RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 ZNF827Q17R98 1081 aa19.93■□□□□ 0.78
SCN1B-204ENST00000596348 IL17REQ8NFR9 667 aa19.93■□□□□ 0.78
SCN1B-204ENST00000596348 C5P01031 1676 aa19.93■□□□□ 0.78
SCN1B-204ENST00000596348 ANP32CO43423 234 aa19.92■□□□□ 0.78
SCN1B-204ENST00000596348 SIPA1L3O60292 1781 aaPredicted RBP19.92■□□□□ 0.78
SCN1B-204ENST00000596348 TUBGCP6Q96RT7 1819 aa19.91■□□□□ 0.78
SCN1B-204ENST00000596348 SLC15A2Q16348 729 aa19.91■□□□□ 0.78
SCN1B-204ENST00000596348 STK32BQ9NY57 414 aa19.91■□□□□ 0.78
SCN1B-204ENST00000596348 CEMIPQ8WUJ3 1361 aa19.91■□□□□ 0.78
SCN1B-204ENST00000596348 LOC102724428A0A0B4J2F2 783 aa19.9■□□□□ 0.78
SCN1B-204ENST00000596348 SIK1P57059 783 aa19.9■□□□□ 0.78
SCN1B-204ENST00000596348 AKT1S1Q96B36 256 aa19.9■□□□□ 0.78
SCN1B-204ENST00000596348 CASZ1Q86V15 1759 aa19.9■□□□□ 0.78
SCN1B-204ENST00000596348 WDR43Q15061 677 aaKnown RBP eCLIP19.89■□□□□ 0.77
SCN1B-204ENST00000596348 SLC4A9Q96Q91 983 aa19.89■□□□□ 0.77
SCN1B-204ENST00000596348 PDGFDQ9GZP0 370 aaPredicted RBP19.89■□□□□ 0.77
SCN1B-204ENST00000596348 ADAMTS8Q9UP79 889 aa19.89■□□□□ 0.77
SCN1B-204ENST00000596348 ZNF831Q5JPB2 1677 aa19.88■□□□□ 0.77
SCN1B-204ENST00000596348 ITPK1Q13572 414 aa19.88■□□□□ 0.77
SCN1B-204ENST00000596348 MAPK8IP3Q9UPT6 1336 aa19.87■□□□□ 0.77
SCN1B-204ENST00000596348 NFE2L2Q16236 605 aa19.87■□□□□ 0.77
SCN1B-204ENST00000596348 MCM10Q7L590 875 aa19.87■□□□□ 0.77
SCN1B-204ENST00000596348 CCDC146Q8IYE0 955 aa19.87■□□□□ 0.77
SCN1B-204ENST00000596348 PNNQ9H307 717 aaKnown RBP19.87■□□□□ 0.77
SCN1B-204ENST00000596348 C4BP0C0L5 1744 aa19.87■□□□□ 0.77
SCN1B-204ENST00000596348 QSER1Q2KHR3 1735 aa19.86■□□□□ 0.77
SCN1B-204ENST00000596348 NEFMP07197 916 aa19.86■□□□□ 0.77
SCN1B-204ENST00000596348 SLC39A6Q13433 755 aa19.86■□□□□ 0.77
SCN1B-204ENST00000596348 DCTN1Q14203 1278 aa19.86■□□□□ 0.77
SCN1B-204ENST00000596348 KCPQ6ZWJ8 1503 aa19.86■□□□□ 0.77
SCN1B-204ENST00000596348 UBR2Q8IWV8 1755 aa19.85■□□□□ 0.77
SCN1B-204ENST00000596348 PTCD1O75127 700 aaKnown RBP19.85■□□□□ 0.77
SCN1B-204ENST00000596348 TEFQ10587 303 aa19.85■□□□□ 0.77
SCN1B-204ENST00000596348 LINC00116Q8NCU8 138 aa19.85■□□□□ 0.77
SCN1B-204ENST00000596348 RBM42Q9BTD8 480 aaKnown RBP19.85■□□□□ 0.77
SCN1B-204ENST00000596348 COL5A3P25940 1745 aaPredicted RBP19.85■□□□□ 0.77
SCN1B-204ENST00000596348 HTATSF1O43719 755 aaKnown RBP19.84■□□□□ 0.77
SCN1B-204ENST00000596348 ATP6V1AP38606 617 aa19.84■□□□□ 0.77
SCN1B-204ENST00000596348 RTF1Q92541 710 aaKnown RBP19.84■□□□□ 0.77
SCN1B-204ENST00000596348 TJP1Q07157 1748 aa19.84■□□□□ 0.77
SCN1B-204ENST00000596348 CICQ96RK0 1608 aaPredicted RBP19.84■□□□□ 0.77
SCN1B-204ENST00000596348 UBR3Q6ZT12 1888 aa19.83■□□□□ 0.76
SCN1B-204ENST00000596348 PNPLA7Q6ZV29 1317 aa19.82■□□□□ 0.76
SCN1B-204ENST00000596348 AMIGO3Q86WK7 504 aa19.82■□□□□ 0.76
SCN1B-204ENST00000596348 RUNDC1Q96C34 613 aa19.82■□□□□ 0.76
SCN1B-204ENST00000596348 MRS2Q9HD23 443 aa19.82■□□□□ 0.76
SCN1B-204ENST00000596348 TFCP2L1Q9NZI6 479 aa19.82■□□□□ 0.76
SCN1B-204ENST00000596348 LRP5O75197 1615 aa19.82■□□□□ 0.76
SCN1B-204ENST00000596348 MYH14Q7Z406 1995 aaKnown RBP19.82■□□□□ 0.76
SCN1B-204ENST00000596348 TMPOP42166 694 aaKnown RBP19.81■□□□□ 0.76
SCN1B-204ENST00000596348 THUMPD2Q9BTF0 503 aaKnown RBP19.81■□□□□ 0.76
SCN1B-204ENST00000596348 PNISRQ8TF01 805 aaKnown RBP19.8■□□□□ 0.76
SCN1B-204ENST00000596348 RRP7AQ9Y3A4 280 aaKnown RBP19.8■□□□□ 0.76
SCN1B-204ENST00000596348 KCNQ3O43525 872 aa19.79■□□□□ 0.76
SCN1B-204ENST00000596348 RIPK4P57078 832 aa19.79■□□□□ 0.76
SCN1B-204ENST00000596348 ZNF790Q6PG37 636 aa19.79■□□□□ 0.76
SCN1B-204ENST00000596348 SMIM5Q71RC9 77 aa19.79■□□□□ 0.76
SCN1B-204ENST00000596348 AK7Q96M32 723 aa19.78■□□□□ 0.76
SCN1B-204ENST00000596348 BTBD11A6QL63 1104 aa19.77■□□□□ 0.76
SCN1B-204ENST00000596348 ZBTB7AO95365 584 aa19.77■□□□□ 0.76
SCN1B-204ENST00000596348 TTC5Q8N0Z6 440 aa19.77■□□□□ 0.76
SCN1B-204ENST00000596348 ZNF496Q96IT1 587 aaPredicted RBP19.77■□□□□ 0.76
SCN1B-204ENST00000596348 HMGB2P26583 209 aaKnown RBP19.76■□□□□ 0.75
SCN1B-204ENST00000596348 NEUROD2Q15784 382 aa19.76■□□□□ 0.75
SCN1B-204ENST00000596348 COL23A1Q86Y22 540 aaPredicted RBP19.76■□□□□ 0.75
SCN1B-204ENST00000596348 DNAJC10Q8IXB1 793 aa19.76■□□□□ 0.75
SCN1B-204ENST00000596348 CNTNAP4Q9C0A0 1308 aa19.76■□□□□ 0.75
SCN1B-204ENST00000596348 KDM3BQ7LBC6 1761 aa19.75■□□□□ 0.75
SCN1B-204ENST00000596348 GNPATO15228 680 aa19.75■□□□□ 0.75
SCN1B-204ENST00000596348 HEG1Q9ULI3 1381 aa19.74■□□□□ 0.75
SCN1B-204ENST00000596348 APAF1O14727 1248 aa19.74■□□□□ 0.75
SCN1B-204ENST00000596348 CRKLP46109 303 aaKnown RBP19.74■□□□□ 0.75
SCN1B-204ENST00000596348 TAF7Q15545 349 aaPredicted RBP19.74■□□□□ 0.75
SCN1B-204ENST00000596348 RC3H1Q5TC82 1133 aaKnown RBP19.74■□□□□ 0.75
SCN1B-204ENST00000596348 MIS18AQ9NYP9 233 aa19.74■□□□□ 0.75
SCN1B-204ENST00000596348 TRIM35Q9UPQ4 493 aa19.74■□□□□ 0.75
SCN1B-204ENST00000596348 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.73■□□□□ 0.75
SCN1B-204ENST00000596348 PHF14O94880 888 aa19.73■□□□□ 0.75
SCN1B-204ENST00000596348 VSIG10Q8N0Z9 540 aa19.73■□□□□ 0.75
SCN1B-204ENST00000596348 SPON1Q9HCB6 807 aa19.73■□□□□ 0.75
SCN1B-204ENST00000596348 ATF5Q9Y2D1 282 aaPredicted RBP19.73■□□□□ 0.75
SCN1B-204ENST00000596348 CYP19A1P11511 503 aaPredicted RBP19.72■□□□□ 0.75
SCN1B-204ENST00000596348 LMOD3Q0VAK6 560 aa19.72■□□□□ 0.75
SCN1B-204ENST00000596348 COL24A1Q17RW2 1714 aa19.72■□□□□ 0.75
SCN1B-204ENST00000596348 INTS5Q6P9B9 1019 aaKnown RBP19.72■□□□□ 0.75
SCN1B-204ENST00000596348 MTFR1LQ9H019 292 aa19.72■□□□□ 0.75
SCN1B-204ENST00000596348 SSFA2P28290 1259 aa19.71■□□□□ 0.75
SCN1B-204ENST00000596348 PTGER2P43116 358 aa19.71■□□□□ 0.75
SCN1B-204ENST00000596348 FMNL2Q96PY5 1086 aa19.71■□□□□ 0.75
SCN1B-204ENST00000596348 MSH5O43196 834 aa19.7■□□□□ 0.74
SCN1B-204ENST00000596348 RPS6KA4O75676 772 aa19.7■□□□□ 0.74
SCN1B-204ENST00000596348 FLAD1Q8NFF5 587 aa19.7■□□□□ 0.74
SCN1B-204ENST00000596348 SLC16A10Q8TF71 515 aa19.7■□□□□ 0.74
SCN1B-204ENST00000596348 SGIP1Q9BQI5 828 aa19.7■□□□□ 0.74
SCN1B-204ENST00000596348 C4AP0C0L4 1744 aa19.7■□□□□ 0.74
SCN1B-204ENST00000596348 CCDC87Q9NVE4 849 aa19.69■□□□□ 0.74
SCN1B-204ENST00000596348 RTCBQ9Y3I0 505 aaKnown RBP19.69■□□□□ 0.74
SCN1B-204ENST00000596348 SENP3-EIF4A1A0A087X0R7 540 aa19.68■□□□□ 0.74
SCN1B-204ENST00000596348 PRAMEF22A3QJZ6 481 aa19.68■□□□□ 0.74
SCN1B-204ENST00000596348 MSL1Q68DK7 614 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms