RNA–Protein interactions for RNA: ENST00000594814.5

LRIT3-202, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRIT3, Length 3,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-202ENST00000594814 USP19O94966 1318 aa5.36□□□□□ -1.55
LRIT3-202ENST00000594814 UQCRHLA0A096LP55 91 aa5.36□□□□□ -1.55
LRIT3-202ENST00000594814 UQCRHP07919 91 aa5.36□□□□□ -1.55
LRIT3-202ENST00000594814 FBLN1P23142 703 aa5.36□□□□□ -1.55
LRIT3-202ENST00000594814 SSFA2P28290 1259 aa5.36□□□□□ -1.55
LRIT3-202ENST00000594814 DDIT3P35638 169 aa5.36□□□□□ -1.55
LRIT3-202ENST00000594814 IRX3P78415 501 aaPredicted RBP5.36□□□□□ -1.55
LRIT3-202ENST00000594814 APBB1IPQ7Z5R6 666 aaPredicted RBP5.36□□□□□ -1.55
LRIT3-202ENST00000594814 ZKSCAN5Q9Y2L8 839 aa5.36□□□□□ -1.55
LRIT3-202ENST00000594814 MYO3AQ8NEV4 1616 aa5.36□□□□□ -1.55
LRIT3-202ENST00000594814 ROBO2Q9HCK4 1378 aa5.36□□□□□ -1.55
LRIT3-202ENST00000594814 TTC36A6NLP5 189 aa5.36□□□□□ -1.55
LRIT3-202ENST00000594814 PRAM1Q96QH2 718 aa5.36□□□□□ -1.55
LRIT3-202ENST00000594814 SLC12A5Q9H2X9 1139 aa5.36□□□□□ -1.55
LRIT3-202ENST00000594814 CABP2Q9NPB3 220 aa5.36□□□□□ -1.55
LRIT3-202ENST00000594814 RPGRIP1LQ68CZ1 1315 aa5.36□□□□□ -1.55
LRIT3-202ENST00000594814 PTMAP06454 111 aaKnown RBP5.36□□□□□ -1.55
LRIT3-202ENST00000594814 FAM163BP0C2L3 166 aa5.36□□□□□ -1.55
LRIT3-202ENST00000594814 BDNFP23560 247 aa5.36□□□□□ -1.55
LRIT3-202ENST00000594814 KLHL40Q2TBA0 621 aa5.36□□□□□ -1.55
LRIT3-202ENST00000594814 FAM163AQ96GL9 167 aaPredicted RBP5.36□□□□□ -1.55
LRIT3-202ENST00000594814 SENP7Q9BQF6 1050 aa5.36□□□□□ -1.55
LRIT3-202ENST00000594814 GOLGB1Q14789 3259 aaKnown RBP5.36□□□□□ -1.55
LRIT3-202ENST00000594814 VAMP1P23763 118 aa5.35□□□□□ -1.55
LRIT3-202ENST00000594814 EVA1CP58658 441 aa5.35□□□□□ -1.55
LRIT3-202ENST00000594814 LSM14AQ8ND56 463 aaKnown RBP5.35□□□□□ -1.55
LRIT3-202ENST00000594814 TULP4Q9NRJ4 1543 aa5.35□□□□□ -1.55
LRIT3-202ENST00000594814 MED14O60244 1454 aa5.35□□□□□ -1.55
LRIT3-202ENST00000594814 MED1Q15648 1581 aaPredicted RBP5.35□□□□□ -1.55
LRIT3-202ENST00000594814 VIL1P09327 827 aaKnown RBP5.35□□□□□ -1.55
LRIT3-202ENST00000594814 NASPP49321 788 aaPredicted RBP5.35□□□□□ -1.55
LRIT3-202ENST00000594814 MTA1Q13330 715 aa5.35□□□□□ -1.55
LRIT3-202ENST00000594814 ESF1Q9H501 851 aaKnown RBP5.35□□□□□ -1.55
LRIT3-202ENST00000594814 DIAPH3Q9NSV4 1193 aa5.35□□□□□ -1.55
LRIT3-202ENST00000594814 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.35□□□□□ -1.55
LRIT3-202ENST00000594814 STAG3Q9UJ98 1225 aa5.35□□□□□ -1.55
LRIT3-202ENST00000594814 NUTM2FA1L443 756 aa5.35□□□□□ -1.55
LRIT3-202ENST00000594814 KCNV2Q8TDN2 545 aa5.35□□□□□ -1.55
LRIT3-202ENST00000594814 PANK3Q9H999 370 aa5.35□□□□□ -1.55
LRIT3-202ENST00000594814 SPINK5Q9NQ38 1064 aaPredicted RBP5.35□□□□□ -1.55
LRIT3-202ENST00000594814 OGFRQ9NZT2 677 aa5.35□□□□□ -1.55
LRIT3-202ENST00000594814 MYOM1P52179 1685 aa5.35□□□□□ -1.55
LRIT3-202ENST00000594814 SRCAPQ6ZRS2 3230 aa5.34□□□□□ -1.55
LRIT3-202ENST00000594814 MINK1Q8N4C8 1332 aaPredicted RBP5.34□□□□□ -1.55
LRIT3-202ENST00000594814 C1QTNF12Q5T7M4 302 aa5.34□□□□□ -1.55
LRIT3-202ENST00000594814 OTUD6BQ8N6M0 293 aa5.34□□□□□ -1.55
LRIT3-202ENST00000594814 YTHDC2Q9H6S0 1430 aaKnown RBP5.34□□□□□ -1.55
LRIT3-202ENST00000594814 ARHGEF28Q8N1W1 1705 aaKnown RBP5.34□□□□□ -1.55
LRIT3-202ENST00000594814 ERBB4Q15303 1308 aa5.34□□□□□ -1.55
LRIT3-202ENST00000594814 ARHGAP23Q9P227 1491 aa5.34□□□□□ -1.55
LRIT3-202ENST00000594814 PARNO95453 639 aaKnown RBP5.34□□□□□ -1.55
LRIT3-202ENST00000594814 TCF3P15923 654 aa5.34□□□□□ -1.55
LRIT3-202ENST00000594814 EGFLAMQ63HQ2 1017 aa5.34□□□□□ -1.55
LRIT3-202ENST00000594814 CAVIN1Q6NZI2 390 aaKnown RBP5.34□□□□□ -1.55
LRIT3-202ENST00000594814 BRMS1Q9HCU9 246 aa5.34□□□□□ -1.55
LRIT3-202ENST00000594814 IGHDP01880 384 aa5.34□□□□□ -1.56
LRIT3-202ENST00000594814 SEMA3FQ13275 785 aa5.34□□□□□ -1.56
LRIT3-202ENST00000594814 RPAINQ86UA6 219 aa5.34□□□□□ -1.56
LRIT3-202ENST00000594814 HSCBQ8IWL3 235 aa5.34□□□□□ -1.56
LRIT3-202ENST00000594814 FAM184AQ8NB25 1140 aa5.34□□□□□ -1.56
LRIT3-202ENST00000594814 NKTRP30414 1462 aaKnown RBP5.33□□□□□ -1.56
LRIT3-202ENST00000594814 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.33□□□□□ -1.56
LRIT3-202ENST00000594814 CEP170BQ9Y4F5 1589 aaPredicted RBP5.33□□□□□ -1.56
LRIT3-202ENST00000594814 TULP2O00295 520 aa5.33□□□□□ -1.56
LRIT3-202ENST00000594814 RAB3GAP1Q15042 981 aa5.33□□□□□ -1.56
LRIT3-202ENST00000594814 ANKRD13AQ8IZ07 590 aa5.33□□□□□ -1.56
LRIT3-202ENST00000594814 TIGD1Q96MW7 591 aa5.33□□□□□ -1.56
LRIT3-202ENST00000594814 CRBNQ96SW2 442 aa5.33□□□□□ -1.56
LRIT3-202ENST00000594814 ARHGEF10LQ9HCE6 1279 aa5.33□□□□□ -1.56
LRIT3-202ENST00000594814 PLSCR2Q9NRY7 297 aa5.33□□□□□ -1.56
LRIT3-202ENST00000594814 ATF5Q9Y2D1 282 aaPredicted RBP5.33□□□□□ -1.56
LRIT3-202ENST00000594814 TMEM94Q12767 1356 aa5.33□□□□□ -1.56
LRIT3-202ENST00000594814 CD163L1Q9NR16 1453 aa5.33□□□□□ -1.56
LRIT3-202ENST00000594814 PRR36Q9H6K5 1346 aa5.33□□□□□ -1.56
LRIT3-202ENST00000594814 GIGYF1O75420 1035 aaPredicted RBP5.33□□□□□ -1.56
LRIT3-202ENST00000594814 KCNA6P17658 529 aa5.33□□□□□ -1.56
LRIT3-202ENST00000594814 KIAA2012Q0VF49 1180 aa5.33□□□□□ -1.56
LRIT3-202ENST00000594814 FOXD4Q12950 439 aaPredicted RBP5.33□□□□□ -1.56
LRIT3-202ENST00000594814 DNTTIP2Q5QJE6 756 aaKnown RBP5.33□□□□□ -1.56
LRIT3-202ENST00000594814 KRBA2Q6ZNG9 492 aa5.33□□□□□ -1.56
LRIT3-202ENST00000594814 ZRANB1Q9UGI0 708 aa5.33□□□□□ -1.56
LRIT3-202ENST00000594814 SLIT1O75093 1534 aa5.33□□□□□ -1.56
LRIT3-202ENST00000594814 KIAA1210Q9ULL0 1709 aa5.32□□□□□ -1.56
LRIT3-202ENST00000594814 CCDC194A0A1B0GVG4 234 aa5.32□□□□□ -1.56
LRIT3-202ENST00000594814 SCP2P22307 547 aa5.32□□□□□ -1.56
LRIT3-202ENST00000594814 NEUROD2Q15784 382 aa5.32□□□□□ -1.56
LRIT3-202ENST00000594814 LDLRAD1Q5T700 205 aa5.32□□□□□ -1.56
LRIT3-202ENST00000594814 RNF20Q5VTR2 975 aa5.32□□□□□ -1.56
LRIT3-202ENST00000594814 NBPF10Q6P3W6 841 aaKnown RBP5.32□□□□□ -1.56
LRIT3-202ENST00000594814 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.32□□□□□ -1.56
LRIT3-202ENST00000594814 NUB1Q9Y5A7 615 aa5.32□□□□□ -1.56
LRIT3-202ENST00000594814 SETBP1Q9Y6X0 1596 aa5.32□□□□□ -1.56
LRIT3-202ENST00000594814 CC2D1BQ5T0F9 858 aaKnown RBP5.32□□□□□ -1.56
LRIT3-202ENST00000594814 TRMT2AQ8IZ69 625 aaKnown RBP5.32□□□□□ -1.56
LRIT3-202ENST00000594814 PMM1Q92871 262 aa5.32□□□□□ -1.56
LRIT3-202ENST00000594814 TBC1D2Q9BYX2 928 aa5.32□□□□□ -1.56
LRIT3-202ENST00000594814 FAM13BQ9NYF5 915 aa5.32□□□□□ -1.56
LRIT3-202ENST00000594814 QRICH2Q9H0J4 1663 aa5.32□□□□□ -1.56
LRIT3-202ENST00000594814 FOXD4L6Q3SYB3 417 aaPredicted RBP5.32□□□□□ -1.56
LRIT3-202ENST00000594814 FOXD4L3Q6VB84 417 aaPredicted RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms