 0.27
SYMPK-210ENST00000598329 MAP3K5Q99683 1374 aa16.73■□□□□ 0.27
SYMPK-210ENST00000598329 SCN11AQ9UI33 1791 aa16.72■□□□□ 0.27
SYMPK-210ENST00000598329 LRP5O75197 1615 aa16.72■□□□□ 0.27
SYMPK-210ENST00000598329 HTATSF1O43719 755 aaKnown RBP16.72■□□□□ 0.27
SYMPK-210ENST00000598329 KCNQ4P56696 695 aa16.72■□□□□ 0.27
SYMPK-210ENST00000598329 ZNF831Q5JPB2 1677 aa16.72■□□□□ 0.27
SYMPK-210ENST00000598329 SLC4A9Q96Q91 983 aa16.71■□□□□ 0.27
SYMPK-210ENST00000598329 PNNQ9H307 717 aaKnown RBP16.71■□□□□ 0.27
SYMPK-210ENST00000598329 CASZ1Q86V15 1759 aa16.71■□□□□ 0.27
SYMPK-210ENST00000598329 PDGFDQ9GZP0 370 aaPredicted RBP16.7■□□□□ 0.26
SYMPK-210ENST00000598329 ITPK1Q13572 414 aa16.69■□□□□ 0.26
SYMPK-210ENST00000598329 SLC16A10Q8TF71 515 aa16.69■□□□□ 0.26
SYMPK-210ENST00000598329 PNPLA7Q6ZV29 1317 aa16.69■□□□□ 0.26
SYMPK-210ENST00000598329 QSER1Q2KHR3 1735 aa16.68■□□□□ 0.26
SYMPK-210ENST00000598329 ATP6V1AP38606 617 aa16.67■□□□□ 0.26
SYMPK-210ENST00000598329 RC3H1Q5TC82 1133 aaKnown RBP16.67■□□□□ 0.26
SYMPK-210ENST00000598329 LINC00116Q8NCU8 138 aa16.67■□□□□ 0.26
SYMPK-210ENST00000598329 SPON1Q9HCB6 807 aa16.67■□□□□ 0.26
SYMPK-210ENST00000598329 TAF1LQ8IZX4 1826 aa16.66■□□□□ 0.26
SYMPK-210ENST00000598329 FLAD1Q8NFF5 587 aa16.66■□□□□ 0.26
SYMPK-210ENST00000598329 SGIP1Q9BQI5 828 aa16.66■□□□□ 0.26
SYMPK-210ENST00000598329 MTFR1LQ9H019 292 aa16.66■□□□□ 0.26
SYMPK-210ENST00000598329 TFCP2L1Q9NZI6 479 aa16.66■□□□□ 0.26
SYMPK-210ENST00000598329 CICQ96RK0 1608 aaPredicted RBP16.66■□□□□ 0.26
SYMPK-210ENST00000598329 C5P01031 1676 aa16.65■□□□□ 0.26
SYMPK-210ENST00000598329 PTGER2P43116 358 aa16.65■□□□□ 0.26
SYMPK-210ENST00000598329 NFE2L2Q16236 605 aa16.65■□□□□ 0.26
SYMPK-210ENST00000598329 VSIG10Q8N0Z9 540 aa16.65■□□□□ 0.26
SYMPK-210ENST00000598329 C4BP0C0L5 1744 aa16.64■□□□□ 0.25
SYMPK-210ENST00000598329 CNTNAP4Q9C0A0 1308 aa16.64■□□□□ 0.25
SYMPK-210ENST00000598329 NEFMP07197 916 aa16.63■□□□□ 0.25
SYMPK-210ENST00000598329 SSFA2P28290 1259 aa16.63■□□□□ 0.25
SYMPK-210ENST00000598329 TEFQ10587 303 aa16.63■□□□□ 0.25
SYMPK-210ENST00000598329 AMIGO3Q86WK7 504 aa16.63■□□□□ 0.25
SYMPK-210ENST00000598329 COL23A1Q86Y22 540 aaPredicted RBP16.63■□□□□ 0.25
SYMPK-210ENST00000598329 KCPQ6ZWJ8 1503 aa16.63■□□□□ 0.25
SYMPK-210ENST00000598329 PTCD1O75127 700 aaKnown RBP16.62■□□□□ 0.25
SYMPK-210ENST00000598329 SLC39A6Q13433 755 aa16.62■□□□□ 0.25
SYMPK-210ENST00000598329 ZNF790Q6PG37 636 aa16.62■□□□□ 0.25
SYMPK-210ENST00000598329 RTF1Q92541 710 aaKnown RBP16.62■□□□□ 0.25
SYMPK-210ENST00000598329 RBM42Q9BTD8 480 aaKnown RBP16.62■□□□□ 0.25
SYMPK-210ENST00000598329 ADAMTS8Q9UP79 889 aa16.62■□□□□ 0.25
SYMPK-210ENST00000598329 SIPA1L3O60292 1781 aaPredicted RBP16.61■□□□□ 0.25
SYMPK-210ENST00000598329 AK7Q96M32 723 aa16.61■□□□□ 0.25
SYMPK-210ENST00000598329 COL24A1Q17RW2 1714 aa16.61■□□□□ 0.25
SYMPK-210ENST00000598329 ZBTB7AO95365 584 aa16.6■□□□□ 0.25
SYMPK-210ENST00000598329 MCM10Q7L590 875 aa16.6■□□□□ 0.25
SYMPK-210ENST00000598329 RUNDC1Q96C34 613 aa16.6■□□□□ 0.25
SYMPK-210ENST00000598329 VIRMAQ69YN4 1812 aaKnown RBP16.6■□□□□ 0.25
SYMPK-210ENST00000598329 TUBGCP6Q96RT7 1819 aa16.6■□□□□ 0.25
SYMPK-210ENST00000598329 UBR2Q8IWV8 1755 aa16.59■□□□□ 0.25
SYMPK-210ENST00000598329 ANP32CO43423 234 aa16.59■□□□□ 0.25
SYMPK-210ENST00000598329 RPS6KA4O75676 772 aa16.59■□□□□ 0.25
SYMPK-210ENST00000598329 ADRA2BP18089 450 aa16.59■□□□□ 0.25
SYMPK-210ENST00000598329 TMPOP42166 694 aaKnown RBP16.59■□□□□ 0.25
SYMPK-210ENST00000598329 WDR43Q15061 677 aaKnown RBP eCLIP16.59■□□□□ 0.253e-6■■■■□ 21.3
SYMPK-210ENST00000598329 MAPK8IP3Q9UPT6 1336 aa16.59■□□□□ 0.25
SYMPK-210ENST00000598329 COL5A3P25940 1745 aaPredicted RBP16.59■□□□□ 0.25
SYMPK-210ENST00000598329 UBR3Q6ZT12 1888 aa16.59■□□□□ 0.25
SYMPK-210ENST00000598329 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.58■□□□□ 0.24
SYMPK-210ENST00000598329 BTBD11A6QL63 1104 aa16.58■□□□□ 0.24
SYMPK-210ENST00000598329 CYP19A1P11511 503 aaPredicted RBP16.58■□□□□ 0.24
SYMPK-210ENST00000598329 DCTN1Q14203 1278 aa16.58■□□□□ 0.24
SYMPK-210ENST00000598329 TAF7Q15545 349 aaPredicted RBP16.58■□□□□ 0.24
SYMPK-210ENST00000598329 INTS5Q6P9B9 1019 aaKnown RBP16.58■□□□□ 0.24
SYMPK-210ENST00000598329 ZNF496Q96IT1 587 aaPredicted RBP16.58■□□□□ 0.24
SYMPK-210ENST00000598329 HEG1Q9ULI3 1381 aa16.57■□□□□ 0.24
SYMPK-210ENST00000598329 CRKLP46109 303 aaKnown RBP16.57■□□□□ 0.24
SYMPK-210ENST00000598329 CCDC184Q52MB2 194 aa16.57■□□□□ 0.24
SYMPK-210ENST00000598329 PNISRQ8TF01 805 aaKnown RBP16.57■□□□□ 0.24
SYMPK-210ENST00000598329 TEX13AQ9BXU3 409 aaPredicted RBP16.57■□□□□ 0.24
SYMPK-210ENST00000598329 ATF5Q9Y2D1 282 aaPredicted RBP16.57■□□□□ 0.24
SYMPK-210ENST00000598329 GNPATO15228 680 aa16.56■□□□□ 0.24
SYMPK-210ENST00000598329 DNAJC10Q8IXB1 793 aa16.56■□□□□ 0.24
SYMPK-210ENST00000598329 TTC5Q8N0Z6 440 aa16.56■□□□□ 0.24
SYMPK-210ENST00000598329 BABAM1Q9NWV8 329 aa16.56■□□□□ 0.24
SYMPK-210ENST00000598329 RTCBQ9Y3I0 505 aaKnown RBP16.56■□□□□ 0.24
SYMPK-210ENST00000598329 MYH14Q7Z406 1995 aaKnown RBP16.56■□□□□ 0.24
SYMPK-210ENST00000598329 TJP1Q07157 1748 aa16.56■□□□□ 0.24
SYMPK-210ENST00000598329 RIPK4P57078 832 aa16.55■□□□□ 0.24
SYMPK-210ENST00000598329 FMNL2Q96PY5 1086 aa16.55■□□□□ 0.24
SYMPK-210ENST00000598329 KCNQ3O43525 872 aa16.54■□□□□ 0.24
SYMPK-210ENST00000598329 LMOD3Q0VAK6 560 aa16.54■□□□□ 0.24
SYMPK-210ENST00000598329 TRAPPC3LQ5T215 181 aa16.54■□□□□ 0.24
SYMPK-210ENST00000598329 ARHGEF1Q92888 912 aaKnown RBP16.54■□□□□ 0.24
SYMPK-210ENST00000598329 CCDC87Q9NVE4 849 aa16.54■□□□□ 0.24
SYMPK-210ENST00000598329 TRIM35Q9UPQ4 493 aa16.54■□□□□ 0.24
SYMPK-210ENST00000598329 DLG5Q8TDM6 1919 aa16.53■□□□□ 0.24
SYMPK-210ENST00000598329 NCBP3Q53F19 620 aaKnown RBP16.53■□□□□ 0.24
SYMPK-210ENST00000598329 SMIM5Q71RC9 77 aa16.53■□□□□ 0.24
SYMPK-210ENST00000598329 STARD3NLO95772 234 aa16.52■□□□□ 0.24
SYMPK-210ENST00000598329 CCDC146Q8IYE0 955 aa16.52■□□□□ 0.24
SYMPK-210ENST00000598329 ARXQ96QS3 562 aa16.52■□□□□ 0.24
SYMPK-210ENST00000598329 SOS1Q07889 1333 aaPredicted RBP16.51■□□□□ 0.23
SYMPK-210ENST00000598329 PHF14O94880 888 aa16.5■□□□□ 0.23
SYMPK-210ENST00000598329 SNRPA1P09661 255 aaKnown RBP16.5■□□□□ 0.23
SYMPK-210ENST00000598329 POLD1P28340 1107 aa16.5■□□□□ 0.23
SYMPK-210ENST00000598329 EIF5P55010 431 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms