RNA–Protein interactions for RNA: ENST00000592674.1

RPRD1A-211, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 4

Gene RPRD1A, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-211ENST00000592674 HNRNPUQ00839 825 aaKnown RBP eCLIP20.24■□□□□ 0.83
RPRD1A-211ENST00000592674 CALD1Q05682 793 aaKnown RBP20.24■□□□□ 0.83
RPRD1A-211ENST00000592674 TAF7Q15545 349 aaPredicted RBP20.24■□□□□ 0.83
RPRD1A-211ENST00000592674 CCDC125Q86Z20 511 aa20.24■□□□□ 0.83
RPRD1A-211ENST00000592674 BTBD11A6QL63 1104 aa20.23■□□□□ 0.83
RPRD1A-211ENST00000592674 UPF1Q92900 1129 aaKnown RBP eCLIP20.23■□□□□ 0.83
RPRD1A-211ENST00000592674 ASAP1Q9ULH1 1129 aa20.23■□□□□ 0.83
RPRD1A-211ENST00000592674 ITGB4P16144 1822 aa20.23■□□□□ 0.83
RPRD1A-211ENST00000592674 TNS1Q9HBL0 1735 aaKnown RBP20.22■□□□□ 0.83
RPRD1A-211ENST00000592674 BTAF1O14981 1849 aa20.21■□□□□ 0.83
RPRD1A-211ENST00000592674 VIRMAQ69YN4 1812 aaKnown RBP20.21■□□□□ 0.83
RPRD1A-211ENST00000592674 SLC39A6Q13433 755 aa20.21■□□□□ 0.83
RPRD1A-211ENST00000592674 SMARCC1Q92922 1105 aaPredicted RBP20.21■□□□□ 0.83
RPRD1A-211ENST00000592674 ATG3Q9NT62 314 aa20.21■□□□□ 0.83
RPRD1A-211ENST00000592674 MIS18AQ9NYP9 233 aa20.21■□□□□ 0.83
RPRD1A-211ENST00000592674 LAS1LQ9Y4W2 734 aaKnown RBP20.21■□□□□ 0.83
RPRD1A-211ENST00000592674 EP400Q96L91 3159 aa20.21■□□□□ 0.83
RPRD1A-211ENST00000592674 PALLDQ8WX93 1383 aa20.2■□□□□ 0.82
RPRD1A-211ENST00000592674 SIPA1L3O60292 1781 aaPredicted RBP20.19■□□□□ 0.82
RPRD1A-211ENST00000592674 BAG6P46379 1132 aa20.19■□□□□ 0.82
RPRD1A-211ENST00000592674 WDR63Q8IWG1 891 aa20.19■□□□□ 0.82
RPRD1A-211ENST00000592674 TTC5Q8N0Z6 440 aa20.19■□□□□ 0.82
RPRD1A-211ENST00000592674 TSPYL4Q9UJ04 414 aa20.19■□□□□ 0.82
RPRD1A-211ENST00000592674 ZNF790Q6PG37 636 aa20.18■□□□□ 0.82
RPRD1A-211ENST00000592674 CFAP44Q96MT7 982 aa20.18■□□□□ 0.82
RPRD1A-211ENST00000592674 IFT57Q9NWB7 429 aa20.18■□□□□ 0.82
RPRD1A-211ENST00000592674 ZNF521Q96K83 1311 aa20.18■□□□□ 0.82
RPRD1A-211ENST00000592674 CHL1O00533 1208 aa20.17■□□□□ 0.82
RPRD1A-211ENST00000592674 PLSCR1O15162 318 aa20.17■□□□□ 0.82
RPRD1A-211ENST00000592674 KCNQ3O43525 872 aa20.17■□□□□ 0.82
RPRD1A-211ENST00000592674 GNAI1P63096 354 aa20.17■□□□□ 0.82
RPRD1A-211ENST00000592674 BABAM1Q9NWV8 329 aa20.17■□□□□ 0.82
RPRD1A-211ENST00000592674 IL16Q14005 1332 aa20.17■□□□□ 0.82
RPRD1A-211ENST00000592674 PAPPAQ13219 1627 aa20.16■□□□□ 0.82
RPRD1A-211ENST00000592674 PTCD1O75127 700 aaKnown RBP20.16■□□□□ 0.82
RPRD1A-211ENST00000592674 EN1Q05925 392 aaPredicted RBP20.16■□□□□ 0.82
RPRD1A-211ENST00000592674 DEFB132Q7Z7B7 95 aa20.16■□□□□ 0.82
RPRD1A-211ENST00000592674 RBM42Q9BTD8 480 aaKnown RBP20.16■□□□□ 0.82
RPRD1A-211ENST00000592674 ZNF853P0CG23 659 aa20.15■□□□□ 0.82
RPRD1A-211ENST00000592674 KAT6BQ8WYB5 2073 aa20.14■□□□□ 0.81
RPRD1A-211ENST00000592674 CAMKK2Q96RR4 588 aa20.14■□□□□ 0.81
RPRD1A-211ENST00000592674 MBIPQ9NS73 344 aa20.14■□□□□ 0.81
RPRD1A-211ENST00000592674 KCPQ6ZWJ8 1503 aa20.13■□□□□ 0.81
RPRD1A-211ENST00000592674 LOC102724428A0A0B4J2F2 783 aa20.13■□□□□ 0.81
RPRD1A-211ENST00000592674 SIK1P57059 783 aa20.13■□□□□ 0.81
RPRD1A-211ENST00000592674 GOLGA2Q08379 1002 aa20.13■□□□□ 0.81
RPRD1A-211ENST00000592674 EZH2Q15910 746 aaKnown RBP20.13■□□□□ 0.81
RPRD1A-211ENST00000592674 ZNF496Q96IT1 587 aaPredicted RBP20.13■□□□□ 0.81
RPRD1A-211ENST00000592674 YTHDC1Q96MU7 727 aaKnown RBP20.13■□□□□ 0.81
RPRD1A-211ENST00000592674 FMNL2Q96PY5 1086 aa20.13■□□□□ 0.81
RPRD1A-211ENST00000592674 ZBED9Q6R2W3 1325 aa20.12■□□□□ 0.81
RPRD1A-211ENST00000592674 TXNRD1Q16881 649 aa20.12■□□□□ 0.81
RPRD1A-211ENST00000592674 SPINK5Q9NQ38 1064 aaPredicted RBP20.12■□□□□ 0.81
RPRD1A-211ENST00000592674 CCNL1Q9UK58 526 aaPredicted RBP20.12■□□□□ 0.81
RPRD1A-211ENST00000592674 KDM3BQ7LBC6 1761 aa20.11■□□□□ 0.81
RPRD1A-211ENST00000592674 ATP6V1AP38606 617 aa20.11■□□□□ 0.81
RPRD1A-211ENST00000592674 KCNQ4P56696 695 aa20.11■□□□□ 0.81
RPRD1A-211ENST00000592674 EIF4A1P60842 406 aaKnown RBP20.11■□□□□ 0.81
RPRD1A-211ENST00000592674 PROM2Q8N271 834 aa20.11■□□□□ 0.81
RPRD1A-211ENST00000592674 TSR2Q969E8 191 aaKnown RBP20.11■□□□□ 0.81
RPRD1A-211ENST00000592674 SLC27A3Q5K4L6 730 aa20.1■□□□□ 0.81
RPRD1A-211ENST00000592674 SLC4A9Q96Q91 983 aa20.1■□□□□ 0.81
RPRD1A-211ENST00000592674 MYH16Q9H6N6 1097 aa20.1■□□□□ 0.81
RPRD1A-211ENST00000592674 RGPD3A6NKT7 1758 aaPredicted RBP20.1■□□□□ 0.81
RPRD1A-211ENST00000592674 RGPD4Q7Z3J3 1758 aa20.1■□□□□ 0.81
RPRD1A-211ENST00000592674 HEG1Q9ULI3 1381 aa20.09■□□□□ 0.81
RPRD1A-211ENST00000592674 UBR2Q8IWV8 1755 aa20.09■□□□□ 0.81
RPRD1A-211ENST00000592674 E9PSI1 815 aa20.09■□□□□ 0.81
RPRD1A-211ENST00000592674 LRRC4BQ9NT99 713 aa20.09■□□□□ 0.81
RPRD1A-211ENST00000592674 LY75O60449 1722 aa20.09■□□□□ 0.81
RPRD1A-211ENST00000592674 FANCIQ9NVI1 1328 aa20.08■□□□□ 0.81
RPRD1A-211ENST00000592674 VSIG10Q8N0Z9 540 aa20.08■□□□□ 0.81
RPRD1A-211ENST00000592674 CDCA7LQ96GN5 454 aa20.08■□□□□ 0.81
RPRD1A-211ENST00000592674 SLFN5Q08AF3 891 aa20.07■□□□□ 0.8
RPRD1A-211ENST00000592674 ITPK1Q13572 414 aa20.07■□□□□ 0.8
RPRD1A-211ENST00000592674 SNRPA1P09661 255 aaKnown RBP20.06■□□□□ 0.8
RPRD1A-211ENST00000592674 KRT24Q2M2I5 525 aa20.06■□□□□ 0.8
RPRD1A-211ENST00000592674 DNAJC10Q8IXB1 793 aa20.06■□□□□ 0.8
RPRD1A-211ENST00000592674 PRAMEF22A3QJZ6 481 aa20.05■□□□□ 0.8
RPRD1A-211ENST00000592674 GIGYF1O75420 1035 aaPredicted RBP20.05■□□□□ 0.8
RPRD1A-211ENST00000592674 LINC00116Q8NCU8 138 aa20.05■□□□□ 0.8
RPRD1A-211ENST00000592674 TEX13AQ9BXU3 409 aaPredicted RBP20.04■□□□□ 0.8
RPRD1A-211ENST00000592674 ZNF831Q5JPB2 1677 aa20.03■□□□□ 0.8
RPRD1A-211ENST00000592674 RREB1Q92766 1687 aa20.03■□□□□ 0.8
RPRD1A-211ENST00000592674 TJP1Q07157 1748 aa20.03■□□□□ 0.8
RPRD1A-211ENST00000592674 HMGB2P26583 209 aaKnown RBP20.03■□□□□ 0.8
RPRD1A-211ENST00000592674 C8orf58Q8NAV2 365 aa20.03■□□□□ 0.8
RPRD1A-211ENST00000592674 EXOSC9Q06265 439 aaKnown RBP20.02■□□□□ 0.8
RPRD1A-211ENST00000592674 DUSP27Q5VZP5 1158 aa20.02■□□□□ 0.8
RPRD1A-211ENST00000592674 USP16Q9Y5T5 823 aa20.02■□□□□ 0.8
RPRD1A-211ENST00000592674 CICQ96RK0 1608 aaPredicted RBP20.02■□□□□ 0.79
RPRD1A-211ENST00000592674 ELL2O00472 640 aaPredicted RBP20.01■□□□□ 0.79
RPRD1A-211ENST00000592674 STARD3NLO95772 234 aa20.01■□□□□ 0.79
RPRD1A-211ENST00000592674 CYP19A1P11511 503 aaPredicted RBP20.01■□□□□ 0.79
RPRD1A-211ENST00000592674 TRMT2AQ8IZ69 625 aaKnown RBP20.01■□□□□ 0.79
RPRD1A-211ENST00000592674 HOXB7P09629 217 aa20■□□□□ 0.79
RPRD1A-211ENST00000592674 TSPYL6Q8N831 410 aa20■□□□□ 0.79
RPRD1A-211ENST00000592674 C5P01031 1676 aa20■□□□□ 0.79
RPRD1A-211ENST00000592674 NUP188Q5SRE5 1749 aa19.99■□□□□ 0.79
RPRD1A-211ENST00000592674 EIF2S2P20042 333 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms