RNA–Protein interactions for RNA: ENST00000593609.1

ARHGEF1-205, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-205ENST00000593609 VIRMAQ69YN4 1812 aaKnown RBP24.6■■□□□ 1.53
ARHGEF1-205ENST00000593609 SIPA1L3O60292 1781 aaPredicted RBP24.59■■□□□ 1.53
ARHGEF1-205ENST00000593609 CHL1O00533 1208 aa24.59■■□□□ 1.53
ARHGEF1-205ENST00000593609 ZNF853P0CG23 659 aa24.59■■□□□ 1.53
ARHGEF1-205ENST00000593609 YTHDC1Q96MU7 727 aaKnown RBP24.59■■□□□ 1.53
ARHGEF1-205ENST00000593609 PIGBQ92521 554 aa24.58■■□□□ 1.53
ARHGEF1-205ENST00000593609 SYTL4Q96C24 671 aaPredicted RBP24.58■■□□□ 1.53
ARHGEF1-205ENST00000593609 ACSBG1Q96GR2 724 aa24.58■■□□□ 1.53
ARHGEF1-205ENST00000593609 BCL11BQ9C0K0 894 aaPredicted RBP24.58■■□□□ 1.53
ARHGEF1-205ENST00000593609 E9PSI1 815 aa24.57■■□□□ 1.52
ARHGEF1-205ENST00000593609 MYH16Q9H6N6 1097 aa24.57■■□□□ 1.52
ARHGEF1-205ENST00000593609 BTBD11A6QL63 1104 aa24.56■■□□□ 1.52
ARHGEF1-205ENST00000593609 KCNQ2O43526 872 aa24.56■■□□□ 1.52
ARHGEF1-205ENST00000593609 ITGB4P16144 1822 aa24.56■■□□□ 1.52
ARHGEF1-205ENST00000593609 SBF2Q86WG5 1849 aa24.56■■□□□ 1.52
ARHGEF1-205ENST00000593609 TSPYL4Q9UJ04 414 aa24.54■■□□□ 1.52
ARHGEF1-205ENST00000593609 SLFN5Q08AF3 891 aa24.53■■□□□ 1.52
ARHGEF1-205ENST00000593609 SMARCC1Q92922 1105 aaPredicted RBP24.53■■□□□ 1.52
ARHGEF1-205ENST00000593609 ZNF790Q6PG37 636 aa24.52■■□□□ 1.52
ARHGEF1-205ENST00000593609 MBIPQ9NS73 344 aa24.52■■□□□ 1.52
ARHGEF1-205ENST00000593609 LAS1LQ9Y4W2 734 aaKnown RBP24.52■■□□□ 1.52
ARHGEF1-205ENST00000593609 PAPPAQ13219 1627 aa24.52■■□□□ 1.52
ARHGEF1-205ENST00000593609 TRIM37O94972 964 aa24.51■■□□□ 1.51
ARHGEF1-205ENST00000593609 TRMT2AQ8IZ69 625 aaKnown RBP24.51■■□□□ 1.51
ARHGEF1-205ENST00000593609 TTC5Q8N0Z6 440 aa24.51■■□□□ 1.51
ARHGEF1-205ENST00000593609 SPINK5Q9NQ38 1064 aaPredicted RBP24.51■■□□□ 1.51
ARHGEF1-205ENST00000593609 KDM3BQ7LBC6 1761 aa24.5■■□□□ 1.51
ARHGEF1-205ENST00000593609 CDCA7LQ96GN5 454 aa24.5■■□□□ 1.51
ARHGEF1-205ENST00000593609 ATG3Q9NT62 314 aa24.5■■□□□ 1.51
ARHGEF1-205ENST00000593609 MIS18AQ9NYP9 233 aa24.5■■□□□ 1.51
ARHGEF1-205ENST00000593609 FANCIQ9NVI1 1328 aa24.5■■□□□ 1.51
ARHGEF1-205ENST00000593609 EP400Q96L91 3159 aa24.48■■□□□ 1.51
ARHGEF1-205ENST00000593609 PTF1AQ7RTS3 328 aa24.48■■□□□ 1.51
ARHGEF1-205ENST00000593609 KAT6BQ8WYB5 2073 aa24.48■■□□□ 1.51
ARHGEF1-205ENST00000593609 ASAP1Q9ULH1 1129 aa24.48■■□□□ 1.51
ARHGEF1-205ENST00000593609 BTAF1O14981 1849 aa24.47■■□□□ 1.51
ARHGEF1-205ENST00000593609 SLC39A6Q13433 755 aa24.47■■□□□ 1.51
ARHGEF1-205ENST00000593609 TSR2Q969E8 191 aaKnown RBP24.47■■□□□ 1.51
ARHGEF1-205ENST00000593609 PALLDQ8WX93 1383 aa24.46■■□□□ 1.51
ARHGEF1-205ENST00000593609 EIF4A1P60842 406 aaKnown RBP24.46■■□□□ 1.51
ARHGEF1-205ENST00000593609 FMNL2Q96PY5 1086 aa24.46■■□□□ 1.51
ARHGEF1-205ENST00000593609 UBR2Q8IWV8 1755 aa24.46■■□□□ 1.51
ARHGEF1-205ENST00000593609 KCPQ6ZWJ8 1503 aa24.45■■□□□ 1.51
ARHGEF1-205ENST00000593609 HEG1Q9ULI3 1381 aa24.45■■□□□ 1.5
ARHGEF1-205ENST00000593609 SOS1Q07889 1333 aaPredicted RBP24.45■■□□□ 1.5
ARHGEF1-205ENST00000593609 KCNQ3O43525 872 aa24.45■■□□□ 1.5
ARHGEF1-205ENST00000593609 DUSP27Q5VZP5 1158 aa24.45■■□□□ 1.5
ARHGEF1-205ENST00000593609 CCDC125Q86Z20 511 aa24.45■■□□□ 1.5
ARHGEF1-205ENST00000593609 VSIG10Q8N0Z9 540 aa24.44■■□□□ 1.5
ARHGEF1-205ENST00000593609 ZNF496Q96IT1 587 aaPredicted RBP24.43■■□□□ 1.5
ARHGEF1-205ENST00000593609 TNS1Q9HBL0 1735 aaKnown RBP24.43■■□□□ 1.5
ARHGEF1-205ENST00000593609 PLSCR1O15162 318 aa24.42■■□□□ 1.5
ARHGEF1-205ENST00000593609 HOXB7P09629 217 aa24.42■■□□□ 1.5
ARHGEF1-205ENST00000593609 ZNF831Q5JPB2 1677 aa24.4■■□□□ 1.5
ARHGEF1-205ENST00000593609 PTCD1O75127 700 aaKnown RBP24.4■■□□□ 1.5
ARHGEF1-205ENST00000593609 APBA3O96018 575 aa24.4■■□□□ 1.5
ARHGEF1-205ENST00000593609 SNRPA1P09661 255 aaKnown RBP24.4■■□□□ 1.5
ARHGEF1-205ENST00000593609 SF3B2Q13435 895 aaKnown RBP24.4■■□□□ 1.5
ARHGEF1-205ENST00000593609 CICQ96RK0 1608 aaPredicted RBP24.39■■□□□ 1.5
ARHGEF1-205ENST00000593609 LOC102724428A0A0B4J2F2 783 aa24.39■■□□□ 1.49
ARHGEF1-205ENST00000593609 CT47B1P0C2W7 299 aaPredicted RBP24.39■■□□□ 1.49
ARHGEF1-205ENST00000593609 HMGB2P26583 209 aaKnown RBP24.39■■□□□ 1.49
ARHGEF1-205ENST00000593609 SIK1P57059 783 aa24.39■■□□□ 1.49
ARHGEF1-205ENST00000593609 EXOSC9Q06265 439 aaKnown RBP24.39■■□□□ 1.49
ARHGEF1-205ENST00000593609 TEX13AQ9BXU3 409 aaPredicted RBP24.39■■□□□ 1.49
ARHGEF1-205ENST00000593609 CHMP4AQ9BY43 222 aa24.39■■□□□ 1.49
ARHGEF1-205ENST00000593609 RGPD3A6NKT7 1758 aaPredicted RBP24.39■■□□□ 1.49
ARHGEF1-205ENST00000593609 RGPD4Q7Z3J3 1758 aa24.39■■□□□ 1.49
ARHGEF1-205ENST00000593609 GIGYF1O75420 1035 aaPredicted RBP24.38■■□□□ 1.49
ARHGEF1-205ENST00000593609 C8orf58Q8NAV2 365 aa24.38■■□□□ 1.49
ARHGEF1-205ENST00000593609 RBM42Q9BTD8 480 aaKnown RBP24.38■■□□□ 1.49
ARHGEF1-205ENST00000593609 SLC27A3Q5K4L6 730 aa24.37■■□□□ 1.49
ARHGEF1-205ENST00000593609 LY75O60449 1722 aa24.37■■□□□ 1.49
ARHGEF1-205ENST00000593609 ILDR2Q71H61 639 aa24.36■■□□□ 1.49
ARHGEF1-205ENST00000593609 ZNF428Q96B54 188 aa24.36■■□□□ 1.49
ARHGEF1-205ENST00000593609 SLC4A9Q96Q91 983 aa24.36■■□□□ 1.49
ARHGEF1-205ENST00000593609 BAG6P46379 1132 aa24.35■■□□□ 1.49
ARHGEF1-205ENST00000593609 TWISTNBQ3B726 338 aaPredicted RBP24.35■■□□□ 1.49
ARHGEF1-205ENST00000593609 KRT24Q2M2I5 525 aa24.34■■□□□ 1.49
ARHGEF1-205ENST00000593609 ATP6V1AP38606 617 aa24.33■■□□□ 1.49
ARHGEF1-205ENST00000593609 TSPYL6Q8N831 410 aa24.33■■□□□ 1.49
ARHGEF1-205ENST00000593609 CCNL1Q9UK58 526 aaPredicted RBP24.33■■□□□ 1.49
ARHGEF1-205ENST00000593609 VAMP4O75379 141 aa24.32■■□□□ 1.48
ARHGEF1-205ENST00000593609 TXNRD1Q16881 649 aa24.32■■□□□ 1.48
ARHGEF1-205ENST00000593609 STARD3NLO95772 234 aa24.31■■□□□ 1.48
ARHGEF1-205ENST00000593609 DNAJC10Q8IXB1 793 aa24.31■■□□□ 1.48
ARHGEF1-205ENST00000593609 UPF1Q92900 1129 aaKnown RBP eCLIP24.31■■□□□ 1.484e-11■■■□□ 16.4
ARHGEF1-205ENST00000593609 TJP1Q07157 1748 aa24.3■■□□□ 1.48
ARHGEF1-205ENST00000593609 ELL2O00472 640 aaPredicted RBP24.3■■□□□ 1.48
ARHGEF1-205ENST00000593609 ITPK1Q13572 414 aa24.3■■□□□ 1.48
ARHGEF1-205ENST00000593609 CAMKK2Q96RR4 588 aa24.3■■□□□ 1.48
ARHGEF1-205ENST00000593609 ERBB4Q15303 1308 aa24.3■■□□□ 1.48
ARHGEF1-205ENST00000593609 LAMB4A4D0S4 1761 aa24.29■■□□□ 1.48
ARHGEF1-205ENST00000593609 HDGFL1Q5TGJ6 251 aa24.29■■□□□ 1.48
ARHGEF1-205ENST00000593609 C5P01031 1676 aa24.28■■□□□ 1.48
ARHGEF1-205ENST00000593609 PRAMEF22A3QJZ6 481 aa24.28■■□□□ 1.48
ARHGEF1-205ENST00000593609 CYP19A1P11511 503 aaPredicted RBP24.28■■□□□ 1.48
ARHGEF1-205ENST00000593609 PROM2Q8N271 834 aa24.28■■□□□ 1.48
ARHGEF1-205ENST00000593609 USP16Q9Y5T5 823 aa24.28■■□□□ 1.48
ARHGEF1-205ENST00000593609 CCDC30Q5VVM6 783 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms