RNA–Protein interactions for RNA: ENST00000596655.1

C19orf48-207, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 2

Gene C19orf48, Length 1,639 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-207ENST00000596655 U2AF1Q01081 240 aaKnown RBP eCLIP25.04■■□□□ 1.6
C19orf48-207ENST00000596655 SULT6B1Q6IMI4 303 aa25.04■■□□□ 1.6
C19orf48-207ENST00000596655 PLEKHF1Q96S99 279 aa25.04■■□□□ 1.6
C19orf48-207ENST00000596655 STK32BQ9NY57 414 aa25.04■■□□□ 1.6
C19orf48-207ENST00000596655 KDRP35968 1356 aa25.04■■□□□ 1.6
C19orf48-207ENST00000596655 IFNL2Q8IZJ0 200 aa25.03■■□□□ 1.6
C19orf48-207ENST00000596655 CCDC136Q96JN2 1154 aa25.03■■□□□ 1.6
C19orf48-207ENST00000596655 SLC15A2Q16348 729 aa25.02■■□□□ 1.6
C19orf48-207ENST00000596655 MPRIPQ6WCQ1 1025 aa25.02■■□□□ 1.6
C19orf48-207ENST00000596655 DIAPH1O60610 1272 aaKnown RBP25.01■■□□□ 1.59
C19orf48-207ENST00000596655 SLC27A3Q5K4L6 730 aa25.01■■□□□ 1.59
C19orf48-207ENST00000596655 EXOC6Q8TAG9 804 aa25.01■■□□□ 1.59
C19orf48-207ENST00000596655 PLEKHO1Q53GL0 409 aaPredicted RBP25.01■■□□□ 1.59
C19orf48-207ENST00000596655 KCNQ4P56696 695 aa25■■□□□ 1.59
C19orf48-207ENST00000596655 AMOTQ4VCS5 1084 aa24.98■■□□□ 1.59
C19orf48-207ENST00000596655 PDGFDQ9GZP0 370 aaPredicted RBP24.98■■□□□ 1.59
C19orf48-207ENST00000596655 TUBGCP6Q96RT7 1819 aa24.98■■□□□ 1.59
C19orf48-207ENST00000596655 ZNF530Q6P9A1 599 aaPredicted RBP24.97■■□□□ 1.59
C19orf48-207ENST00000596655 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.97■■□□□ 1.59
C19orf48-207ENST00000596655 PNNQ9H307 717 aaKnown RBP24.97■■□□□ 1.59
C19orf48-207ENST00000596655 TAF1LQ8IZX4 1826 aa24.97■■□□□ 1.59
C19orf48-207ENST00000596655 ZNF827Q17R98 1081 aa24.97■■□□□ 1.59
C19orf48-207ENST00000596655 CCNL1Q9UK58 526 aaPredicted RBP24.97■■□□□ 1.59
C19orf48-207ENST00000596655 QSER1Q2KHR3 1735 aa24.97■■□□□ 1.59
C19orf48-207ENST00000596655 C5P01031 1676 aa24.96■■□□□ 1.59
C19orf48-207ENST00000596655 PALLDQ8WX93 1383 aa24.96■■□□□ 1.59
C19orf48-207ENST00000596655 HMOX1P09601 288 aa24.96■■□□□ 1.59
C19orf48-207ENST00000596655 PIGBQ92521 554 aa24.96■■□□□ 1.59
C19orf48-207ENST00000596655 PLIN1O60240 522 aa24.94■■□□□ 1.58
C19orf48-207ENST00000596655 FCHSD2O94868 740 aa24.94■■□□□ 1.58
C19orf48-207ENST00000596655 TMOD3Q9NYL9 352 aa24.94■■□□□ 1.58
C19orf48-207ENST00000596655 KDM6AO15550 1401 aaPredicted RBP24.94■■□□□ 1.58
C19orf48-207ENST00000596655 AKT1S1Q96B36 256 aa24.94■■□□□ 1.58
C19orf48-207ENST00000596655 RRP7AQ9Y3A4 280 aaKnown RBP24.94■■□□□ 1.58
C19orf48-207ENST00000596655 VIRMAQ69YN4 1812 aaKnown RBP24.93■■□□□ 1.58
C19orf48-207ENST00000596655 U2SURPO15042 1029 aaKnown RBP24.93■■□□□ 1.58
C19orf48-207ENST00000596655 HSP90AB1P08238 724 aaKnown RBP24.93■■□□□ 1.58
C19orf48-207ENST00000596655 SPON1Q9HCB6 807 aa24.93■■□□□ 1.58
C19orf48-207ENST00000596655 SCN11AQ9UI33 1791 aa24.92■■□□□ 1.58
C19orf48-207ENST00000596655 TMPOP42166 694 aaKnown RBP24.92■■□□□ 1.58
C19orf48-207ENST00000596655 C1orf141Q5JVX7 400 aa24.92■■□□□ 1.58
C19orf48-207ENST00000596655 SMARCC1Q92922 1105 aaPredicted RBP24.92■■□□□ 1.58
C19orf48-207ENST00000596655 DCAF5Q96JK2 942 aa24.92■■□□□ 1.58
C19orf48-207ENST00000596655 CRBNQ96SW2 442 aa24.9■■□□□ 1.58
C19orf48-207ENST00000596655 IL16Q14005 1332 aa24.9■■□□□ 1.58
C19orf48-207ENST00000596655 ZBTB7AO95365 584 aa24.9■■□□□ 1.58
C19orf48-207ENST00000596655 MAPK8IP3Q9UPT6 1336 aa24.89■■□□□ 1.58
C19orf48-207ENST00000596655 ERVV-2B6SEH9 535 aa24.89■■□□□ 1.57
C19orf48-207ENST00000596655 NEUROD2Q15784 382 aa24.89■■□□□ 1.57
C19orf48-207ENST00000596655 RSPH6AQ9H0K4 717 aa24.89■■□□□ 1.57
C19orf48-207ENST00000596655 MYH16Q9H6N6 1097 aa24.88■■□□□ 1.57
C19orf48-207ENST00000596655 ASAP1Q9ULH1 1129 aa24.88■■□□□ 1.57
C19orf48-207ENST00000596655 TRIM35Q9UPQ4 493 aa24.87■■□□□ 1.57
C19orf48-207ENST00000596655 RBM19Q9Y4C8 960 aaKnown RBP24.87■■□□□ 1.57
C19orf48-207ENST00000596655 C20orf194Q5TEA3 1177 aa24.86■■□□□ 1.57
C19orf48-207ENST00000596655 TFCP2L1Q9NZI6 479 aa24.86■■□□□ 1.57
C19orf48-207ENST00000596655 C4BP0C0L5 1744 aa24.86■■□□□ 1.57
C19orf48-207ENST00000596655 CT47B1P0C2W7 299 aaPredicted RBP24.86■■□□□ 1.57
C19orf48-207ENST00000596655 PNPLA7Q6ZV29 1317 aa24.85■■□□□ 1.57
C19orf48-207ENST00000596655 ATG3Q9NT62 314 aa24.85■■□□□ 1.57
C19orf48-207ENST00000596655 ATF5Q9Y2D1 282 aaPredicted RBP24.85■■□□□ 1.57
C19orf48-207ENST00000596655 AKAP4Q5JQC9 854 aa24.84■■□□□ 1.57
C19orf48-207ENST00000596655 LOC102724428A0A0B4J2F2 783 aa24.83■■□□□ 1.57
C19orf48-207ENST00000596655 SIK1P57059 783 aa24.83■■□□□ 1.57
C19orf48-207ENST00000596655 CABP4P57796 275 aa24.83■■□□□ 1.57
C19orf48-207ENST00000596655 PDE3AQ14432 1141 aa24.83■■□□□ 1.57
C19orf48-207ENST00000596655 MTFR1LQ9H019 292 aa24.83■■□□□ 1.57
C19orf48-207ENST00000596655 MTHFSDQ2M296 383 aaKnown RBP24.83■■□□□ 1.56
C19orf48-207ENST00000596655 PPP1R1BQ9UD71 204 aaPredicted RBP24.83■■□□□ 1.56
C19orf48-207ENST00000596655 BCAR3O75815 825 aa24.82■■□□□ 1.56
C19orf48-207ENST00000596655 ADAMTS7Q9UKP4 1686 aa24.82■■□□□ 1.56
C19orf48-207ENST00000596655 PTGER2P43116 358 aa24.81■■□□□ 1.56
C19orf48-207ENST00000596655 ZNF831Q5JPB2 1677 aa24.81■■□□□ 1.56
C19orf48-207ENST00000596655 UBR3Q6ZT12 1888 aa24.81■■□□□ 1.56
C19orf48-207ENST00000596655 RARSP54136 660 aaKnown RBP24.8■■□□□ 1.56
C19orf48-207ENST00000596655 HMGB2P26583 209 aaKnown RBP24.79■■□□□ 1.56
C19orf48-207ENST00000596655 COL24A1Q17RW2 1714 aa24.79■■□□□ 1.56
C19orf48-207ENST00000596655 PRKAR2BP31323 418 aa24.79■■□□□ 1.56
C19orf48-207ENST00000596655 NFATC2IPQ8NCF5 419 aa24.79■■□□□ 1.56
C19orf48-207ENST00000596655 MRC1P22897 1456 aa24.78■■□□□ 1.56
C19orf48-207ENST00000596655 FANCIQ9NVI1 1328 aa24.78■■□□□ 1.56
C19orf48-207ENST00000596655 ATP6V1AP38606 617 aa24.78■■□□□ 1.56
C19orf48-207ENST00000596655 RIPK4P57078 832 aa24.78■■□□□ 1.56
C19orf48-207ENST00000596655 LGR6Q9HBX8 967 aa24.78■■□□□ 1.56
C19orf48-207ENST00000596655 ITPK1Q13572 414 aa24.77■■□□□ 1.56
C19orf48-207ENST00000596655 LINC00116Q8NCU8 138 aa24.77■■□□□ 1.56
C19orf48-207ENST00000596655 SLC16A10Q8TF71 515 aa24.77■■□□□ 1.56
C19orf48-207ENST00000596655 COL5A3P25940 1745 aaPredicted RBP24.77■■□□□ 1.56
C19orf48-207ENST00000596655 RNMTO43148 476 aaKnown RBP24.76■■□□□ 1.55
C19orf48-207ENST00000596655 NFE2L2Q16236 605 aa24.76■■□□□ 1.55
C19orf48-207ENST00000596655 SGIP1Q9BQI5 828 aa24.76■■□□□ 1.55
C19orf48-207ENST00000596655 KDM2BQ8NHM5 1336 aa24.76■■□□□ 1.55
C19orf48-207ENST00000596655 COL23A1Q86Y22 540 aaPredicted RBP24.75■■□□□ 1.55
C19orf48-207ENST00000596655 AK7Q96M32 723 aa24.75■■□□□ 1.55
C19orf48-207ENST00000596655 RBM42Q9BTD8 480 aaKnown RBP24.75■■□□□ 1.55
C19orf48-207ENST00000596655 NEFMP07197 916 aa24.75■■□□□ 1.55
C19orf48-207ENST00000596655 SLC4A9Q96Q91 983 aa24.75■■□□□ 1.55
C19orf48-207ENST00000596655 SLC52A2Q9HAB3 445 aa24.75■■□□□ 1.55
C19orf48-207ENST00000596655 DLG5Q8TDM6 1919 aa24.74■■□□□ 1.55
C19orf48-207ENST00000596655 MSH5O43196 834 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms