RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 SLC39A6Q13433 755 aa20.44■□□□□ 0.86
USE1-206ENST00000595101 AKT1S1Q96B36 256 aa20.44■□□□□ 0.86
USE1-206ENST00000595101 STK32BQ9NY57 414 aa20.44■□□□□ 0.86
USE1-206ENST00000595101 ADAMTS8Q9UP79 889 aa20.44■□□□□ 0.86
USE1-206ENST00000595101 ANP32CO43423 234 aa20.44■□□□□ 0.86
USE1-206ENST00000595101 MCM10Q7L590 875 aa20.44■□□□□ 0.86
USE1-206ENST00000595101 CCDC146Q8IYE0 955 aa20.44■□□□□ 0.86
USE1-206ENST00000595101 LY75O60449 1722 aa20.44■□□□□ 0.86
USE1-206ENST00000595101 PAPPAQ13219 1627 aa20.43■□□□□ 0.86
USE1-206ENST00000595101 PTCD1O75127 700 aaKnown RBP20.43■□□□□ 0.86
USE1-206ENST00000595101 ITPK1Q13572 414 aa20.43■□□□□ 0.86
USE1-206ENST00000595101 RBM42Q9BTD8 480 aaKnown RBP20.43■□□□□ 0.86
USE1-206ENST00000595101 SMIM5Q71RC9 77 aa20.42■□□□□ 0.86
USE1-206ENST00000595101 ATP6V1AP38606 617 aa20.41■□□□□ 0.86
USE1-206ENST00000595101 LINC00116Q8NCU8 138 aa20.41■□□□□ 0.86
USE1-206ENST00000595101 SCN11AQ9UI33 1791 aa20.41■□□□□ 0.86
USE1-206ENST00000595101 WDR43Q15061 677 aaKnown RBP eCLIP20.4■□□□□ 0.86
USE1-206ENST00000595101 AMIGO3Q86WK7 504 aa20.4■□□□□ 0.86
USE1-206ENST00000595101 CEMIPQ8WUJ3 1361 aa20.4■□□□□ 0.86
USE1-206ENST00000595101 MRC1P22897 1456 aa20.39■□□□□ 0.85
USE1-206ENST00000595101 ADAMTS7Q9UKP4 1686 aa20.39■□□□□ 0.85
USE1-206ENST00000595101 TFCP2L1Q9NZI6 479 aa20.39■□□□□ 0.85
USE1-206ENST00000595101 NFE2L2Q16236 605 aa20.38■□□□□ 0.85
USE1-206ENST00000595101 THUMPD2Q9BTF0 503 aaKnown RBP20.38■□□□□ 0.85
USE1-206ENST00000595101 RRP7AQ9Y3A4 280 aaKnown RBP20.38■□□□□ 0.85
USE1-206ENST00000595101 TEFQ10587 303 aa20.37■□□□□ 0.85
USE1-206ENST00000595101 RTF1Q92541 710 aaKnown RBP20.37■□□□□ 0.85
USE1-206ENST00000595101 MAPK8IP3Q9UPT6 1336 aa20.37■□□□□ 0.85
USE1-206ENST00000595101 KCNQ3O43525 872 aa20.36■□□□□ 0.85
USE1-206ENST00000595101 ZBTB7AO95365 584 aa20.36■□□□□ 0.85
USE1-206ENST00000595101 NEFMP07197 916 aa20.36■□□□□ 0.85
USE1-206ENST00000595101 PNPLA7Q6ZV29 1317 aa20.36■□□□□ 0.85
USE1-206ENST00000595101 PNNQ9H307 717 aaKnown RBP20.35■□□□□ 0.85
USE1-206ENST00000595101 SENP3-EIF4A1A0A087X0R7 540 aa20.34■□□□□ 0.85
USE1-206ENST00000595101 NEUROD2Q15784 382 aa20.34■□□□□ 0.85
USE1-206ENST00000595101 MRS2Q9HD23 443 aa20.34■□□□□ 0.85
USE1-206ENST00000595101 TMPOP42166 694 aaKnown RBP20.34■□□□□ 0.85
USE1-206ENST00000595101 RIPK4P57078 832 aa20.34■□□□□ 0.85
USE1-206ENST00000595101 RUNDC1Q96C34 613 aa20.34■□□□□ 0.85
USE1-206ENST00000595101 MIS18AQ9NYP9 233 aa20.34■□□□□ 0.85
USE1-206ENST00000595101 HTATSF1O43719 755 aaKnown RBP20.33■□□□□ 0.84
USE1-206ENST00000595101 COL23A1Q86Y22 540 aaPredicted RBP20.33■□□□□ 0.84
USE1-206ENST00000595101 ATF5Q9Y2D1 282 aaPredicted RBP20.33■□□□□ 0.84
USE1-206ENST00000595101 BTBD11A6QL63 1104 aa20.32■□□□□ 0.84
USE1-206ENST00000595101 ZNF790Q6PG37 636 aa20.32■□□□□ 0.84
USE1-206ENST00000595101 PNISRQ8TF01 805 aaKnown RBP20.32■□□□□ 0.84
USE1-206ENST00000595101 VIRMAQ69YN4 1812 aaKnown RBP20.32■□□□□ 0.84
USE1-206ENST00000595101 C5P01031 1676 aa20.32■□□□□ 0.84
USE1-206ENST00000595101 PHF14O94880 888 aa20.31■□□□□ 0.84
USE1-206ENST00000595101 DNAJC10Q8IXB1 793 aa20.31■□□□□ 0.84
USE1-206ENST00000595101 ZNF496Q96IT1 587 aaPredicted RBP20.31■□□□□ 0.84
USE1-206ENST00000595101 AK7Q96M32 723 aa20.31■□□□□ 0.84
USE1-206ENST00000595101 KCPQ6ZWJ8 1503 aa20.31■□□□□ 0.84
USE1-206ENST00000595101 TAF1LQ8IZX4 1826 aa20.3■□□□□ 0.84
USE1-206ENST00000595101 C4BP0C0L5 1744 aa20.3■□□□□ 0.84
USE1-206ENST00000595101 CASZ1Q86V15 1759 aa20.3■□□□□ 0.84
USE1-206ENST00000595101 GNPATO15228 680 aa20.29■□□□□ 0.84
USE1-206ENST00000595101 TTC5Q8N0Z6 440 aa20.29■□□□□ 0.84
USE1-206ENST00000595101 MSH5O43196 834 aa20.29■□□□□ 0.84
USE1-206ENST00000595101 TUBGCP6Q96RT7 1819 aa20.28■□□□□ 0.84
USE1-206ENST00000595101 APAF1O14727 1248 aa20.28■□□□□ 0.84
USE1-206ENST00000595101 CRKLP46109 303 aaKnown RBP20.28■□□□□ 0.84
USE1-206ENST00000595101 TAF7Q15545 349 aaPredicted RBP20.28■□□□□ 0.84
USE1-206ENST00000595101 TRIM35Q9UPQ4 493 aa20.28■□□□□ 0.84
USE1-206ENST00000595101 DLG5Q8TDM6 1919 aa20.27■□□□□ 0.84
USE1-206ENST00000595101 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.27■□□□□ 0.84
USE1-206ENST00000595101 PRAMEF22A3QJZ6 481 aa20.27■□□□□ 0.84
USE1-206ENST00000595101 PTGER2P43116 358 aa20.27■□□□□ 0.84
USE1-206ENST00000595101 SPON1Q9HCB6 807 aa20.27■□□□□ 0.84
USE1-206ENST00000595101 SIPA1L3O60292 1781 aaPredicted RBP20.27■□□□□ 0.84
USE1-206ENST00000595101 INTS5Q6P9B9 1019 aaKnown RBP20.26■□□□□ 0.83
USE1-206ENST00000595101 MTFR1LQ9H019 292 aa20.26■□□□□ 0.83
USE1-206ENST00000595101 CYP19A1P11511 503 aaPredicted RBP20.25■□□□□ 0.83
USE1-206ENST00000595101 MSL1Q68DK7 614 aa20.25■□□□□ 0.83
USE1-206ENST00000595101 CNTNAP4Q9C0A0 1308 aa20.25■□□□□ 0.83
USE1-206ENST00000595101 RC3H1Q5TC82 1133 aaKnown RBP20.24■□□□□ 0.83
USE1-206ENST00000595101 SGIP1Q9BQI5 828 aa20.24■□□□□ 0.83
USE1-206ENST00000595101 TJP1Q07157 1748 aa20.24■□□□□ 0.83
USE1-206ENST00000595101 HEG1Q9ULI3 1381 aa20.24■□□□□ 0.83
USE1-206ENST00000595101 VSIG10Q8N0Z9 540 aa20.23■□□□□ 0.83
USE1-206ENST00000595101 SSFA2P28290 1259 aa20.23■□□□□ 0.83
USE1-206ENST00000595101 FMNL2Q96PY5 1086 aa20.23■□□□□ 0.83
USE1-206ENST00000595101 RTCBQ9Y3I0 505 aaKnown RBP20.23■□□□□ 0.83
USE1-206ENST00000595101 RPS6KA4O75676 772 aa20.22■□□□□ 0.83
USE1-206ENST00000595101 FAM9BQ8IZU0 186 aa20.22■□□□□ 0.83
USE1-206ENST00000595101 ARHGEF1Q92888 912 aaKnown RBP20.22■□□□□ 0.83
USE1-206ENST00000595101 ZBTB1Q9Y2K1 713 aa20.22■□□□□ 0.83
USE1-206ENST00000595101 USP16Q9Y5T5 823 aa20.22■□□□□ 0.83
USE1-206ENST00000595101 ZNF831Q5JPB2 1677 aa20.22■□□□□ 0.83
USE1-206ENST00000595101 MYH14Q7Z406 1995 aaKnown RBP20.22■□□□□ 0.83
USE1-206ENST00000595101 UBR2Q8IWV8 1755 aa20.22■□□□□ 0.83
USE1-206ENST00000595101 COL5A3P25940 1745 aaPredicted RBP20.21■□□□□ 0.83
USE1-206ENST00000595101 UBR3Q6ZT12 1888 aa20.21■□□□□ 0.83
USE1-206ENST00000595101 CCDC87Q9NVE4 849 aa20.21■□□□□ 0.83
USE1-206ENST00000595101 LRP5O75197 1615 aa20.21■□□□□ 0.83
USE1-206ENST00000595101 HMGB2P26583 209 aaKnown RBP20.2■□□□□ 0.82
USE1-206ENST00000595101 TRAPPC3LQ5T215 181 aa20.2■□□□□ 0.82
USE1-206ENST00000595101 FLAD1Q8NFF5 587 aa20.2■□□□□ 0.82
USE1-206ENST00000595101 SLC16A10Q8TF71 515 aa20.2■□□□□ 0.82
USE1-206ENST00000595101 PIP4K2AP48426 406 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms