RNA–Protein interactions for RNA: ENST00000593361.5

DDX49-202, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-202ENST00000593361 NCBP3Q53F19 620 aaKnown RBP16.96■□□□□ 0.31
DDX49-202ENST00000593361 PTF1AQ7RTS3 328 aa16.96■□□□□ 0.31
DDX49-202ENST00000593361 NGEFQ8N5V2 710 aa16.96■□□□□ 0.31
DDX49-202ENST00000593361 BCL11BQ9C0K0 894 aaPredicted RBP16.96■□□□□ 0.31
DDX49-202ENST00000593361 NFATC2IPQ8NCF5 419 aa16.95■□□□□ 0.3
DDX49-202ENST00000593361 PIGBQ92521 554 aa16.95■□□□□ 0.3
DDX49-202ENST00000593361 KDM3BQ7LBC6 1761 aa16.94■□□□□ 0.3
DDX49-202ENST00000593361 HNRNPUQ00839 825 aaKnown RBP eCLIP16.94■□□□□ 0.3
DDX49-202ENST00000593361 WWC1Q8IX03 1113 aa16.94■□□□□ 0.3
DDX49-202ENST00000593361 RGPD3A6NKT7 1758 aaPredicted RBP16.93■□□□□ 0.3
DDX49-202ENST00000593361 RGPD4Q7Z3J3 1758 aa16.93■□□□□ 0.3
DDX49-202ENST00000593361 UBR2Q8IWV8 1755 aa16.93■□□□□ 0.3
DDX49-202ENST00000593361 CALD1Q05682 793 aaKnown RBP16.92■□□□□ 0.3
DDX49-202ENST00000593361 LY75O60449 1722 aa16.91■□□□□ 0.3
DDX49-202ENST00000593361 ZNF521Q96K83 1311 aa16.91■□□□□ 0.3
DDX49-202ENST00000593361 BTBD11A6QL63 1104 aa16.9■□□□□ 0.3
DDX49-202ENST00000593361 SF3B2Q13435 895 aaKnown RBP16.9■□□□□ 0.3
DDX49-202ENST00000593361 TAF7Q15545 349 aaPredicted RBP16.9■□□□□ 0.3
DDX49-202ENST00000593361 ASAP1Q9ULH1 1129 aa16.9■□□□□ 0.3
DDX49-202ENST00000593361 KCPQ6ZWJ8 1503 aa16.9■□□□□ 0.3
DDX49-202ENST00000593361 PALLDQ8WX93 1383 aa16.89■□□□□ 0.3
DDX49-202ENST00000593361 APBA3O96018 575 aa16.89■□□□□ 0.29
DDX49-202ENST00000593361 SLC39A6Q13433 755 aa16.89■□□□□ 0.29
DDX49-202ENST00000593361 ATG3Q9NT62 314 aa16.89■□□□□ 0.29
DDX49-202ENST00000593361 WDR63Q8IWG1 891 aa16.88■□□□□ 0.29
DDX49-202ENST00000593361 UPF1Q92900 1129 aaKnown RBP eCLIP16.88■□□□□ 0.29
DDX49-202ENST00000593361 SMARCC1Q92922 1105 aaPredicted RBP16.88■□□□□ 0.29
DDX49-202ENST00000593361 IFT57Q9NWB7 429 aa16.88■□□□□ 0.29
DDX49-202ENST00000593361 MIS18AQ9NYP9 233 aa16.88■□□□□ 0.29
DDX49-202ENST00000593361 TSPYL4Q9UJ04 414 aa16.88■□□□□ 0.29
DDX49-202ENST00000593361 LAS1LQ9Y4W2 734 aaKnown RBP16.88■□□□□ 0.29
DDX49-202ENST00000593361 IL16Q14005 1332 aa16.88■□□□□ 0.29
DDX49-202ENST00000593361 ZNF790Q6PG37 636 aa16.87■□□□□ 0.29
DDX49-202ENST00000593361 CCDC125Q86Z20 511 aa16.87■□□□□ 0.29
DDX49-202ENST00000593361 TTC5Q8N0Z6 440 aa16.87■□□□□ 0.29
DDX49-202ENST00000593361 CFAP44Q96MT7 982 aa16.87■□□□□ 0.29
DDX49-202ENST00000593361 ZBED9Q6R2W3 1325 aa16.87■□□□□ 0.29
DDX49-202ENST00000593361 RREB1Q92766 1687 aa16.86■□□□□ 0.29
DDX49-202ENST00000593361 CHL1O00533 1208 aa16.86■□□□□ 0.29
DDX49-202ENST00000593361 BAG6P46379 1132 aa16.86■□□□□ 0.29
DDX49-202ENST00000593361 GNAI1P63096 354 aa16.86■□□□□ 0.29
DDX49-202ENST00000593361 BABAM1Q9NWV8 329 aa16.86■□□□□ 0.29
DDX49-202ENST00000593361 CICQ96RK0 1608 aaPredicted RBP16.85■□□□□ 0.29
DDX49-202ENST00000593361 ZNF831Q5JPB2 1677 aa16.85■□□□□ 0.29
DDX49-202ENST00000593361 TJP1Q07157 1748 aa16.85■□□□□ 0.29
DDX49-202ENST00000593361 KCNQ3O43525 872 aa16.85■□□□□ 0.29
DDX49-202ENST00000593361 ZNF853P0CG23 659 aa16.85■□□□□ 0.29
DDX49-202ENST00000593361 C5P01031 1676 aa16.85■□□□□ 0.29
DDX49-202ENST00000593361 PLSCR1O15162 318 aa16.84■□□□□ 0.29
DDX49-202ENST00000593361 PTCD1O75127 700 aaKnown RBP16.84■□□□□ 0.29
DDX49-202ENST00000593361 GOLGA2Q08379 1002 aa16.84■□□□□ 0.29
DDX49-202ENST00000593361 MBIPQ9NS73 344 aa16.84■□□□□ 0.29
DDX49-202ENST00000593361 TAF1LQ8IZX4 1826 aa16.84■□□□□ 0.29
DDX49-202ENST00000593361 LOC102724428A0A0B4J2F2 783 aa16.83■□□□□ 0.28
DDX49-202ENST00000593361 LAMB4A4D0S4 1761 aa16.83■□□□□ 0.28
DDX49-202ENST00000593361 SIK1P57059 783 aa16.83■□□□□ 0.28
DDX49-202ENST00000593361 DEFB132Q7Z7B7 95 aa16.83■□□□□ 0.28
DDX49-202ENST00000593361 TSR2Q969E8 191 aaKnown RBP16.83■□□□□ 0.28
DDX49-202ENST00000593361 ZNF496Q96IT1 587 aaPredicted RBP16.83■□□□□ 0.28
DDX49-202ENST00000593361 RBM42Q9BTD8 480 aaKnown RBP16.83■□□□□ 0.28
DDX49-202ENST00000593361 SPINK5Q9NQ38 1064 aaPredicted RBP16.83■□□□□ 0.28
DDX49-202ENST00000593361 COL5A3P25940 1745 aaPredicted RBP16.82■□□□□ 0.28
DDX49-202ENST00000593361 NUP188Q5SRE5 1749 aa16.82■□□□□ 0.28
DDX49-202ENST00000593361 FANCIQ9NVI1 1328 aa16.82■□□□□ 0.28
DDX49-202ENST00000593361 EN1Q05925 392 aaPredicted RBP16.82■□□□□ 0.28
DDX49-202ENST00000593361 FMNL2Q96PY5 1086 aa16.82■□□□□ 0.28
DDX49-202ENST00000593361 HEG1Q9ULI3 1381 aa16.81■□□□□ 0.28
DDX49-202ENST00000593361 CAMKK2Q96RR4 588 aa16.81■□□□□ 0.28
DDX49-202ENST00000593361 MYH16Q9H6N6 1097 aa16.81■□□□□ 0.28
DDX49-202ENST00000593361 CCNL1Q9UK58 526 aaPredicted RBP16.81■□□□□ 0.28
DDX49-202ENST00000593361 E9PSI1 815 aa16.8■□□□□ 0.28
DDX49-202ENST00000593361 EIF4A1P60842 406 aaKnown RBP16.8■□□□□ 0.28
DDX49-202ENST00000593361 EZH2Q15910 746 aaKnown RBP16.8■□□□□ 0.28
DDX49-202ENST00000593361 TXNRD1Q16881 649 aa16.8■□□□□ 0.28
DDX49-202ENST00000593361 CDCA7LQ96GN5 454 aa16.8■□□□□ 0.28
DDX49-202ENST00000593361 SLC4A9Q96Q91 983 aa16.8■□□□□ 0.28
DDX49-202ENST00000593361 ATP6V1AP38606 617 aa16.79■□□□□ 0.28
DDX49-202ENST00000593361 KCNQ4P56696 695 aa16.79■□□□□ 0.28
DDX49-202ENST00000593361 SLC27A3Q5K4L6 730 aa16.79■□□□□ 0.28
DDX49-202ENST00000593361 SLFN5Q08AF3 891 aa16.78■□□□□ 0.28
DDX49-202ENST00000593361 ITPK1Q13572 414 aa16.78■□□□□ 0.28
DDX49-202ENST00000593361 KRT24Q2M2I5 525 aa16.78■□□□□ 0.28
DDX49-202ENST00000593361 VSIG10Q8N0Z9 540 aa16.78■□□□□ 0.28
DDX49-202ENST00000593361 PROM2Q8N271 834 aa16.78■□□□□ 0.28
DDX49-202ENST00000593361 LRRC4BQ9NT99 713 aa16.78■□□□□ 0.28
DDX49-202ENST00000593361 C4BP0C0L5 1744 aa16.78■□□□□ 0.28
DDX49-202ENST00000593361 PRAMEF22A3QJZ6 481 aa16.76■□□□□ 0.27
DDX49-202ENST00000593361 GIGYF1O75420 1035 aaPredicted RBP16.76■□□□□ 0.27
DDX49-202ENST00000593361 SNRPA1P09661 255 aaKnown RBP16.76■□□□□ 0.27
DDX49-202ENST00000593361 DNAJC10Q8IXB1 793 aa16.76■□□□□ 0.27
DDX49-202ENST00000593361 MYH14Q7Z406 1995 aaKnown RBP16.76■□□□□ 0.27
DDX49-202ENST00000593361 LINC00116Q8NCU8 138 aa16.75■□□□□ 0.27
DDX49-202ENST00000593361 SOCS7O14512 581 aa16.74■□□□□ 0.27
DDX49-202ENST00000593361 EXOSC9Q06265 439 aaKnown RBP16.74■□□□□ 0.27
DDX49-202ENST00000593361 DUSP27Q5VZP5 1158 aa16.74■□□□□ 0.27
DDX49-202ENST00000593361 TRMT2AQ8IZ69 625 aaKnown RBP16.74■□□□□ 0.27
DDX49-202ENST00000593361 C8orf58Q8NAV2 365 aa16.74■□□□□ 0.27
DDX49-202ENST00000593361 TUBGCP6Q96RT7 1819 aa16.74■□□□□ 0.27
DDX49-202ENST00000593361 HOXB7P09629 217 aa16.73■□□□□ 0.27
DDX49-202ENST00000593361 TEX13AQ9BXU3 409 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms