RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 TUBGCP6Q96RT7 1819 aa19.81■□□□□ 0.76
USE1-205ENST00000594724 HMGB2P26583 209 aaKnown RBP19.8■□□□□ 0.76
USE1-205ENST00000594724 SMIM5Q71RC9 77 aa19.8■□□□□ 0.76
USE1-205ENST00000594724 SLC16A10Q8TF71 515 aa19.8■□□□□ 0.76
USE1-205ENST00000594724 NUDCQ9Y266 331 aa19.8■□□□□ 0.76
USE1-205ENST00000594724 RNMTO43148 476 aaKnown RBP19.79■□□□□ 0.76
USE1-205ENST00000594724 AMIGO3Q86WK7 504 aa19.79■□□□□ 0.76
USE1-205ENST00000594724 AK7Q96M32 723 aa19.79■□□□□ 0.76
USE1-205ENST00000594724 SLC4A9Q96Q91 983 aa19.79■□□□□ 0.76
USE1-205ENST00000594724 QSER1Q2KHR3 1735 aa19.79■□□□□ 0.76
USE1-205ENST00000594724 TAF1LQ8IZX4 1826 aa19.79■□□□□ 0.76
USE1-205ENST00000594724 C4BP0C0L5 1744 aa19.77■□□□□ 0.76
USE1-205ENST00000594724 PTCD1O75127 700 aaKnown RBP19.77■□□□□ 0.76
USE1-205ENST00000594724 U2AF1L5P0DN76 240 aaPredicted RBP19.77■□□□□ 0.76
USE1-205ENST00000594724 PRKAR2BP31323 418 aa19.77■□□□□ 0.76
USE1-205ENST00000594724 U2AF1Q01081 240 aaKnown RBP eCLIP19.77■□□□□ 0.76
USE1-205ENST00000594724 RSPH6AQ9H0K4 717 aa19.77■□□□□ 0.76
USE1-205ENST00000594724 SLC52A2Q9HAB3 445 aa19.77■□□□□ 0.76
USE1-205ENST00000594724 PHF14O94880 888 aa19.76■□□□□ 0.75
USE1-205ENST00000594724 PHACTR3Q96KR7 559 aa19.76■□□□□ 0.75
USE1-205ENST00000594724 ARXQ96QS3 562 aa19.76■□□□□ 0.75
USE1-205ENST00000594724 SCN11AQ9UI33 1791 aa19.75■□□□□ 0.75
USE1-205ENST00000594724 FHDC1Q9C0D6 1143 aaPredicted RBP19.75■□□□□ 0.75
USE1-205ENST00000594724 MSL1Q68DK7 614 aa19.74■□□□□ 0.75
USE1-205ENST00000594724 FLAD1Q8NFF5 587 aa19.74■□□□□ 0.75
USE1-205ENST00000594724 GAS2L2Q8NHY3 880 aa19.74■□□□□ 0.75
USE1-205ENST00000594724 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.73■□□□□ 0.75
USE1-205ENST00000594724 GNPATO15228 680 aa19.73■□□□□ 0.75
USE1-205ENST00000594724 POLD1P28340 1107 aa19.73■□□□□ 0.75
USE1-205ENST00000594724 ZEB1P37275 1124 aaPredicted RBP19.73■□□□□ 0.75
USE1-205ENST00000594724 SLC39A6Q13433 755 aa19.73■□□□□ 0.75
USE1-205ENST00000594724 GNAT3A8MTJ3 354 aa19.72■□□□□ 0.75
USE1-205ENST00000594724 FCHSD2O94868 740 aa19.72■□□□□ 0.75
USE1-205ENST00000594724 IL17REQ8NFR9 667 aa19.72■□□□□ 0.75
USE1-205ENST00000594724 SYT17Q9BSW7 474 aa19.72■□□□□ 0.75
USE1-205ENST00000594724 MAP3K5Q99683 1374 aa19.7■□□□□ 0.74
USE1-205ENST00000594724 SSFA2P28290 1259 aa19.7■□□□□ 0.74
USE1-205ENST00000594724 RALBP1Q15311 655 aa19.7■□□□□ 0.74
USE1-205ENST00000594724 UBR3Q6ZT12 1888 aa19.69■□□□□ 0.74
USE1-205ENST00000594724 KLHL34Q8N239 644 aa19.69■□□□□ 0.74
USE1-205ENST00000594724 MRC1P22897 1456 aa19.68■□□□□ 0.74
USE1-205ENST00000594724 RC3H1Q5TC82 1133 aaKnown RBP19.68■□□□□ 0.74
USE1-205ENST00000594724 RTCBQ9Y3I0 505 aaKnown RBP19.68■□□□□ 0.74
USE1-205ENST00000594724 ADAMTS7Q9UKP4 1686 aa19.68■□□□□ 0.74
USE1-205ENST00000594724 TEFQ10587 303 aa19.67■□□□□ 0.74
USE1-205ENST00000594724 ZNF831Q5JPB2 1677 aa19.67■□□□□ 0.74
USE1-205ENST00000594724 COL24A1Q17RW2 1714 aa19.67■□□□□ 0.74
USE1-205ENST00000594724 VIRMAQ69YN4 1812 aaKnown RBP19.67■□□□□ 0.74
USE1-205ENST00000594724 TRAPPC3LQ5T215 181 aa19.66■□□□□ 0.74
USE1-205ENST00000594724 DNAJC10Q8IXB1 793 aa19.66■□□□□ 0.74
USE1-205ENST00000594724 CNTNAP4Q9C0A0 1308 aa19.66■□□□□ 0.74
USE1-205ENST00000594724 RPS6KA4O75676 772 aa19.65■□□□□ 0.74
USE1-205ENST00000594724 CRKLP46109 303 aaKnown RBP19.65■□□□□ 0.74
USE1-205ENST00000594724 DCAF8L1A6NGE4 600 aa19.64■□□□□ 0.73
USE1-205ENST00000594724 ARHGEF1Q92888 912 aaKnown RBP19.64■□□□□ 0.73
USE1-205ENST00000594724 COL5A3P25940 1745 aaPredicted RBP19.64■□□□□ 0.73
USE1-205ENST00000594724 CEMIPQ8WUJ3 1361 aa19.63■□□□□ 0.73
USE1-205ENST00000594724 MCM10Q7L590 875 aa19.63■□□□□ 0.73
USE1-205ENST00000594724 TTC5Q8N0Z6 440 aa19.63■□□□□ 0.73
USE1-205ENST00000594724 MYBBP1AQ9BQG0 1328 aaKnown RBP19.62■□□□□ 0.73
USE1-205ENST00000594724 DCTN1Q14203 1278 aa19.62■□□□□ 0.73
USE1-205ENST00000594724 INTS5Q6P9B9 1019 aaKnown RBP19.62■□□□□ 0.73
USE1-205ENST00000594724 RTF1Q92541 710 aaKnown RBP19.62■□□□□ 0.73
USE1-205ENST00000594724 TJP1Q07157 1748 aa19.62■□□□□ 0.73
USE1-205ENST00000594724 KCPQ6ZWJ8 1503 aa19.61■□□□□ 0.73
USE1-205ENST00000594724 MYH14Q7Z406 1995 aaKnown RBP19.61■□□□□ 0.73
USE1-205ENST00000594724 ZNF790Q6PG37 636 aa19.61■□□□□ 0.73
USE1-205ENST00000594724 NLGN2Q8NFZ4 835 aa19.61■□□□□ 0.73
USE1-205ENST00000594724 PLEKHF1Q96S99 279 aa19.61■□□□□ 0.73
USE1-205ENST00000594724 KCNQ3O43525 872 aa19.6■□□□□ 0.73
USE1-205ENST00000594724 NEFMP07197 916 aa19.6■□□□□ 0.73
USE1-205ENST00000594724 CYP19A1P11511 503 aaPredicted RBP19.6■□□□□ 0.73
USE1-205ENST00000594724 ADRA2BP18089 450 aa19.6■□□□□ 0.73
USE1-205ENST00000594724 RFC4P35249 363 aa19.6■□□□□ 0.73
USE1-205ENST00000594724 ZNF496Q96IT1 587 aaPredicted RBP19.6■□□□□ 0.73
USE1-205ENST00000594724 CCDC87Q9NVE4 849 aa19.6■□□□□ 0.73
USE1-205ENST00000594724 BTBD11A6QL63 1104 aa19.59■□□□□ 0.73
USE1-205ENST00000594724 VSIG10Q8N0Z9 540 aa19.59■□□□□ 0.73
USE1-205ENST00000594724 HTATSF1O43719 755 aaKnown RBP19.58■□□□□ 0.72
USE1-205ENST00000594724 PRKRIP1Q9H875 184 aaPredicted RBP19.58■□□□□ 0.72
USE1-205ENST00000594724 GYS1P13807 737 aa19.57■□□□□ 0.72
USE1-205ENST00000594724 PNNQ9H307 717 aaKnown RBP19.57■□□□□ 0.72
USE1-205ENST00000594724 SRP68Q9UHB9 627 aaKnown RBP19.57■□□□□ 0.72
USE1-205ENST00000594724 CICQ96RK0 1608 aaPredicted RBP19.57■□□□□ 0.72
USE1-205ENST00000594724 SIPA1L3O60292 1781 aaPredicted RBP19.57■□□□□ 0.72
USE1-205ENST00000594724 MMP10P09238 476 aa19.56■□□□□ 0.72
USE1-205ENST00000594724 NLGN1Q8N2Q7 840 aa19.56■□□□□ 0.72
USE1-205ENST00000594724 ZBTB1Q9Y2K1 713 aa19.56■□□□□ 0.72
USE1-205ENST00000594724 HEG1Q9ULI3 1381 aa19.56■□□□□ 0.72
USE1-205ENST00000594724 MAPK8IP3Q9UPT6 1336 aa19.55■□□□□ 0.72
USE1-205ENST00000594724 UBR2Q8IWV8 1755 aa19.55■□□□□ 0.72
USE1-205ENST00000594724 NFE2L2Q16236 605 aa19.55■□□□□ 0.72
USE1-205ENST00000594724 FMNL2Q96PY5 1086 aa19.55■□□□□ 0.72
USE1-205ENST00000594724 CD2APQ9Y5K6 639 aa19.55■□□□□ 0.72
USE1-205ENST00000594724 SOS1Q07889 1333 aaPredicted RBP19.54■□□□□ 0.72
USE1-205ENST00000594724 STARD3NLO95772 234 aa19.54■□□□□ 0.72
USE1-205ENST00000594724 CANXP27824 592 aaKnown RBP19.54■□□□□ 0.72
USE1-205ENST00000594724 GPR162Q16538 588 aa19.54■□□□□ 0.72
USE1-205ENST00000594724 PELP1Q8IZL8 1130 aaKnown RBP19.54■□□□□ 0.72
USE1-205ENST00000594724 ZNF316A6NFI3 1004 aaPredicted RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms