RNA–Protein interactions for RNA: ENST00000593013.5

HDAC5-212, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 1,745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-212ENST00000593013 CARD10Q9BWT7 1032 aa23.74■■□□□ 1.39
HDAC5-212ENST00000593013 NOP58Q9Y2X3 529 aaKnown RBP23.74■■□□□ 1.39
HDAC5-212ENST00000593013 AFF2P51816 1311 aa23.73■■□□□ 1.39
HDAC5-212ENST00000593013 TOM1L2Q6ZVM7 507 aa23.73■■□□□ 1.39
HDAC5-212ENST00000593013 MCM10Q7L590 875 aa23.73■■□□□ 1.39
HDAC5-212ENST00000593013 CHMP4BQ9H444 224 aaKnown RBP23.73■■□□□ 1.39
HDAC5-212ENST00000593013 UNC5CLQ8IV45 518 aa23.73■■□□□ 1.39
HDAC5-212ENST00000593013 PDZRN3Q9UPQ7 1066 aa23.72■■□□□ 1.39
HDAC5-212ENST00000593013 API5Q9BZZ5 524 aaKnown RBP23.71■■□□□ 1.39
HDAC5-212ENST00000593013 ERICH6Q7L0X2 663 aa23.7■■□□□ 1.38
HDAC5-212ENST00000593013 ELL2O00472 640 aaPredicted RBP23.69■■□□□ 1.38
HDAC5-212ENST00000593013 SMC5Q8IY18 1101 aa23.68■■□□□ 1.38
HDAC5-212ENST00000593013 RTF1Q92541 710 aaKnown RBP23.68■■□□□ 1.38
HDAC5-212ENST00000593013 USP21Q9UK80 565 aa23.67■■□□□ 1.38
HDAC5-212ENST00000593013 ZBTB7BO15156 539 aaPredicted RBP23.67■■□□□ 1.38
HDAC5-212ENST00000593013 SPATA31A1Q5TZJ5 1347 aa23.66■■□□□ 1.38
HDAC5-212ENST00000593013 RGS12O14924 1447 aa23.66■■□□□ 1.38
HDAC5-212ENST00000593013 NPM2Q86SE8 214 aaKnown RBP23.66■■□□□ 1.38
HDAC5-212ENST00000593013 SPATA31A5Q5VU36 1347 aa23.66■■□□□ 1.38
HDAC5-212ENST00000593013 SPATA31A7Q8IWB4 1347 aa23.66■■□□□ 1.38
HDAC5-212ENST00000593013 MEGF6O75095 1541 aa23.66■■□□□ 1.38
HDAC5-212ENST00000593013 MAP3K5Q99683 1374 aa23.65■■□□□ 1.38
HDAC5-212ENST00000593013 VPS72Q15906 364 aa23.65■■□□□ 1.38
HDAC5-212ENST00000593013 USP35Q9P2H5 1018 aa23.64■■□□□ 1.38
HDAC5-212ENST00000593013 PLEKHG2Q9H7P9 1386 aa23.64■■□□□ 1.37
HDAC5-212ENST00000593013 MYT1Q01538 1121 aa23.64■■□□□ 1.37
HDAC5-212ENST00000593013 RAPGEF4Q8WZA2 1011 aa23.64■■□□□ 1.37
HDAC5-212ENST00000593013 GNAT3A8MTJ3 354 aa23.63■■□□□ 1.37
HDAC5-212ENST00000593013 ZNF772Q68DY9 489 aaPredicted RBP23.63■■□□□ 1.37
HDAC5-212ENST00000593013 BABAM1Q9NWV8 329 aa23.63■■□□□ 1.37
HDAC5-212ENST00000593013 ZBTB47Q9UFB7 747 aaPredicted RBP23.63■■□□□ 1.37
HDAC5-212ENST00000593013 CACNA1FO60840 1977 aa23.62■■□□□ 1.37
HDAC5-212ENST00000593013 PTPRCP08575 1304 aa23.62■■□□□ 1.37
HDAC5-212ENST00000593013 DISP2A7MBM2 1401 aa23.62■■□□□ 1.37
HDAC5-212ENST00000593013 DDRGK1Q96HY6 314 aa23.62■■□□□ 1.37
HDAC5-212ENST00000593013 RGS17Q9UGC6 210 aaPredicted RBP23.62■■□□□ 1.37
HDAC5-212ENST00000593013 THRAP3Q9Y2W1 955 aaKnown RBP23.62■■□□□ 1.37
HDAC5-212ENST00000593013 OVOS2A0A0G2JMS6 1433 aa23.61■■□□□ 1.37
HDAC5-212ENST00000593013 ATRNO75882 1429 aa23.61■■□□□ 1.37
HDAC5-212ENST00000593013 IL2RBP14784 551 aa23.61■■□□□ 1.37
HDAC5-212ENST00000593013 TATP17735 454 aaPredicted RBP23.61■■□□□ 1.37
HDAC5-212ENST00000593013 KRT24Q2M2I5 525 aa23.61■■□□□ 1.37
HDAC5-212ENST00000593013 TSPYL4Q9UJ04 414 aa23.61■■□□□ 1.37
HDAC5-212ENST00000593013 PARP4Q9UKK3 1724 aaKnown RBP23.61■■□□□ 1.37
HDAC5-212ENST00000593013 SOS1Q07889 1333 aaPredicted RBP23.61■■□□□ 1.37
HDAC5-212ENST00000593013 INTS3Q68E01 1043 aaKnown RBP23.6■■□□□ 1.37
HDAC5-212ENST00000593013 WNK3Q9BYP7 1800 aa23.6■■□□□ 1.37
HDAC5-212ENST00000593013 PKD1L3Q7Z443 1732 aa23.6■■□□□ 1.37
HDAC5-212ENST00000593013 AMOTQ4VCS5 1084 aa23.59■■□□□ 1.37
HDAC5-212ENST00000593013 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.59■■□□□ 1.37
HDAC5-212ENST00000593013 TRPC5Q9UL62 973 aaPredicted RBP23.59■■□□□ 1.37
HDAC5-212ENST00000593013 PLEKHO1Q53GL0 409 aaPredicted RBP23.58■■□□□ 1.37
HDAC5-212ENST00000593013 BARGINQ6ZT62 677 aa23.58■■□□□ 1.37
HDAC5-212ENST00000593013 CCDC9Q9Y3X0 531 aaKnown RBP23.58■■□□□ 1.37
HDAC5-212ENST00000593013 N4BP2Q86UW6 1770 aaPredicted RBP23.57■■□□□ 1.36
HDAC5-212ENST00000593013 CEMIPQ8WUJ3 1361 aa23.57■■□□□ 1.36
HDAC5-212ENST00000593013 GLI3P10071 1580 aa23.56■■□□□ 1.36
HDAC5-212ENST00000593013 KDM3BQ7LBC6 1761 aa23.56■■□□□ 1.36
HDAC5-212ENST00000593013 NUCB1Q02818 461 aa23.56■■□□□ 1.36
HDAC5-212ENST00000593013 QTRT2Q9H974 415 aaKnown RBP23.56■■□□□ 1.36
HDAC5-212ENST00000593013 IL17REQ8NFR9 667 aa23.55■■□□□ 1.36
HDAC5-212ENST00000593013 GJD4Q96KN9 370 aaPredicted RBP23.55■■□□□ 1.36
HDAC5-212ENST00000593013 GCC1Q96CN9 775 aa23.54■■□□□ 1.36
HDAC5-212ENST00000593013 MIS18AQ9NYP9 233 aa23.54■■□□□ 1.36
HDAC5-212ENST00000593013 SHANK3Q9BYB0 1731 aa23.54■■□□□ 1.36
HDAC5-212ENST00000593013 POTEAQ6S8J7 498 aa23.53■■□□□ 1.36
HDAC5-212ENST00000593013 ZCRB1Q8TBF4 217 aaKnown RBP23.53■■□□□ 1.36
HDAC5-212ENST00000593013 CDCA7Q9BWT1 371 aaPredicted RBP23.53■■□□□ 1.36
HDAC5-212ENST00000593013 SPG7Q9UQ90 795 aa23.53■■□□□ 1.36
HDAC5-212ENST00000593013 ZNF530Q6P9A1 599 aaPredicted RBP23.53■■□□□ 1.36
HDAC5-212ENST00000593013 TAF7Q15545 349 aaPredicted RBP23.51■■□□□ 1.35
HDAC5-212ENST00000593013 FAM98CQ17RN3 349 aaKnown RBP23.51■■□□□ 1.35
HDAC5-212ENST00000593013 CYP27B1O15528 508 aa23.5■■□□□ 1.35
HDAC5-212ENST00000593013 SIRT2Q8IXJ6 389 aa23.5■■□□□ 1.35
HDAC5-212ENST00000593013 ATP10DQ9P241 1426 aa23.5■■□□□ 1.35
HDAC5-212ENST00000593013 AKAP4Q5JQC9 854 aa23.5■■□□□ 1.35
HDAC5-212ENST00000593013 ADAMTS7Q9UKP4 1686 aa23.5■■□□□ 1.35
HDAC5-212ENST00000593013 ONECUT3O60422 494 aaPredicted RBP23.49■■□□□ 1.35
HDAC5-212ENST00000593013 SLC4A2P04920 1241 aa23.49■■□□□ 1.35
HDAC5-212ENST00000593013 THSD7AQ9UPZ6 1657 aa23.48■■□□□ 1.35
HDAC5-212ENST00000593013 PHKG2P15735 406 aa23.48■■□□□ 1.35
HDAC5-212ENST00000593013 CHD1LQ86WJ1 897 aa23.48■■□□□ 1.35
HDAC5-212ENST00000593013 C1orf115Q9H7X2 142 aa23.48■■□□□ 1.35
HDAC5-212ENST00000593013 PCDH11XQ9BZA7 1347 aa23.48■■□□□ 1.35
HDAC5-212ENST00000593013 PCDH11YQ9BZA8 1340 aa23.48■■□□□ 1.35
HDAC5-212ENST00000593013 TNS2Q63HR2 1409 aa23.48■■□□□ 1.35
HDAC5-212ENST00000593013 RBM6P78332 1123 aaKnown RBP23.47■■□□□ 1.35
HDAC5-212ENST00000593013 EXOC5O00471 708 aa23.47■■□□□ 1.35
HDAC5-212ENST00000593013 C1orf141Q5JVX7 400 aa23.47■■□□□ 1.35
HDAC5-212ENST00000593013 IFNL2Q8IZJ0 200 aa23.47■■□□□ 1.35
HDAC5-212ENST00000593013 SIPA1L3O60292 1781 aaPredicted RBP23.46■■□□□ 1.35
HDAC5-212ENST00000593013 RXRBP28702 533 aa23.46■■□□□ 1.35
HDAC5-212ENST00000593013 CCDC30Q5VVM6 783 aa23.46■■□□□ 1.35
HDAC5-212ENST00000593013 PXDNLA1KZ92 1463 aa23.45■■□□□ 1.35
HDAC5-212ENST00000593013 SEC24BO95487 1268 aa23.45■■□□□ 1.34
HDAC5-212ENST00000593013 DDB1Q16531 1140 aa23.45■■□□□ 1.34
HDAC5-212ENST00000593013 STK31Q9BXU1 1019 aa23.45■■□□□ 1.34
HDAC5-212ENST00000593013 NKX1-1Q15270 411 aaPredicted RBP23.44■■□□□ 1.34
HDAC5-212ENST00000593013 ANKRD44Q8N8A2 993 aa23.44■■□□□ 1.34
HDAC5-212ENST00000593013 DDX54Q8TDD1 881 aaKnown RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms