RNA–Protein interactions for RNA: ENST00000594216.1

RAB11B-202, Transcript of RAB11B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB11B, Length 894 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-202ENST00000594216 GNAT3A8MTJ3 354 aa20.49■□□□□ 0.87
RAB11B-202ENST00000594216 RBM42Q9BTD8 480 aaKnown RBP20.48■□□□□ 0.87
RAB11B-202ENST00000594216 PDGFDQ9GZP0 370 aaPredicted RBP20.48■□□□□ 0.87
RAB11B-202ENST00000594216 ATP6V1AP38606 617 aa20.47■□□□□ 0.87
RAB11B-202ENST00000594216 PNNQ9H307 717 aaKnown RBP20.47■□□□□ 0.87
RAB11B-202ENST00000594216 MRC1P22897 1456 aa20.45■□□□□ 0.86
RAB11B-202ENST00000594216 ZBTB7AO95365 584 aa20.45■□□□□ 0.86
RAB11B-202ENST00000594216 SPON1Q9HCB6 807 aa20.45■□□□□ 0.86
RAB11B-202ENST00000594216 SCN11AQ9UI33 1791 aa20.44■□□□□ 0.86
RAB11B-202ENST00000594216 PTCD1O75127 700 aaKnown RBP20.44■□□□□ 0.86
RAB11B-202ENST00000594216 TEFQ10587 303 aa20.44■□□□□ 0.86
RAB11B-202ENST00000594216 IL17REQ8NFR9 667 aa20.44■□□□□ 0.86
RAB11B-202ENST00000594216 RTF1Q92541 710 aaKnown RBP20.44■□□□□ 0.86
RAB11B-202ENST00000594216 AK7Q96M32 723 aa20.44■□□□□ 0.86
RAB11B-202ENST00000594216 LRP5O75197 1615 aa20.44■□□□□ 0.86
RAB11B-202ENST00000594216 MAPK8IP3Q9UPT6 1336 aa20.44■□□□□ 0.86
RAB11B-202ENST00000594216 C5P01031 1676 aa20.43■□□□□ 0.86
RAB11B-202ENST00000594216 ITPK1Q13572 414 aa20.43■□□□□ 0.86
RAB11B-202ENST00000594216 WDR43Q15061 677 aaKnown RBP eCLIP20.43■□□□□ 0.86
RAB11B-202ENST00000594216 LINC00116Q8NCU8 138 aa20.43■□□□□ 0.86
RAB11B-202ENST00000594216 PLEKHF1Q96S99 279 aa20.43■□□□□ 0.86
RAB11B-202ENST00000594216 PNPLA7Q6ZV29 1317 aa20.43■□□□□ 0.86
RAB11B-202ENST00000594216 CASZ1Q86V15 1759 aa20.42■□□□□ 0.86
RAB11B-202ENST00000594216 ADAMTS7Q9UKP4 1686 aa20.42■□□□□ 0.86
RAB11B-202ENST00000594216 MSH5O43196 834 aa20.41■□□□□ 0.86
RAB11B-202ENST00000594216 SLC39A6Q13433 755 aa20.41■□□□□ 0.86
RAB11B-202ENST00000594216 SLC4A9Q96Q91 983 aa20.41■□□□□ 0.86
RAB11B-202ENST00000594216 MTFR1LQ9H019 292 aa20.41■□□□□ 0.86
RAB11B-202ENST00000594216 ATF5Q9Y2D1 282 aaPredicted RBP20.41■□□□□ 0.86
RAB11B-202ENST00000594216 ANP32CO43423 234 aa20.4■□□□□ 0.86
RAB11B-202ENST00000594216 MCM10Q7L590 875 aa20.4■□□□□ 0.86
RAB11B-202ENST00000594216 CEMIPQ8WUJ3 1361 aa20.4■□□□□ 0.86
RAB11B-202ENST00000594216 C4BP0C0L5 1744 aa20.39■□□□□ 0.86
RAB11B-202ENST00000594216 HTATSF1O43719 755 aaKnown RBP20.38■□□□□ 0.85
RAB11B-202ENST00000594216 NFE2L2Q16236 605 aa20.38■□□□□ 0.85
RAB11B-202ENST00000594216 TTC5Q8N0Z6 440 aa20.38■□□□□ 0.85
RAB11B-202ENST00000594216 PPP1R1BQ9UD71 204 aaPredicted RBP20.38■□□□□ 0.85
RAB11B-202ENST00000594216 GNPATO15228 680 aa20.37■□□□□ 0.85
RAB11B-202ENST00000594216 PHF14O94880 888 aa20.37■□□□□ 0.85
RAB11B-202ENST00000594216 DCTN1Q14203 1278 aa20.37■□□□□ 0.85
RAB11B-202ENST00000594216 COL23A1Q86Y22 540 aaPredicted RBP20.37■□□□□ 0.85
RAB11B-202ENST00000594216 FLAD1Q8NFF5 587 aa20.37■□□□□ 0.85
RAB11B-202ENST00000594216 SLC16A10Q8TF71 515 aa20.37■□□□□ 0.85
RAB11B-202ENST00000594216 TAF1LQ8IZX4 1826 aa20.35■□□□□ 0.85
RAB11B-202ENST00000594216 BTBD11A6QL63 1104 aa20.35■□□□□ 0.85
RAB11B-202ENST00000594216 ZNF790Q6PG37 636 aa20.35■□□□□ 0.85
RAB11B-202ENST00000594216 CCDC146Q8IYE0 955 aa20.35■□□□□ 0.85
RAB11B-202ENST00000594216 ADAMTS8Q9UP79 889 aa20.35■□□□□ 0.85
RAB11B-202ENST00000594216 QSER1Q2KHR3 1735 aa20.35■□□□□ 0.85
RAB11B-202ENST00000594216 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.34■□□□□ 0.85
RAB11B-202ENST00000594216 SSFA2P28290 1259 aa20.34■□□□□ 0.85
RAB11B-202ENST00000594216 PTGER2P43116 358 aa20.34■□□□□ 0.85
RAB11B-202ENST00000594216 AMIGO3Q86WK7 504 aa20.34■□□□□ 0.85
RAB11B-202ENST00000594216 ZNF831Q5JPB2 1677 aa20.34■□□□□ 0.85
RAB11B-202ENST00000594216 KCPQ6ZWJ8 1503 aa20.33■□□□□ 0.85
RAB11B-202ENST00000594216 CNTNAP4Q9C0A0 1308 aa20.33■□□□□ 0.85
RAB11B-202ENST00000594216 TUBGCP6Q96RT7 1819 aa20.33■□□□□ 0.85
RAB11B-202ENST00000594216 RC3H1Q5TC82 1133 aaKnown RBP20.33■□□□□ 0.85
RAB11B-202ENST00000594216 SMIM5Q71RC9 77 aa20.33■□□□□ 0.85
RAB11B-202ENST00000594216 RTCBQ9Y3I0 505 aaKnown RBP20.33■□□□□ 0.85
RAB11B-202ENST00000594216 DNAJC10Q8IXB1 793 aa20.32■□□□□ 0.84
RAB11B-202ENST00000594216 VSIG10Q8N0Z9 540 aa20.32■□□□□ 0.84
RAB11B-202ENST00000594216 RUNDC1Q96C34 613 aa20.32■□□□□ 0.84
RAB11B-202ENST00000594216 POLD1P28340 1107 aa20.31■□□□□ 0.84
RAB11B-202ENST00000594216 CRKLP46109 303 aaKnown RBP20.31■□□□□ 0.84
RAB11B-202ENST00000594216 RIPK4P57078 832 aa20.31■□□□□ 0.84
RAB11B-202ENST00000594216 ZNF496Q96IT1 587 aaPredicted RBP20.31■□□□□ 0.84
RAB11B-202ENST00000594216 VIRMAQ69YN4 1812 aaKnown RBP20.31■□□□□ 0.84
RAB11B-202ENST00000594216 FMNL2Q96PY5 1086 aa20.3■□□□□ 0.84
RAB11B-202ENST00000594216 SGIP1Q9BQI5 828 aa20.3■□□□□ 0.84
RAB11B-202ENST00000594216 TMPOP42166 694 aaKnown RBP20.29■□□□□ 0.84
RAB11B-202ENST00000594216 TAF7Q15545 349 aaPredicted RBP20.29■□□□□ 0.84
RAB11B-202ENST00000594216 CCDC184Q52MB2 194 aa20.29■□□□□ 0.84
RAB11B-202ENST00000594216 TRAPPC3LQ5T215 181 aa20.29■□□□□ 0.84
RAB11B-202ENST00000594216 MSL1Q68DK7 614 aa20.29■□□□□ 0.84
RAB11B-202ENST00000594216 THUMPD2Q9BTF0 503 aaKnown RBP20.29■□□□□ 0.84
RAB11B-202ENST00000594216 RRP7AQ9Y3A4 280 aaKnown RBP20.29■□□□□ 0.84
RAB11B-202ENST00000594216 COL5A3P25940 1745 aaPredicted RBP20.28■□□□□ 0.84
RAB11B-202ENST00000594216 TJP1Q07157 1748 aa20.28■□□□□ 0.84
RAB11B-202ENST00000594216 KCNQ3O43525 872 aa20.28■□□□□ 0.84
RAB11B-202ENST00000594216 RPS6KA4O75676 772 aa20.28■□□□□ 0.84
RAB11B-202ENST00000594216 CYP19A1P11511 503 aaPredicted RBP20.28■□□□□ 0.84
RAB11B-202ENST00000594216 LMOD3Q0VAK6 560 aa20.28■□□□□ 0.84
RAB11B-202ENST00000594216 NEUROD2Q15784 382 aa20.28■□□□□ 0.84
RAB11B-202ENST00000594216 HEG1Q9ULI3 1381 aa20.28■□□□□ 0.84
RAB11B-202ENST00000594216 SIPA1L3O60292 1781 aaPredicted RBP20.28■□□□□ 0.84
RAB11B-202ENST00000594216 CICQ96RK0 1608 aaPredicted RBP20.27■□□□□ 0.84
RAB11B-202ENST00000594216 ADRA2BP18089 450 aa20.27■□□□□ 0.84
RAB11B-202ENST00000594216 ARXQ96QS3 562 aa20.27■□□□□ 0.84
RAB11B-202ENST00000594216 MRS2Q9HD23 443 aa20.27■□□□□ 0.84
RAB11B-202ENST00000594216 CCDC87Q9NVE4 849 aa20.27■□□□□ 0.84
RAB11B-202ENST00000594216 UBR3Q6ZT12 1888 aa20.26■□□□□ 0.83
RAB11B-202ENST00000594216 STARD3NLO95772 234 aa20.26■□□□□ 0.83
RAB11B-202ENST00000594216 INTS5Q6P9B9 1019 aaKnown RBP20.26■□□□□ 0.83
RAB11B-202ENST00000594216 PNISRQ8TF01 805 aaKnown RBP20.26■□□□□ 0.83
RAB11B-202ENST00000594216 TEX13AQ9BXU3 409 aaPredicted RBP20.26■□□□□ 0.83
RAB11B-202ENST00000594216 UBR2Q8IWV8 1755 aa20.26■□□□□ 0.83
RAB11B-202ENST00000594216 RFC4P35249 363 aa20.25■□□□□ 0.83
RAB11B-202ENST00000594216 ARHGEF1Q92888 912 aaKnown RBP20.25■□□□□ 0.83
RAB11B-202ENST00000594216 MIS18AQ9NYP9 233 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms