RNA–Protein interactions for RNA: ENST00000597360.5

PDE4C-211, Transcript of phosphodiesterase 4C, humanhuman

TSL 2

Gene PDE4C, Length 3,511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-211ENST00000597360 NRBP1Q9UHY1 535 aa18.44■□□□□ 0.54
PDE4C-211ENST00000597360 ABCC11Q96J66 1382 aa18.43■□□□□ 0.54
PDE4C-211ENST00000597360 KCNF1Q9H3M0 494 aa18.43■□□□□ 0.54
PDE4C-211ENST00000597360 ATP6V1DQ9Y5K8 247 aa18.43■□□□□ 0.54
PDE4C-211ENST00000597360 HMMRO75330 724 aa18.43■□□□□ 0.54
PDE4C-211ENST00000597360 SYTL4Q96C24 671 aaPredicted RBP18.43■□□□□ 0.54
PDE4C-211ENST00000597360 CTNNA3Q9UI47 895 aa18.43■□□□□ 0.54
PDE4C-211ENST00000597360 ATP10AO60312 1499 aa18.42■□□□□ 0.54
PDE4C-211ENST00000597360 RNF17Q9BXT8 1623 aaKnown RBP18.42■□□□□ 0.54
PDE4C-211ENST00000597360 GOLGA6L19H0YKK7 550 aa18.42■□□□□ 0.54
PDE4C-211ENST00000597360 UBE2HP62256 183 aa18.42■□□□□ 0.54
PDE4C-211ENST00000597360 DNM1Q05193 864 aaKnown RBP18.42■□□□□ 0.54
PDE4C-211ENST00000597360 CEP135Q66GS9 1140 aa18.42■□□□□ 0.54
PDE4C-211ENST00000597360 MRPL50Q8N5N7 158 aaKnown RBP18.42■□□□□ 0.54
PDE4C-211ENST00000597360 NOL10Q9BSC4 688 aaKnown RBP18.42■□□□□ 0.54
PDE4C-211ENST00000597360 SPTLC3Q9NUV7 552 aa18.42■□□□□ 0.54
PDE4C-211ENST00000597360 SMTNL1A8MU46 457 aa18.41■□□□□ 0.54
PDE4C-211ENST00000597360 TERF2Q15554 542 aa18.41■□□□□ 0.54
PDE4C-211ENST00000597360 ELF2Q15723 593 aa18.41■□□□□ 0.54
PDE4C-211ENST00000597360 TAF7LQ5H9L4 462 aa18.41■□□□□ 0.54
PDE4C-211ENST00000597360 DCTPP1Q9H773 170 aa18.41■□□□□ 0.54
PDE4C-211ENST00000597360 VAMP4O75379 141 aa18.41■□□□□ 0.54
PDE4C-211ENST00000597360 BICD2Q8TD16 824 aa18.41■□□□□ 0.54
PDE4C-211ENST00000597360 ANKRD7Q92527 254 aa18.4■□□□□ 0.54
PDE4C-211ENST00000597360 PTPN14Q15678 1187 aa18.4■□□□□ 0.54
PDE4C-211ENST00000597360 TAOK2Q9UL54 1235 aa18.4■□□□□ 0.54
PDE4C-211ENST00000597360 ZNF215Q9UL58 517 aaPredicted RBP18.4■□□□□ 0.54
PDE4C-211ENST00000597360 TET3O43151 1660 aa18.4■□□□□ 0.54
PDE4C-211ENST00000597360 HTATSF1O43719 755 aaKnown RBP18.4■□□□□ 0.54
PDE4C-211ENST00000597360 GNAI1P63096 354 aa18.4■□□□□ 0.54
PDE4C-211ENST00000597360 IRX3P78415 501 aaPredicted RBP18.4■□□□□ 0.54
PDE4C-211ENST00000597360 KRT24Q2M2I5 525 aa18.4■□□□□ 0.54
PDE4C-211ENST00000597360 CLIP2Q9UDT6 1046 aa18.4■□□□□ 0.54
PDE4C-211ENST00000597360 CEP152O94986 1710 aa18.4■□□□□ 0.54
PDE4C-211ENST00000597360 SLFN14P0C7P3 912 aa18.39■□□□□ 0.53
PDE4C-211ENST00000597360 CCDC83Q8IWF9 413 aa18.39■□□□□ 0.53
PDE4C-211ENST00000597360 TNMDQ9H2S6 317 aa18.39■□□□□ 0.53
PDE4C-211ENST00000597360 STX6O43752 255 aa18.39■□□□□ 0.53
PDE4C-211ENST00000597360 C8orf58Q8NAV2 365 aa18.39■□□□□ 0.53
PDE4C-211ENST00000597360 NUP62CLQ9H1M0 184 aa18.39■□□□□ 0.53
PDE4C-211ENST00000597360 FAM173BQ6P4H8 233 aa18.39■□□□□ 0.53
PDE4C-211ENST00000597360 SIGLEC1Q9BZZ2 1709 aa18.39■□□□□ 0.53
PDE4C-211ENST00000597360 DDX41Q9UJV9 622 aaKnown RBP18.39■□□□□ 0.53
PDE4C-211ENST00000597360 BECN2A8MW95 431 aa18.38■□□□□ 0.53
PDE4C-211ENST00000597360 MEIS3Q99687 375 aa18.38■□□□□ 0.53
PDE4C-211ENST00000597360 FAM83GA6ND36 823 aa18.38■□□□□ 0.53
PDE4C-211ENST00000597360 CPA1P15085 419 aa18.38■□□□□ 0.53
PDE4C-211ENST00000597360 MAP3K11Q16584 847 aa18.38■□□□□ 0.53
PDE4C-211ENST00000597360 NECTIN2Q92692 538 aa18.38■□□□□ 0.53
PDE4C-211ENST00000597360 TFIP11Q9UBB9 837 aaKnown RBP18.38■□□□□ 0.53
PDE4C-211ENST00000597360 KIF18AQ8NI77 898 aa18.37■□□□□ 0.53
PDE4C-211ENST00000597360 AP5Z1O43299 807 aa18.37■□□□□ 0.53
PDE4C-211ENST00000597360 ZSCAN22P10073 491 aaPredicted RBP18.37■□□□□ 0.53
PDE4C-211ENST00000597360 ZNF397Q8NF99 534 aaPredicted RBP18.37■□□□□ 0.53
PDE4C-211ENST00000597360 ANO6Q4KMQ2 910 aa18.37■□□□□ 0.53
PDE4C-211ENST00000597360 HOMER1Q86YM7 354 aa18.37■□□□□ 0.53
PDE4C-211ENST00000597360 IL1RAPL2Q9NP60 686 aa18.37■□□□□ 0.53
PDE4C-211ENST00000597360 MINK1Q8N4C8 1332 aaPredicted RBP18.37■□□□□ 0.53
PDE4C-211ENST00000597360 TEX35Q5T0J7 233 aa18.36■□□□□ 0.53
PDE4C-211ENST00000597360 MBIPQ9NS73 344 aa18.36■□□□□ 0.53
PDE4C-211ENST00000597360 EVC2Q86UK5 1308 aa18.36■□□□□ 0.53
PDE4C-211ENST00000597360 CEBPZQ03701 1054 aaKnown RBP18.36■□□□□ 0.53
PDE4C-211ENST00000597360 GNL2Q13823 731 aaKnown RBP18.36■□□□□ 0.53
PDE4C-211ENST00000597360 MLECQ14165 292 aa18.36■□□□□ 0.53
PDE4C-211ENST00000597360 SOX12O15370 315 aa18.36■□□□□ 0.53
PDE4C-211ENST00000597360 SYT1P21579 422 aa18.36■□□□□ 0.53
PDE4C-211ENST00000597360 FOSBP53539 338 aa18.36■□□□□ 0.53
PDE4C-211ENST00000597360 ESYT1Q9BSJ8 1104 aa18.35■□□□□ 0.53
PDE4C-211ENST00000597360 PAXBP1Q9Y5B6 917 aa18.35■□□□□ 0.53
PDE4C-211ENST00000597360 EFCAB6Q5THR3 1501 aa18.35■□□□□ 0.53
PDE4C-211ENST00000597360 PDE1AP54750 535 aa18.35■□□□□ 0.53
PDE4C-211ENST00000597360 C10orf67Q8IYJ2 551 aa18.35■□□□□ 0.53
PDE4C-211ENST00000597360 ABCC3O15438 1527 aa18.35■□□□□ 0.53
PDE4C-211ENST00000597360 CCAR2Q8N163 923 aaKnown RBP18.35■□□□□ 0.53
PDE4C-211ENST00000597360 FAM200AQ8TCP9 573 aa18.35■□□□□ 0.53
PDE4C-211ENST00000597360 PHACTR3Q96KR7 559 aa18.35■□□□□ 0.53
PDE4C-211ENST00000597360 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.35■□□□□ 0.53
PDE4C-211ENST00000597360 LMTK2Q8IWU2 1503 aa18.34■□□□□ 0.53
PDE4C-211ENST00000597360 CFAP65Q6ZU64 1925 aaKnown RBP18.34■□□□□ 0.53
PDE4C-211ENST00000597360 PTPRTO14522 1441 aa18.34■□□□□ 0.53
PDE4C-211ENST00000597360 F6X3S4 739 aa18.34■□□□□ 0.53
PDE4C-211ENST00000597360 NEK11Q8NG66 645 aa18.34■□□□□ 0.53
PDE4C-211ENST00000597360 NPATQ14207 1427 aa18.33■□□□□ 0.53
PDE4C-211ENST00000597360 ANKRD36BQ8N2N9 1353 aa18.33■□□□□ 0.53
PDE4C-211ENST00000597360 ARHGEF40Q8TER5 1519 aa18.33■□□□□ 0.53
PDE4C-211ENST00000597360 TYRO3Q06418 890 aa18.33■□□□□ 0.53
PDE4C-211ENST00000597360 RPAP2Q8IXW5 612 aaPredicted RBP18.33■□□□□ 0.53
PDE4C-211ENST00000597360 ANKRD44Q8N8A2 993 aa18.33■□□□□ 0.53
PDE4C-211ENST00000597360 SYNMO15061 1565 aa18.33■□□□□ 0.52
PDE4C-211ENST00000597360 ZRSR1Q15695 479 aaKnown RBP18.33■□□□□ 0.52
PDE4C-211ENST00000597360 SKIDA1Q1XH10 827 aa18.33■□□□□ 0.52
PDE4C-211ENST00000597360 KMT5BQ4FZB7 885 aa18.33■□□□□ 0.52
PDE4C-211ENST00000597360 DNAJC25Q9H1X3 360 aa18.33■□□□□ 0.52
PDE4C-211ENST00000597360 HNRNPH2P55795 449 aaKnown RBP18.32■□□□□ 0.52
PDE4C-211ENST00000597360 F13A1P00488 732 aa18.32■□□□□ 0.52
PDE4C-211ENST00000597360 ZNF165P49910 485 aa18.32■□□□□ 0.52
PDE4C-211ENST00000597360 CEP85Q6P2H3 762 aa18.32■□□□□ 0.52
PDE4C-211ENST00000597360 FAM177A1Q8N128 213 aaPredicted RBP18.32■□□□□ 0.52
PDE4C-211ENST00000597360 SPHKAPQ2M3C7 1700 aa18.32■□□□□ 0.52
PDE4C-211ENST00000597360 UGGT1Q9NYU2 1555 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms