RNA–Protein interactions for RNA: ENST00000592573.1

RDH13-221, Transcript of retinol dehydrogenase 13, humanhuman

TSL 2

Gene RDH13, Length 1,481 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-221ENST00000592573 LAS1LQ9Y4W2 734 aaKnown RBP23.29■■□□□ 1.32
RDH13-221ENST00000592573 MRC1P22897 1456 aa23.28■■□□□ 1.32
RDH13-221ENST00000592573 HNRNPUQ00839 825 aaKnown RBP eCLIP23.28■■□□□ 1.32
RDH13-221ENST00000592573 DEFB132Q7Z7B7 95 aa23.28■■□□□ 1.32
RDH13-221ENST00000592573 WWC1Q8IX03 1113 aa23.28■■□□□ 1.32
RDH13-221ENST00000592573 ITGB4P16144 1822 aa23.27■■□□□ 1.32
RDH13-221ENST00000592573 KCNQ3O43525 872 aa23.27■■□□□ 1.32
RDH13-221ENST00000592573 SF3B2Q13435 895 aaKnown RBP23.27■■□□□ 1.32
RDH13-221ENST00000592573 ATG3Q9NT62 314 aa23.27■■□□□ 1.32
RDH13-221ENST00000592573 BTBD11A6QL63 1104 aa23.25■■□□□ 1.31
RDH13-221ENST00000592573 KCNQ4P56696 695 aa23.25■■□□□ 1.31
RDH13-221ENST00000592573 EN1Q05925 392 aaPredicted RBP23.25■■□□□ 1.31
RDH13-221ENST00000592573 BTAF1O14981 1849 aa23.25■■□□□ 1.31
RDH13-221ENST00000592573 VIRMAQ69YN4 1812 aaKnown RBP23.25■■□□□ 1.31
RDH13-221ENST00000592573 TNS1Q9HBL0 1735 aaKnown RBP23.25■■□□□ 1.31
RDH13-221ENST00000592573 TAF7Q15545 349 aaPredicted RBP23.24■■□□□ 1.31
RDH13-221ENST00000592573 CCDC27Q2M243 656 aa23.24■■□□□ 1.31
RDH13-221ENST00000592573 PALLDQ8WX93 1383 aa23.23■■□□□ 1.31
RDH13-221ENST00000592573 PTCD1O75127 700 aaKnown RBP23.23■■□□□ 1.31
RDH13-221ENST00000592573 YTHDC1Q96MU7 727 aaKnown RBP23.23■■□□□ 1.31
RDH13-221ENST00000592573 RBM42Q9BTD8 480 aaKnown RBP23.22■■□□□ 1.31
RDH13-221ENST00000592573 EZH2Q15910 746 aaKnown RBP23.21■■□□□ 1.31
RDH13-221ENST00000592573 TSPYL4Q9UJ04 414 aa23.21■■□□□ 1.31
RDH13-221ENST00000592573 BAG6P46379 1132 aa23.2■■□□□ 1.3
RDH13-221ENST00000592573 SPINK5Q9NQ38 1064 aaPredicted RBP23.2■■□□□ 1.3
RDH13-221ENST00000592573 ZNF790Q6PG37 636 aa23.19■■□□□ 1.3
RDH13-221ENST00000592573 SIPA1L3O60292 1781 aaPredicted RBP23.19■■□□□ 1.3
RDH13-221ENST00000592573 CCDC125Q86Z20 511 aa23.18■■□□□ 1.3
RDH13-221ENST00000592573 TTC5Q8N0Z6 440 aa23.18■■□□□ 1.3
RDH13-221ENST00000592573 PROM2Q8N271 834 aa23.18■■□□□ 1.3
RDH13-221ENST00000592573 SLC4A9Q96Q91 983 aa23.18■■□□□ 1.3
RDH13-221ENST00000592573 ZNF521Q96K83 1311 aa23.18■■□□□ 1.3
RDH13-221ENST00000592573 SMARCC1Q92922 1105 aaPredicted RBP23.17■■□□□ 1.3
RDH13-221ENST00000592573 TSR2Q969E8 191 aaKnown RBP23.17■■□□□ 1.3
RDH13-221ENST00000592573 ZNF496Q96IT1 587 aaPredicted RBP23.17■■□□□ 1.3
RDH13-221ENST00000592573 CAMKK2Q96RR4 588 aa23.17■■□□□ 1.3
RDH13-221ENST00000592573 CHL1O00533 1208 aa23.17■■□□□ 1.3
RDH13-221ENST00000592573 NCBP3Q53F19 620 aaKnown RBP23.17■■□□□ 1.3
RDH13-221ENST00000592573 MBIPQ9NS73 344 aa23.17■■□□□ 1.3
RDH13-221ENST00000592573 LOC102724428A0A0B4J2F2 783 aa23.16■■□□□ 1.3
RDH13-221ENST00000592573 PLSCR1O15162 318 aa23.16■■□□□ 1.3
RDH13-221ENST00000592573 ZNF853P0CG23 659 aa23.16■■□□□ 1.3
RDH13-221ENST00000592573 SIK1P57059 783 aa23.16■■□□□ 1.3
RDH13-221ENST00000592573 CALD1Q05682 793 aaKnown RBP23.16■■□□□ 1.3
RDH13-221ENST00000592573 TXNRD1Q16881 649 aa23.16■■□□□ 1.3
RDH13-221ENST00000592573 CFAP44Q96MT7 982 aa23.16■■□□□ 1.3
RDH13-221ENST00000592573 LRRC4BQ9NT99 713 aa23.16■■□□□ 1.3
RDH13-221ENST00000592573 KRT24Q2M2I5 525 aa23.15■■□□□ 1.3
RDH13-221ENST00000592573 WDR63Q8IWG1 891 aa23.15■■□□□ 1.3
RDH13-221ENST00000592573 NGEFQ8N5V2 710 aa23.15■■□□□ 1.3
RDH13-221ENST00000592573 CDCA7LQ96GN5 454 aa23.15■■□□□ 1.3
RDH13-221ENST00000592573 IFT57Q9NWB7 429 aa23.15■■□□□ 1.3
RDH13-221ENST00000592573 CCNL1Q9UK58 526 aaPredicted RBP23.15■■□□□ 1.3
RDH13-221ENST00000592573 KCPQ6ZWJ8 1503 aa23.15■■□□□ 1.3
RDH13-221ENST00000592573 PAPPAQ13219 1627 aa23.15■■□□□ 1.3
RDH13-221ENST00000592573 PRAMEF22A3QJZ6 481 aa23.14■■□□□ 1.29
RDH13-221ENST00000592573 ATP6V1AP38606 617 aa23.13■■□□□ 1.29
RDH13-221ENST00000592573 GNAI1P63096 354 aa23.13■■□□□ 1.29
RDH13-221ENST00000592573 ITPK1Q13572 414 aa23.13■■□□□ 1.29
RDH13-221ENST00000592573 EIF4A1P60842 406 aaKnown RBP23.12■■□□□ 1.29
RDH13-221ENST00000592573 FMNL2Q96PY5 1086 aa23.11■■□□□ 1.29
RDH13-221ENST00000592573 IL16Q14005 1332 aa23.11■■□□□ 1.29
RDH13-221ENST00000592573 GOLGA2Q08379 1002 aa23.11■■□□□ 1.29
RDH13-221ENST00000592573 DNAJC10Q8IXB1 793 aa23.11■■□□□ 1.29
RDH13-221ENST00000592573 FANCIQ9NVI1 1328 aa23.1■■□□□ 1.29
RDH13-221ENST00000592573 KDM3BQ7LBC6 1761 aa23.09■■□□□ 1.29
RDH13-221ENST00000592573 LINC00116Q8NCU8 138 aa23.09■■□□□ 1.29
RDH13-221ENST00000592573 HEG1Q9ULI3 1381 aa23.08■■□□□ 1.29
RDH13-221ENST00000592573 ELL2O00472 640 aaPredicted RBP23.08■■□□□ 1.29
RDH13-221ENST00000592573 BABAM1Q9NWV8 329 aa23.08■■□□□ 1.29
RDH13-221ENST00000592573 LY75O60449 1722 aa23.08■■□□□ 1.28
RDH13-221ENST00000592573 UBR2Q8IWV8 1755 aa23.07■■□□□ 1.28
RDH13-221ENST00000592573 ZBED9Q6R2W3 1325 aa23.07■■□□□ 1.28
RDH13-221ENST00000592573 SLFN5Q08AF3 891 aa23.06■■□□□ 1.28
RDH13-221ENST00000592573 SLC27A3Q5K4L6 730 aa23.06■■□□□ 1.28
RDH13-221ENST00000592573 C8orf58Q8NAV2 365 aa23.06■■□□□ 1.28
RDH13-221ENST00000592573 SMIM5Q71RC9 77 aa23.05■■□□□ 1.28
RDH13-221ENST00000592573 TSPYL6Q8N831 410 aa23.05■■□□□ 1.28
RDH13-221ENST00000592573 NECTIN2Q92692 538 aa23.05■■□□□ 1.28
RDH13-221ENST00000592573 GIGYF1O75420 1035 aaPredicted RBP23.05■■□□□ 1.28
RDH13-221ENST00000592573 SNRPA1P09661 255 aaKnown RBP23.05■■□□□ 1.28
RDH13-221ENST00000592573 MYH16Q9H6N6 1097 aa23.05■■□□□ 1.28
RDH13-221ENST00000592573 ANO8Q9HCE9 1232 aaPredicted RBP23.05■■□□□ 1.28
RDH13-221ENST00000592573 USP16Q9Y5T5 823 aa23.05■■□□□ 1.28
RDH13-221ENST00000592573 E9PSI1 815 aa23.04■■□□□ 1.28
RDH13-221ENST00000592573 PIP4K2AP48426 406 aaPredicted RBP23.04■■□□□ 1.28
RDH13-221ENST00000592573 EXOSC9Q06265 439 aaKnown RBP23.04■■□□□ 1.28
RDH13-221ENST00000592573 ZNF827Q17R98 1081 aa23.03■■□□□ 1.28
RDH13-221ENST00000592573 DUSP27Q5VZP5 1158 aa23.03■■□□□ 1.28
RDH13-221ENST00000592573 TJP1Q07157 1748 aa23.03■■□□□ 1.28
RDH13-221ENST00000592573 EIF2S2P20042 333 aaKnown RBP23.02■■□□□ 1.28
RDH13-221ENST00000592573 VSIG10Q8N0Z9 540 aa23.02■■□□□ 1.28
RDH13-221ENST00000592573 RGPD3A6NKT7 1758 aaPredicted RBP23.02■■□□□ 1.28
RDH13-221ENST00000592573 RGPD4Q7Z3J3 1758 aa23.02■■□□□ 1.28
RDH13-221ENST00000592573 CYP19A1P11511 503 aaPredicted RBP23.01■■□□□ 1.27
RDH13-221ENST00000592573 C5P01031 1676 aa23.01■■□□□ 1.27
RDH13-221ENST00000592573 RREB1Q92766 1687 aa23.01■■□□□ 1.27
RDH13-221ENST00000592573 A1BGP04217 495 aa23■■□□□ 1.27
RDH13-221ENST00000592573 CRKLP46109 303 aaKnown RBP23■■□□□ 1.27
RDH13-221ENST00000592573 AMIGO3Q86WK7 504 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms