RNA–Protein interactions for RNA: ENST00000591909.5

TUBB6-213, Transcript of tubulin beta 6 class V, humanhuman

TSL 1 (best) BASIC

Gene TUBB6, Length 1,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB6-213ENST00000591909 RNMTO43148 476 aaKnown RBP20.37■□□□□ 0.85
TUBB6-213ENST00000591909 SLC16A10Q8TF71 515 aa20.37■□□□□ 0.85
TUBB6-213ENST00000591909 PDGFDQ9GZP0 370 aaPredicted RBP20.37■□□□□ 0.85
TUBB6-213ENST00000591909 RSPH6AQ9H0K4 717 aa20.37■□□□□ 0.85
TUBB6-213ENST00000591909 PNNQ9H307 717 aaKnown RBP20.37■□□□□ 0.85
TUBB6-213ENST00000591909 ATF5Q9Y2D1 282 aaPredicted RBP20.37■□□□□ 0.85
TUBB6-213ENST00000591909 TOGARAM1Q9Y4F4 1720 aa20.36■□□□□ 0.85
TUBB6-213ENST00000591909 MYBBP1AQ9BQG0 1328 aaKnown RBP20.36■□□□□ 0.85
TUBB6-213ENST00000591909 PAPPAQ13219 1627 aa20.36■□□□□ 0.85
TUBB6-213ENST00000591909 SLC52A2Q9HAB3 445 aa20.36■□□□□ 0.85
TUBB6-213ENST00000591909 MAP3K5Q99683 1374 aa20.35■□□□□ 0.85
TUBB6-213ENST00000591909 TEFQ10587 303 aa20.35■□□□□ 0.85
TUBB6-213ENST00000591909 LGR6Q9HBX8 967 aa20.35■□□□□ 0.85
TUBB6-213ENST00000591909 SRCAPQ6ZRS2 3230 aa20.35■□□□□ 0.85
TUBB6-213ENST00000591909 PNPLA7Q6ZV29 1317 aa20.34■□□□□ 0.85
TUBB6-213ENST00000591909 PTCD1O75127 700 aaKnown RBP20.34■□□□□ 0.85
TUBB6-213ENST00000591909 RTF1Q92541 710 aaKnown RBP20.34■□□□□ 0.85
TUBB6-213ENST00000591909 LY75O60449 1722 aa20.33■□□□□ 0.85
TUBB6-213ENST00000591909 ZNF316A6NFI3 1004 aaPredicted RBP20.33■□□□□ 0.85
TUBB6-213ENST00000591909 PHACTR3Q96KR7 559 aa20.33■□□□□ 0.85
TUBB6-213ENST00000591909 POLD1P28340 1107 aa20.32■□□□□ 0.84
TUBB6-213ENST00000591909 MAPK8IP3Q9UPT6 1336 aa20.3■□□□□ 0.84
TUBB6-213ENST00000591909 GNPATO15228 680 aa20.3■□□□□ 0.84
TUBB6-213ENST00000591909 MAPK8IP2Q13387 824 aaPredicted RBP20.3■□□□□ 0.84
TUBB6-213ENST00000591909 ITPK1Q13572 414 aa20.3■□□□□ 0.84
TUBB6-213ENST00000591909 TTC5Q8N0Z6 440 aa20.3■□□□□ 0.84
TUBB6-213ENST00000591909 LINC00116Q8NCU8 138 aa20.3■□□□□ 0.84
TUBB6-213ENST00000591909 ITGB4P16144 1822 aa20.3■□□□□ 0.84
TUBB6-213ENST00000591909 PHF14O94880 888 aa20.29■□□□□ 0.84
TUBB6-213ENST00000591909 SSFA2P28290 1259 aa20.28■□□□□ 0.84
TUBB6-213ENST00000591909 PTGER2P43116 358 aa20.28■□□□□ 0.84
TUBB6-213ENST00000591909 COL23A1Q86Y22 540 aaPredicted RBP20.28■□□□□ 0.84
TUBB6-213ENST00000591909 PRKRIP1Q9H875 184 aaPredicted RBP20.28■□□□□ 0.84
TUBB6-213ENST00000591909 CASZ1Q86V15 1759 aa20.27■□□□□ 0.84
TUBB6-213ENST00000591909 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.27■□□□□ 0.84
TUBB6-213ENST00000591909 WDR43Q15061 677 aaKnown RBP eCLIP20.27■□□□□ 0.84
TUBB6-213ENST00000591909 IL17REQ8NFR9 667 aa20.27■□□□□ 0.84
TUBB6-213ENST00000591909 ARXQ96QS3 562 aa20.27■□□□□ 0.84
TUBB6-213ENST00000591909 RTCBQ9Y3I0 505 aaKnown RBP20.27■□□□□ 0.84
TUBB6-213ENST00000591909 DCAF8L1A6NGE4 600 aa20.26■□□□□ 0.83
TUBB6-213ENST00000591909 HTATSF1O43719 755 aaKnown RBP20.26■□□□□ 0.83
TUBB6-213ENST00000591909 SLC39A6Q13433 755 aa20.26■□□□□ 0.83
TUBB6-213ENST00000591909 RC3H1Q5TC82 1133 aaKnown RBP20.26■□□□□ 0.83
TUBB6-213ENST00000591909 MRC1P22897 1456 aa20.25■□□□□ 0.83
TUBB6-213ENST00000591909 SLC4A9Q96Q91 983 aa20.25■□□□□ 0.83
TUBB6-213ENST00000591909 C5P01031 1676 aa20.25■□□□□ 0.83
TUBB6-213ENST00000591909 CNTNAP4Q9C0A0 1308 aa20.25■□□□□ 0.83
TUBB6-213ENST00000591909 C4BP0C0L5 1744 aa20.23■□□□□ 0.83
TUBB6-213ENST00000591909 TRAPPC3LQ5T215 181 aa20.23■□□□□ 0.83
TUBB6-213ENST00000591909 SGIP1Q9BQI5 828 aa20.23■□□□□ 0.83
TUBB6-213ENST00000591909 CEMIPQ8WUJ3 1361 aa20.22■□□□□ 0.83
TUBB6-213ENST00000591909 BTBD11A6QL63 1104 aa20.22■□□□□ 0.83
TUBB6-213ENST00000591909 ZNF790Q6PG37 636 aa20.22■□□□□ 0.83
TUBB6-213ENST00000591909 MCM10Q7L590 875 aa20.22■□□□□ 0.83
TUBB6-213ENST00000591909 VSIG10Q8N0Z9 540 aa20.22■□□□□ 0.83
TUBB6-213ENST00000591909 RPS6KA4O75676 772 aa20.21■□□□□ 0.83
TUBB6-213ENST00000591909 CRKLP46109 303 aaKnown RBP20.21■□□□□ 0.83
TUBB6-213ENST00000591909 NFE2L2Q16236 605 aa20.21■□□□□ 0.83
TUBB6-213ENST00000591909 MSL1Q68DK7 614 aa20.21■□□□□ 0.83
TUBB6-213ENST00000591909 PLEKHF1Q96S99 279 aa20.21■□□□□ 0.83
TUBB6-213ENST00000591909 STARD3NLO95772 234 aa20.2■□□□□ 0.82
TUBB6-213ENST00000591909 RFC4P35249 363 aa20.2■□□□□ 0.82
TUBB6-213ENST00000591909 KLHL34Q8N239 644 aa20.2■□□□□ 0.82
TUBB6-213ENST00000591909 FMNL2Q96PY5 1086 aa20.2■□□□□ 0.82
TUBB6-213ENST00000591909 TEX13AQ9BXU3 409 aaPredicted RBP20.2■□□□□ 0.82
TUBB6-213ENST00000591909 FHDC1Q9C0D6 1143 aaPredicted RBP20.2■□□□□ 0.82
TUBB6-213ENST00000591909 SCN11AQ9UI33 1791 aa20.19■□□□□ 0.82
TUBB6-213ENST00000591909 DNAJC10Q8IXB1 793 aa20.19■□□□□ 0.82
TUBB6-213ENST00000591909 CCDC87Q9NVE4 849 aa20.19■□□□□ 0.82
TUBB6-213ENST00000591909 ANP32CO43423 234 aa20.18■□□□□ 0.82
TUBB6-213ENST00000591909 SMIM5Q71RC9 77 aa20.18■□□□□ 0.82
TUBB6-213ENST00000591909 QSER1Q2KHR3 1735 aa20.18■□□□□ 0.82
TUBB6-213ENST00000591909 LMOD3Q0VAK6 560 aa20.17■□□□□ 0.82
TUBB6-213ENST00000591909 DCTN1Q14203 1278 aa20.17■□□□□ 0.82
TUBB6-213ENST00000591909 AMIGO3Q86WK7 504 aa20.17■□□□□ 0.82
TUBB6-213ENST00000591909 ZNF831Q5JPB2 1677 aa20.16■□□□□ 0.82
TUBB6-213ENST00000591909 ADAMTS7Q9UKP4 1686 aa20.16■□□□□ 0.82
TUBB6-213ENST00000591909 CYP19A1P11511 503 aaPredicted RBP20.16■□□□□ 0.82
TUBB6-213ENST00000591909 TAF7Q15545 349 aaPredicted RBP20.16■□□□□ 0.82
TUBB6-213ENST00000591909 NPM2Q86SE8 214 aaKnown RBP20.16■□□□□ 0.82
TUBB6-213ENST00000591909 PNISRQ8TF01 805 aaKnown RBP20.16■□□□□ 0.82
TUBB6-213ENST00000591909 ARHGEF1Q92888 912 aaKnown RBP20.16■□□□□ 0.82
TUBB6-213ENST00000591909 ZNF496Q96IT1 587 aaPredicted RBP20.16■□□□□ 0.82
TUBB6-213ENST00000591909 SYT17Q9BSW7 474 aa20.16■□□□□ 0.82
TUBB6-213ENST00000591909 NLGN1Q8N2Q7 840 aa20.15■□□□□ 0.82
TUBB6-213ENST00000591909 TAF1LQ8IZX4 1826 aa20.14■□□□□ 0.81
TUBB6-213ENST00000591909 HEG1Q9ULI3 1381 aa20.14■□□□□ 0.81
TUBB6-213ENST00000591909 RIPK4P57078 832 aa20.14■□□□□ 0.81
TUBB6-213ENST00000591909 RUNDC1Q96C34 613 aa20.14■□□□□ 0.81
TUBB6-213ENST00000591909 INTS5Q6P9B9 1019 aaKnown RBP20.13■□□□□ 0.81
TUBB6-213ENST00000591909 PPP4R3CPQ6ZMV5 832 aa20.13■□□□□ 0.81
TUBB6-213ENST00000591909 ADAMTS8Q9UP79 889 aa20.13■□□□□ 0.81
TUBB6-213ENST00000591909 KCPQ6ZWJ8 1503 aa20.12■□□□□ 0.81
TUBB6-213ENST00000591909 ZPR1O75312 459 aa20.12■□□□□ 0.81
TUBB6-213ENST00000591909 CCDC146Q8IYE0 955 aa20.12■□□□□ 0.81
TUBB6-213ENST00000591909 SNRPA1P09661 255 aaKnown RBP20.11■□□□□ 0.81
TUBB6-213ENST00000591909 CANXP27824 592 aaKnown RBP20.11■□□□□ 0.81
TUBB6-213ENST00000591909 TMPOP42166 694 aaKnown RBP20.11■□□□□ 0.81
TUBB6-213ENST00000591909 NEUROD2Q15784 382 aa20.1■□□□□ 0.81
TUBB6-213ENST00000591909 TUBGCP6Q96RT7 1819 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms