RNA–Protein interactions for RNA: ENST00000591829.5

R3HDM4-207, Transcript of R3H domain containing 4, humanhuman

TSL 5

Gene R3HDM4, Length 823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-207ENST00000591829 SMARCC1Q92922 1105 aaPredicted RBP18.14■□□□□ 0.49
R3HDM4-207ENST00000591829 APBA3O96018 575 aa18.13■□□□□ 0.49
R3HDM4-207ENST00000591829 BAG6P46379 1132 aa18.13■□□□□ 0.49
R3HDM4-207ENST00000591829 SALL2Q9Y467 1007 aaPredicted RBP18.13■□□□□ 0.49
R3HDM4-207ENST00000591829 SIPA1L3O60292 1781 aaPredicted RBP18.12■□□□□ 0.49
R3HDM4-207ENST00000591829 TAF7Q15545 349 aaPredicted RBP18.12■□□□□ 0.49
R3HDM4-207ENST00000591829 THUMPD2Q9BTF0 503 aaKnown RBP18.12■□□□□ 0.49
R3HDM4-207ENST00000591829 SENP3-EIF4A1A0A087X0R7 540 aa18.11■□□□□ 0.49
R3HDM4-207ENST00000591829 BTBD11A6QL63 1104 aa18.11■□□□□ 0.49
R3HDM4-207ENST00000591829 WWC1Q8IX03 1113 aa18.11■□□□□ 0.49
R3HDM4-207ENST00000591829 TTC5Q8N0Z6 440 aa18.11■□□□□ 0.49
R3HDM4-207ENST00000591829 UPF1Q92900 1129 aaKnown RBP eCLIP18.11■□□□□ 0.491e-14■□□□□ 9.2
R3HDM4-207ENST00000591829 BABAM1Q9NWV8 329 aa18.11■□□□□ 0.49
R3HDM4-207ENST00000591829 HNRNPUQ00839 825 aaKnown RBP eCLIP18.1■□□□□ 0.49
R3HDM4-207ENST00000591829 RGPD3A6NKT7 1758 aaPredicted RBP18.09■□□□□ 0.49
R3HDM4-207ENST00000591829 RGPD4Q7Z3J3 1758 aa18.09■□□□□ 0.49
R3HDM4-207ENST00000591829 PALLDQ8WX93 1383 aa18.09■□□□□ 0.49
R3HDM4-207ENST00000591829 PLSCR1O15162 318 aa18.09■□□□□ 0.49
R3HDM4-207ENST00000591829 HMGB2P26583 209 aaKnown RBP18.09■□□□□ 0.49
R3HDM4-207ENST00000591829 PTF1AQ7RTS3 328 aa18.09■□□□□ 0.49
R3HDM4-207ENST00000591829 WDR63Q8IWG1 891 aa18.09■□□□□ 0.49
R3HDM4-207ENST00000591829 EP400Q96L91 3159 aa18.09■□□□□ 0.49
R3HDM4-207ENST00000591829 GNAI1P63096 354 aa18.08■□□□□ 0.48
R3HDM4-207ENST00000591829 ATG3Q9NT62 314 aa18.08■□□□□ 0.48
R3HDM4-207ENST00000591829 TSPYL4Q9UJ04 414 aa18.08■□□□□ 0.48
R3HDM4-207ENST00000591829 LAS1LQ9Y4W2 734 aaKnown RBP18.08■□□□□ 0.48
R3HDM4-207ENST00000591829 PAPPAQ13219 1627 aa18.08■□□□□ 0.48
R3HDM4-207ENST00000591829 IL16Q14005 1332 aa18.07■□□□□ 0.48
R3HDM4-207ENST00000591829 CFAP44Q96MT7 982 aa18.07■□□□□ 0.48
R3HDM4-207ENST00000591829 IFT57Q9NWB7 429 aa18.07■□□□□ 0.48
R3HDM4-207ENST00000591829 ASAP1Q9ULH1 1129 aa18.07■□□□□ 0.48
R3HDM4-207ENST00000591829 ZNF790Q6PG37 636 aa18.06■□□□□ 0.48
R3HDM4-207ENST00000591829 SLC39A6Q13433 755 aa18.05■□□□□ 0.48
R3HDM4-207ENST00000591829 RBM42Q9BTD8 480 aaKnown RBP18.05■□□□□ 0.48
R3HDM4-207ENST00000591829 KDM3BQ7LBC6 1761 aa18.04■□□□□ 0.48
R3HDM4-207ENST00000591829 LY75O60449 1722 aa18.04■□□□□ 0.48
R3HDM4-207ENST00000591829 SLC27A3Q5K4L6 730 aa18.04■□□□□ 0.48
R3HDM4-207ENST00000591829 FMNL2Q96PY5 1086 aa18.04■□□□□ 0.48
R3HDM4-207ENST00000591829 CCNL1Q9UK58 526 aaPredicted RBP18.04■□□□□ 0.48
R3HDM4-207ENST00000591829 LOC102724428A0A0B4J2F2 783 aa18.03■□□□□ 0.48
R3HDM4-207ENST00000591829 CHL1O00533 1208 aa18.03■□□□□ 0.48
R3HDM4-207ENST00000591829 SIK1P57059 783 aa18.03■□□□□ 0.48
R3HDM4-207ENST00000591829 EN1Q05925 392 aaPredicted RBP18.03■□□□□ 0.48
R3HDM4-207ENST00000591829 GOLGA2Q08379 1002 aa18.03■□□□□ 0.48
R3HDM4-207ENST00000591829 DEFB132Q7Z7B7 95 aa18.03■□□□□ 0.48
R3HDM4-207ENST00000591829 MIS18AQ9NYP9 233 aa18.03■□□□□ 0.48
R3HDM4-207ENST00000591829 UBR2Q8IWV8 1755 aa18.03■□□□□ 0.48
R3HDM4-207ENST00000591829 ZNF521Q96K83 1311 aa18.02■□□□□ 0.48
R3HDM4-207ENST00000591829 PTCD1O75127 700 aaKnown RBP18.02■□□□□ 0.48
R3HDM4-207ENST00000591829 TXNRD1Q16881 649 aa18.02■□□□□ 0.48
R3HDM4-207ENST00000591829 VSIG10Q8N0Z9 540 aa18.02■□□□□ 0.48
R3HDM4-207ENST00000591829 MYH16Q9H6N6 1097 aa18.02■□□□□ 0.48
R3HDM4-207ENST00000591829 KCPQ6ZWJ8 1503 aa18.02■□□□□ 0.47
R3HDM4-207ENST00000591829 ZBED9Q6R2W3 1325 aa18.01■□□□□ 0.47
R3HDM4-207ENST00000591829 SOCS7O14512 581 aa18.01■□□□□ 0.47
R3HDM4-207ENST00000591829 ZNF853P0CG23 659 aa18.01■□□□□ 0.47
R3HDM4-207ENST00000591829 ATP6V1AP38606 617 aa18.01■□□□□ 0.47
R3HDM4-207ENST00000591829 EZH2Q15910 746 aaKnown RBP18.01■□□□□ 0.47
R3HDM4-207ENST00000591829 CAMKK2Q96RR4 588 aa18.01■□□□□ 0.47
R3HDM4-207ENST00000591829 ZNF831Q5JPB2 1677 aa18■□□□□ 0.47
R3HDM4-207ENST00000591829 E9PSI1 815 aa18■□□□□ 0.47
R3HDM4-207ENST00000591829 ZNF496Q96IT1 587 aaPredicted RBP18■□□□□ 0.47
R3HDM4-207ENST00000591829 MBIPQ9NS73 344 aa18■□□□□ 0.47
R3HDM4-207ENST00000591829 HEG1Q9ULI3 1381 aa18■□□□□ 0.47
R3HDM4-207ENST00000591829 KCNQ3O43525 872 aa17.99■□□□□ 0.47
R3HDM4-207ENST00000591829 TEX13AQ9BXU3 409 aaPredicted RBP17.99■□□□□ 0.47
R3HDM4-207ENST00000591829 RREB1Q92766 1687 aa17.99■□□□□ 0.47
R3HDM4-207ENST00000591829 EIF4A1P60842 406 aaKnown RBP17.98■□□□□ 0.47
R3HDM4-207ENST00000591829 CICQ96RK0 1608 aaPredicted RBP17.98■□□□□ 0.47
R3HDM4-207ENST00000591829 SNRPA1P09661 255 aaKnown RBP17.97■□□□□ 0.47
R3HDM4-207ENST00000591829 FANCIQ9NVI1 1328 aa17.97■□□□□ 0.47
R3HDM4-207ENST00000591829 TSR2Q969E8 191 aaKnown RBP17.96■□□□□ 0.47
R3HDM4-207ENST00000591829 C5P01031 1676 aa17.96■□□□□ 0.47
R3HDM4-207ENST00000591829 STARD3NLO95772 234 aa17.95■□□□□ 0.46
R3HDM4-207ENST00000591829 NBPF14Q5TI25 921 aa17.95■□□□□ 0.46
R3HDM4-207ENST00000591829 DNAJC10Q8IXB1 793 aa17.95■□□□□ 0.46
R3HDM4-207ENST00000591829 PROM2Q8N271 834 aa17.95■□□□□ 0.46
R3HDM4-207ENST00000591829 YTHDC1Q96MU7 727 aaKnown RBP17.95■□□□□ 0.46
R3HDM4-207ENST00000591829 CHMP4AQ9BY43 222 aa17.95■□□□□ 0.46
R3HDM4-207ENST00000591829 SOS1Q07889 1333 aaPredicted RBP17.95■□□□□ 0.46
R3HDM4-207ENST00000591829 TJP1Q07157 1748 aa17.95■□□□□ 0.46
R3HDM4-207ENST00000591829 NUP188Q5SRE5 1749 aa17.95■□□□□ 0.46
R3HDM4-207ENST00000591829 TAF1LQ8IZX4 1826 aa17.94■□□□□ 0.46
R3HDM4-207ENST00000591829 GIGYF1O75420 1035 aaPredicted RBP17.94■□□□□ 0.46
R3HDM4-207ENST00000591829 HOXB7P09629 217 aa17.94■□□□□ 0.46
R3HDM4-207ENST00000591829 SLFN5Q08AF3 891 aa17.94■□□□□ 0.46
R3HDM4-207ENST00000591829 SLC4A9Q96Q91 983 aa17.94■□□□□ 0.46
R3HDM4-207ENST00000591829 LRRC4BQ9NT99 713 aa17.94■□□□□ 0.46
R3HDM4-207ENST00000591829 LAMB4A4D0S4 1761 aa17.94■□□□□ 0.46
R3HDM4-207ENST00000591829 COL5A3P25940 1745 aaPredicted RBP17.93■□□□□ 0.46
R3HDM4-207ENST00000591829 ITPK1Q13572 414 aa17.93■□□□□ 0.46
R3HDM4-207ENST00000591829 KCNQ4P56696 695 aa17.92■□□□□ 0.46
R3HDM4-207ENST00000591829 LINC00116Q8NCU8 138 aa17.92■□□□□ 0.46
R3HDM4-207ENST00000591829 AK7Q96M32 723 aa17.92■□□□□ 0.46
R3HDM4-207ENST00000591829 SPINK5Q9NQ38 1064 aaPredicted RBP17.92■□□□□ 0.46
R3HDM4-207ENST00000591829 STK32BQ9NY57 414 aa17.92■□□□□ 0.46
R3HDM4-207ENST00000591829 CNTNAP4Q9C0A0 1308 aa17.92■□□□□ 0.46
R3HDM4-207ENST00000591829 C4BP0C0L5 1744 aa17.92■□□□□ 0.46
R3HDM4-207ENST00000591829 DUSP27Q5VZP5 1158 aa17.91■□□□□ 0.46
R3HDM4-207ENST00000591829 CDCA7LQ96GN5 454 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms