RNA–Protein interactions for RNA: ENST00000592065.2

GFAP-221, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 2,539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-221ENST00000592065 NCAPD2Q15021 1401 aa17.26■□□□□ 0.35
GFAP-221ENST00000592065 TOGARAM1Q9Y4F4 1720 aa17.26■□□□□ 0.35
GFAP-221ENST00000592065 U2SURPO15042 1029 aaKnown RBP17.26■□□□□ 0.35
GFAP-221ENST00000592065 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.25■□□□□ 0.35
GFAP-221ENST00000592065 PCDH11XQ9BZA7 1347 aa17.25■□□□□ 0.35
GFAP-221ENST00000592065 PCDH11YQ9BZA8 1340 aa17.25■□□□□ 0.35
GFAP-221ENST00000592065 TXNRD1Q16881 649 aa17.25■□□□□ 0.35
GFAP-221ENST00000592065 LAS1LQ9Y4W2 734 aaKnown RBP17.25■□□□□ 0.35
GFAP-221ENST00000592065 RREB1Q92766 1687 aa17.24■□□□□ 0.35
GFAP-221ENST00000592065 PKD1L3Q7Z443 1732 aa17.24■□□□□ 0.35
GFAP-221ENST00000592065 LRRC4BQ9NT99 713 aa17.24■□□□□ 0.35
GFAP-221ENST00000592065 BCL9O00512 1426 aa17.24■□□□□ 0.35
GFAP-221ENST00000592065 NEFMP07197 916 aa17.23■□□□□ 0.35
GFAP-221ENST00000592065 COL3A1P02461 1466 aaPredicted RBP17.23■□□□□ 0.35
GFAP-221ENST00000592065 DIAPH1O60610 1272 aaKnown RBP17.22■□□□□ 0.35
GFAP-221ENST00000592065 PLSCR1O15162 318 aa17.21■□□□□ 0.35
GFAP-221ENST00000592065 PHKG2P15735 406 aa17.21■□□□□ 0.35
GFAP-221ENST00000592065 ZNF530Q6P9A1 599 aaPredicted RBP17.2■□□□□ 0.34
GFAP-221ENST00000592065 SPG7Q9UQ90 795 aa17.2■□□□□ 0.34
GFAP-221ENST00000592065 FAM161AQ3B820 660 aa17.19■□□□□ 0.34
GFAP-221ENST00000592065 C8orf34Q49A92 452 aa17.19■□□□□ 0.34
GFAP-221ENST00000592065 SMIM5Q71RC9 77 aa17.19■□□□□ 0.34
GFAP-221ENST00000592065 ITGB4P16144 1822 aa17.19■□□□□ 0.34
GFAP-221ENST00000592065 CCDC146Q8IYE0 955 aa17.19■□□□□ 0.34
GFAP-221ENST00000592065 NGEFQ8N5V2 710 aa17.19■□□□□ 0.34
GFAP-221ENST00000592065 SPINK5Q9NQ38 1064 aaPredicted RBP17.19■□□□□ 0.34
GFAP-221ENST00000592065 PIGBQ92521 554 aa17.18■□□□□ 0.34
GFAP-221ENST00000592065 KDRP35968 1356 aa17.18■□□□□ 0.34
GFAP-221ENST00000592065 APAF1O14727 1248 aa17.18■□□□□ 0.34
GFAP-221ENST00000592065 ZNF827Q17R98 1081 aa17.18■□□□□ 0.34
GFAP-221ENST00000592065 IFNL2Q8IZJ0 200 aa17.17■□□□□ 0.34
GFAP-221ENST00000592065 E9PSI1 815 aa17.17■□□□□ 0.34
GFAP-221ENST00000592065 KDM6AO15550 1401 aaPredicted RBP17.17■□□□□ 0.34
GFAP-221ENST00000592065 ASAP1Q9ULH1 1129 aa17.16■□□□□ 0.34
GFAP-221ENST00000592065 MTHFSDQ2M296 383 aaKnown RBP17.15■□□□□ 0.34
GFAP-221ENST00000592065 PHACTR3Q96KR7 559 aa17.15■□□□□ 0.34
GFAP-221ENST00000592065 VIRMAQ69YN4 1812 aaKnown RBP17.15■□□□□ 0.34
GFAP-221ENST00000592065 U2AF1L5P0DN76 240 aaPredicted RBP17.14■□□□□ 0.33
GFAP-221ENST00000592065 U2AF1Q01081 240 aaKnown RBP eCLIP17.14■□□□□ 0.33
GFAP-221ENST00000592065 PLEKHO1Q53GL0 409 aaPredicted RBP17.14■□□□□ 0.33
GFAP-221ENST00000592065 LGR6Q9HBX8 967 aa17.14■□□□□ 0.33
GFAP-221ENST00000592065 CCNL1Q9UK58 526 aaPredicted RBP17.14■□□□□ 0.33
GFAP-221ENST00000592065 PALLDQ8WX93 1383 aa17.14■□□□□ 0.33
GFAP-221ENST00000592065 ZBTB7AO95365 584 aa17.13■□□□□ 0.33
GFAP-221ENST00000592065 NBPF14Q5TI25 921 aa17.13■□□□□ 0.33
GFAP-221ENST00000592065 RGPD3A6NKT7 1758 aaPredicted RBP17.13■□□□□ 0.33
GFAP-221ENST00000592065 RGPD4Q7Z3J3 1758 aa17.13■□□□□ 0.33
GFAP-221ENST00000592065 BCAR3O75815 825 aa17.13■□□□□ 0.33
GFAP-221ENST00000592065 PRKAR2BP31323 418 aa17.13■□□□□ 0.33
GFAP-221ENST00000592065 TMOD3Q9NYL9 352 aa17.13■□□□□ 0.33
GFAP-221ENST00000592065 NKX1-1Q15270 411 aaPredicted RBP17.12■□□□□ 0.33
GFAP-221ENST00000592065 AMIGO3Q86WK7 504 aa17.12■□□□□ 0.33
GFAP-221ENST00000592065 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.12■□□□□ 0.33
GFAP-221ENST00000592065 C1orf141Q5JVX7 400 aa17.12■□□□□ 0.33
GFAP-221ENST00000592065 SLC15A2Q16348 729 aa17.11■□□□□ 0.33
GFAP-221ENST00000592065 NFATC2IPQ8NCF5 419 aa17.11■□□□□ 0.33
GFAP-221ENST00000592065 CFAP53Q96M91 514 aa17.11■□□□□ 0.33
GFAP-221ENST00000592065 PDE3AQ14432 1141 aa17.1■□□□□ 0.33
GFAP-221ENST00000592065 LY75O60449 1722 aa17.1■□□□□ 0.33
GFAP-221ENST00000592065 PAPPAQ13219 1627 aa17.1■□□□□ 0.33
GFAP-221ENST00000592065 ATF5Q9Y2D1 282 aaPredicted RBP17.1■□□□□ 0.33
GFAP-221ENST00000592065 RSPH6AQ9H0K4 717 aa17.09■□□□□ 0.33
GFAP-221ENST00000592065 ATG3Q9NT62 314 aa17.09■□□□□ 0.33
GFAP-221ENST00000592065 STK32BQ9NY57 414 aa17.09■□□□□ 0.33
GFAP-221ENST00000592065 PTCD1O75127 700 aaKnown RBP17.09■□□□□ 0.33
GFAP-221ENST00000592065 NFKBIBQ15653 356 aa17.09■□□□□ 0.33
GFAP-221ENST00000592065 AMOTQ4VCS5 1084 aa17.09■□□□□ 0.33
GFAP-221ENST00000592065 SLC4A3P48751 1232 aa17.08■□□□□ 0.33
GFAP-221ENST00000592065 RGS3P49796 1198 aa17.08■□□□□ 0.33
GFAP-221ENST00000592065 SLC39A6Q13433 755 aa17.08■□□□□ 0.33
GFAP-221ENST00000592065 DCAF5Q96JK2 942 aa17.08■□□□□ 0.33
GFAP-221ENST00000592065 SLC4A9Q96Q91 983 aa17.08■□□□□ 0.33
GFAP-221ENST00000592065 CABP4P57796 275 aa17.08■□□□□ 0.32
GFAP-221ENST00000592065 RBM42Q9BTD8 480 aaKnown RBP17.08■□□□□ 0.32
GFAP-221ENST00000592065 WWC1Q8IX03 1113 aa17.07■□□□□ 0.32
GFAP-221ENST00000592065 TUBGCP6Q96RT7 1819 aa17.07■□□□□ 0.32
GFAP-221ENST00000592065 ITPK1Q13572 414 aa17.07■□□□□ 0.32
GFAP-221ENST00000592065 DCTN1Q14203 1278 aa17.07■□□□□ 0.32
GFAP-221ENST00000592065 TFCP2L1Q9NZI6 479 aa17.07■□□□□ 0.32
GFAP-221ENST00000592065 DAXXQ9UER7 740 aaPredicted RBP17.07■□□□□ 0.32
GFAP-221ENST00000592065 PHF14O94880 888 aa17.06■□□□□ 0.32
GFAP-221ENST00000592065 IGHDP01880 384 aa17.06■□□□□ 0.32
GFAP-221ENST00000592065 LOC102724428A0A0B4J2F2 783 aa17.05■□□□□ 0.32
GFAP-221ENST00000592065 SIK1P57059 783 aa17.05■□□□□ 0.32
GFAP-221ENST00000592065 AKAP4Q5JQC9 854 aa17.05■□□□□ 0.32
GFAP-221ENST00000592065 AKT1S1Q96B36 256 aa17.05■□□□□ 0.32
GFAP-221ENST00000592065 LINC00116Q8NCU8 138 aa17.05■□□□□ 0.32
GFAP-221ENST00000592065 ATP6V1AP38606 617 aa17.04■□□□□ 0.32
GFAP-221ENST00000592065 PNPLA7Q6ZV29 1317 aa17.04■□□□□ 0.32
GFAP-221ENST00000592065 SCN11AQ9UI33 1791 aa17.04■□□□□ 0.32
GFAP-221ENST00000592065 C5P01031 1676 aa17.04■□□□□ 0.32
GFAP-221ENST00000592065 RNMTO43148 476 aaKnown RBP17.04■□□□□ 0.32
GFAP-221ENST00000592065 SLC27A3Q5K4L6 730 aa17.04■□□□□ 0.32
GFAP-221ENST00000592065 MCM10Q7L590 875 aa17.04■□□□□ 0.32
GFAP-221ENST00000592065 CASZ1Q86V15 1759 aa17.03■□□□□ 0.32
GFAP-221ENST00000592065 GSE1Q14687 1217 aa17.03■□□□□ 0.32
GFAP-221ENST00000592065 MSL1Q68DK7 614 aa17.03■□□□□ 0.32
GFAP-221ENST00000592065 IL17REQ8NFR9 667 aa17.03■□□□□ 0.32
GFAP-221ENST00000592065 CLUAP1Q96AJ1 413 aa17.03■□□□□ 0.32
GFAP-221ENST00000592065 TAF1LQ8IZX4 1826 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms