RNA–Protein interactions for RNA: ENST00000597756.1

NOTCH3-204, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-204ENST00000597756 QSER1Q2KHR3 1735 aa16.73■□□□□ 0.27
NOTCH3-204ENST00000597756 ZNF827Q17R98 1081 aa16.73■□□□□ 0.27
NOTCH3-204ENST00000597756 SLC52A2Q9HAB3 445 aa16.73■□□□□ 0.27
NOTCH3-204ENST00000597756 STK32BQ9NY57 414 aa16.73■□□□□ 0.27
NOTCH3-204ENST00000597756 CASZ1Q86V15 1759 aa16.73■□□□□ 0.27
NOTCH3-204ENST00000597756 DLG5Q8TDM6 1919 aa16.72■□□□□ 0.27
NOTCH3-204ENST00000597756 LOC102724428A0A0B4J2F2 783 aa16.72■□□□□ 0.27
NOTCH3-204ENST00000597756 SIK1P57059 783 aa16.72■□□□□ 0.27
NOTCH3-204ENST00000597756 SLC4A9Q96Q91 983 aa16.72■□□□□ 0.27
NOTCH3-204ENST00000597756 CEMIPQ8WUJ3 1361 aa16.72■□□□□ 0.27
NOTCH3-204ENST00000597756 MAP3K5Q99683 1374 aa16.72■□□□□ 0.27
NOTCH3-204ENST00000597756 C5P01031 1676 aa16.72■□□□□ 0.27
NOTCH3-204ENST00000597756 SIPA1L3O60292 1781 aaPredicted RBP16.72■□□□□ 0.27
NOTCH3-204ENST00000597756 HMGB2P26583 209 aaKnown RBP16.71■□□□□ 0.27
NOTCH3-204ENST00000597756 TUBGCP6Q96RT7 1819 aa16.7■□□□□ 0.26
NOTCH3-204ENST00000597756 PDGFDQ9GZP0 370 aaPredicted RBP16.7■□□□□ 0.26
NOTCH3-204ENST00000597756 HTATSF1O43719 755 aaKnown RBP16.69■□□□□ 0.26
NOTCH3-204ENST00000597756 PNNQ9H307 717 aaKnown RBP16.69■□□□□ 0.26
NOTCH3-204ENST00000597756 LRP5O75197 1615 aa16.68■□□□□ 0.26
NOTCH3-204ENST00000597756 ITPK1Q13572 414 aa16.68■□□□□ 0.26
NOTCH3-204ENST00000597756 CICQ96RK0 1608 aaPredicted RBP16.67■□□□□ 0.26
NOTCH3-204ENST00000597756 MYH14Q7Z406 1995 aaKnown RBP16.67■□□□□ 0.26
NOTCH3-204ENST00000597756 C4BP0C0L5 1744 aa16.67■□□□□ 0.26
NOTCH3-204ENST00000597756 ATP6V1AP38606 617 aa16.66■□□□□ 0.26
NOTCH3-204ENST00000597756 NFE2L2Q16236 605 aa16.66■□□□□ 0.26
NOTCH3-204ENST00000597756 CCDC184Q52MB2 194 aa16.66■□□□□ 0.26
NOTCH3-204ENST00000597756 UBR3Q6ZT12 1888 aa16.66■□□□□ 0.26
NOTCH3-204ENST00000597756 LINC00116Q8NCU8 138 aa16.66■□□□□ 0.26
NOTCH3-204ENST00000597756 ADAMTS8Q9UP79 889 aa16.66■□□□□ 0.26
NOTCH3-204ENST00000597756 UBR2Q8IWV8 1755 aa16.66■□□□□ 0.26
NOTCH3-204ENST00000597756 PNPLA7Q6ZV29 1317 aa16.66■□□□□ 0.26
NOTCH3-204ENST00000597756 COL5A3P25940 1745 aaPredicted RBP16.65■□□□□ 0.26
NOTCH3-204ENST00000597756 COL24A1Q17RW2 1714 aa16.65■□□□□ 0.26
NOTCH3-204ENST00000597756 TEFQ10587 303 aa16.64■□□□□ 0.25
NOTCH3-204ENST00000597756 SLC39A6Q13433 755 aa16.64■□□□□ 0.25
NOTCH3-204ENST00000597756 RC3H1Q5TC82 1133 aaKnown RBP16.64■□□□□ 0.25
NOTCH3-204ENST00000597756 RBM42Q9BTD8 480 aaKnown RBP16.64■□□□□ 0.25
NOTCH3-204ENST00000597756 TFCP2L1Q9NZI6 479 aa16.64■□□□□ 0.25
NOTCH3-204ENST00000597756 KCPQ6ZWJ8 1503 aa16.64■□□□□ 0.25
NOTCH3-204ENST00000597756 TJP1Q07157 1748 aa16.63■□□□□ 0.25
NOTCH3-204ENST00000597756 ANP32CO43423 234 aa16.63■□□□□ 0.25
NOTCH3-204ENST00000597756 PTCD1O75127 700 aaKnown RBP16.63■□□□□ 0.25
NOTCH3-204ENST00000597756 NEFMP07197 916 aa16.63■□□□□ 0.25
NOTCH3-204ENST00000597756 MCM10Q7L590 875 aa16.63■□□□□ 0.25
NOTCH3-204ENST00000597756 SLC16A10Q8TF71 515 aa16.63■□□□□ 0.25
NOTCH3-204ENST00000597756 DCTN1Q14203 1278 aa16.62■□□□□ 0.25
NOTCH3-204ENST00000597756 WDR43Q15061 677 aaKnown RBP eCLIP16.62■□□□□ 0.25
NOTCH3-204ENST00000597756 ZNF790Q6PG37 636 aa16.62■□□□□ 0.25
NOTCH3-204ENST00000597756 AMIGO3Q86WK7 504 aa16.62■□□□□ 0.25
NOTCH3-204ENST00000597756 RTF1Q92541 710 aaKnown RBP16.62■□□□□ 0.25
NOTCH3-204ENST00000597756 TMPOP42166 694 aaKnown RBP16.61■□□□□ 0.25
NOTCH3-204ENST00000597756 COL23A1Q86Y22 540 aaPredicted RBP16.61■□□□□ 0.25
NOTCH3-204ENST00000597756 VSIG10Q8N0Z9 540 aa16.61■□□□□ 0.25
NOTCH3-204ENST00000597756 FLAD1Q8NFF5 587 aa16.61■□□□□ 0.25
NOTCH3-204ENST00000597756 RUNDC1Q96C34 613 aa16.61■□□□□ 0.25
NOTCH3-204ENST00000597756 SGIP1Q9BQI5 828 aa16.61■□□□□ 0.25
NOTCH3-204ENST00000597756 SPON1Q9HCB6 807 aa16.61■□□□□ 0.25
NOTCH3-204ENST00000597756 MAPK8IP3Q9UPT6 1336 aa16.61■□□□□ 0.25
NOTCH3-204ENST00000597756 PTGER2P43116 358 aa16.6■□□□□ 0.25
NOTCH3-204ENST00000597756 PNISRQ8TF01 805 aaKnown RBP16.6■□□□□ 0.25
NOTCH3-204ENST00000597756 MTFR1LQ9H019 292 aa16.6■□□□□ 0.25
NOTCH3-204ENST00000597756 CNTNAP4Q9C0A0 1308 aa16.6■□□□□ 0.25
NOTCH3-204ENST00000597756 KCNQ3O43525 872 aa16.59■□□□□ 0.25
NOTCH3-204ENST00000597756 ZBTB7AO95365 584 aa16.59■□□□□ 0.25
NOTCH3-204ENST00000597756 TAF7Q15545 349 aaPredicted RBP16.59■□□□□ 0.25
NOTCH3-204ENST00000597756 ZNF496Q96IT1 587 aaPredicted RBP16.59■□□□□ 0.25
NOTCH3-204ENST00000597756 BTBD11A6QL63 1104 aa16.58■□□□□ 0.24
NOTCH3-204ENST00000597756 SSFA2P28290 1259 aa16.58■□□□□ 0.24
NOTCH3-204ENST00000597756 RIPK4P57078 832 aa16.58■□□□□ 0.24
NOTCH3-204ENST00000597756 DNAJC10Q8IXB1 793 aa16.58■□□□□ 0.24
NOTCH3-204ENST00000597756 CCDC146Q8IYE0 955 aa16.58■□□□□ 0.24
NOTCH3-204ENST00000597756 AK7Q96M32 723 aa16.58■□□□□ 0.24
NOTCH3-204ENST00000597756 RPS6KA4O75676 772 aa16.57■□□□□ 0.24
NOTCH3-204ENST00000597756 CYP19A1P11511 503 aaPredicted RBP16.57■□□□□ 0.24
NOTCH3-204ENST00000597756 INTS5Q6P9B9 1019 aaKnown RBP16.57■□□□□ 0.24
NOTCH3-204ENST00000597756 ATF5Q9Y2D1 282 aaPredicted RBP16.57■□□□□ 0.24
NOTCH3-204ENST00000597756 HEG1Q9ULI3 1381 aa16.56■□□□□ 0.24
NOTCH3-204ENST00000597756 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.56■□□□□ 0.24
NOTCH3-204ENST00000597756 CRKLP46109 303 aaKnown RBP16.56■□□□□ 0.24
NOTCH3-204ENST00000597756 SMIM5Q71RC9 77 aa16.56■□□□□ 0.24
NOTCH3-204ENST00000597756 TTC5Q8N0Z6 440 aa16.56■□□□□ 0.24
NOTCH3-204ENST00000597756 TRIM35Q9UPQ4 493 aa16.56■□□□□ 0.24
NOTCH3-204ENST00000597756 KDM3BQ7LBC6 1761 aa16.56■□□□□ 0.24
NOTCH3-204ENST00000597756 GNPATO15228 680 aa16.55■□□□□ 0.24
NOTCH3-204ENST00000597756 THUMPD2Q9BTF0 503 aaKnown RBP16.55■□□□□ 0.24
NOTCH3-204ENST00000597756 ADRA2BP18089 450 aa16.54■□□□□ 0.24
NOTCH3-204ENST00000597756 FMNL2Q96PY5 1086 aa16.54■□□□□ 0.24
NOTCH3-204ENST00000597756 TEX13AQ9BXU3 409 aaPredicted RBP16.54■□□□□ 0.24
NOTCH3-204ENST00000597756 MRS2Q9HD23 443 aa16.54■□□□□ 0.24
NOTCH3-204ENST00000597756 RTCBQ9Y3I0 505 aaKnown RBP16.54■□□□□ 0.24
NOTCH3-204ENST00000597756 BABAM1Q9NWV8 329 aa16.53■□□□□ 0.24
NOTCH3-204ENST00000597756 MIS18AQ9NYP9 233 aa16.53■□□□□ 0.24
NOTCH3-204ENST00000597756 RRP7AQ9Y3A4 280 aaKnown RBP16.53■□□□□ 0.24
NOTCH3-204ENST00000597756 APAF1O14727 1248 aa16.52■□□□□ 0.24
NOTCH3-204ENST00000597756 LMOD3Q0VAK6 560 aa16.52■□□□□ 0.24
NOTCH3-204ENST00000597756 TRAPPC3LQ5T215 181 aa16.52■□□□□ 0.24
NOTCH3-204ENST00000597756 ARHGEF1Q92888 912 aaKnown RBP16.52■□□□□ 0.24
NOTCH3-204ENST00000597756 CCDC87Q9NVE4 849 aa16.52■□□□□ 0.24
NOTCH3-204ENST00000597756 PHF14O94880 888 aa16.51■□□□□ 0.23
NOTCH3-204ENST00000597756 NEUROD2Q15784 382 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms